; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS012180 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012180
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontranscription factor bHLH84
Genome locationscaffold797:177156..179117
RNA-Seq ExpressionMS012180
SyntenyMS012180
Gene Ontology termsGO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571924.1 Transcription factor basic helix-loop-helix 84, partial [Cucurbita argyrosperma subsp. sororia]2.0e-8066.01Show/hide
Query:  WSSLSGTCTA--EEAAFMAQLLNPPPPLIAAHHHESASYCSP----SFYRLSQESSEFIGGSQSQCSHLLFP-TENNCY-------------IGDLG--N
        WSSL+GT TA  EEA F+AQL  PP P +A  H      C P    SFYR+SQESSEF GG  S CS LLF  +ENN +             +G+LG  N
Subjt:  WSSLSGTCTA--EEAAFMAQLLNPPPPLIAAHHHESASYCSP----SFYRLSQESSEFIGGSQSQCSHLLFP-TENNCY-------------IGDLG--N

Query:  NGGFHLEDEDCNLQGYCEPELTNLEAAMEEEEHNQLQLENSKKRSWGSGEVQKRRNERSKKTQKLTSNSNSEDG-NAGPSRQSTSNYCSEDESNASQEPN
        NGGFHL+D + ++         N+EAA+EEE HN  Q  + KKRS G G+  KRRNE+SKKTQKL +    EDG NA  +RQSTS+YCSEDESNAS E N
Subjt:  NGGFHLEDEDCNLQGYCEPELTNLEAAMEEEEHNQLQLENSKKRSWGSGEVQKRRNERSKKTQKLTSNSNSEDG-NAGPSRQSTSNYCSEDESNASQEPN

Query:  GGANNSRSSPKGPTKSRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDLRLNP
        GG NNS  SP G TKSRASRGSATDPQSLYARKRRERINERLKILQ+LVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMD+ LNP
Subjt:  GGANNSRSSPKGPTKSRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDLRLNP

Query:  TPITPK
        TP TPK
Subjt:  TPITPK

XP_022148846.1 transcription factor bHLH84 [Momordica charantia]1.4e-15098.6Show/hide
Query:  WSSLSGTCTAEEAAFMAQLLN-PPPPLIAAHHHESASYCSPSFYRLSQESSEFIGGSQSQCSHLLFPTENNCYIGDLGNNGGFHLEDEDCNLQGYCEPEL
        WSSLSGTCTAEEAAFMAQLLN PPPPLIAAHHHESASYCSPSFYRLSQESSEF GGSQSQCSHLLFPTENNCYIGD GNNGGFHLEDEDCNLQGYCEPEL
Subjt:  WSSLSGTCTAEEAAFMAQLLN-PPPPLIAAHHHESASYCSPSFYRLSQESSEFIGGSQSQCSHLLFPTENNCYIGDLGNNGGFHLEDEDCNLQGYCEPEL

Query:  TNLEAAMEEEEHNQLQLENSKKRSWGSGEVQKRRNERSKKTQKLTSNSNSEDGNAGPSRQSTSNYCSEDESNASQEPNGGANNSRSSPKGPTKSRASRGS
        TNLEAAMEEEEHNQLQLENSKKRSWGSGEVQKRRNERSKKTQKLTSNSNSEDGNAGPSRQSTSNYCSEDESNASQEPNGGANNSRSSPKGPTKSRASRGS
Subjt:  TNLEAAMEEEEHNQLQLENSKKRSWGSGEVQKRRNERSKKTQKLTSNSNSEDGNAGPSRQSTSNYCSEDESNASQEPNGGANNSRSSPKGPTKSRASRGS

Query:  ATDPQSLYARKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDLRLNPTPITPKES
        ATDPQSLYARKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFL+LQIKLLSSDDLWMYAPIAYNGMDLRLNPTPITPKES
Subjt:  ATDPQSLYARKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDLRLNPTPITPKES

XP_022953029.1 transcription factor bHLH85-like [Cucurbita moschata]6.9e-8165.25Show/hide
Query:  WSSLSGTCTA--EEAAFMAQLLNPPPPLIAAHHHESASYCSP----SFYRLSQESSEFIGGSQSQCSHLLF-------------PTENNCY-IGDLG-NN
        WSSL+G  TA  EEA F+AQL  PP P +A  H      C P    SFYR+SQESSEF GG  S CS LLF             P +N+ + +G+LG NN
Subjt:  WSSLSGTCTA--EEAAFMAQLLNPPPPLIAAHHHESASYCSP----SFYRLSQESSEFIGGSQSQCSHLLF-------------PTENNCY-IGDLG-NN

Query:  GGFHLEDEDCNLQGYCEPELTNLEAAMEEEEHNQLQLENSKKRSWGSGEVQKRRNERSKKTQKLTSNSNSEDG-NAGPSRQSTSNYCSEDESNASQEPNG
        GGF LED + ++         N+EA + EE  N   + N KKRS G G++QKRRNE+SKKTQKL +    EDG NA  +RQSTS+YCSEDESNAS E NG
Subjt:  GGFHLEDEDCNLQGYCEPELTNLEAAMEEEEHNQLQLENSKKRSWGSGEVQKRRNERSKKTQKLTSNSNSEDG-NAGPSRQSTSNYCSEDESNASQEPNG

Query:  GANNSRSSPKGPTKSRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDLRLNPT
        G NNS  SP GPTKSRASRGSATDPQSLYARKRRERINERLKILQ+LVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMD+ LNPT
Subjt:  GANNSRSSPKGPTKSRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDLRLNPT

Query:  PITPK
        P TPK
Subjt:  PITPK

XP_022972549.1 transcription factor bHLH139-like [Cucurbita maxima]7.0e-7367.92Show/hide
Query:  CSPSFYRLSQESSEFIGGSQSQCSHLLF---------------PTENNCY-IGDLG--NNGGFHLEDEDCNLQGYCEPELTNLEAAMEEEEHNQLQLENS
        CS SFYR+SQESSEF GG  S CS LLF               P +N+ + +G+LG  NNGGF LED + ++         N+EA + EE  N   + N 
Subjt:  CSPSFYRLSQESSEFIGGSQSQCSHLLF---------------PTENNCY-IGDLG--NNGGFHLEDEDCNLQGYCEPELTNLEAAMEEEEHNQLQLENS

Query:  KKRSWGSGEVQKRRNERSKKTQKLTSNSNSEDG-NAGPSRQSTSNYCSEDESNASQEPNGGANNSRSSPKGPTKSRASRGSATDPQSLYARKRRERINER
        KKRS GSG++QKRRNE+SKKTQKL +    EDG NA  +RQSTS+YCSEDESNAS E NGG NNS  SP GPTKSRASRGSATDPQSLYAR+RRERINER
Subjt:  KKRSWGSGEVQKRRNERSKKTQKLTSNSNSEDG-NAGPSRQSTSNYCSEDESNASQEPNGGANNSRSSPKGPTKSRASRGSATDPQSLYARKRRERINER

Query:  LKILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDLRLNPTPITPK
        LKILQ+LVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMD+ LNPTP TPK
Subjt:  LKILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDLRLNPTPITPK

XP_023511608.1 transcription factor bHLH85-like [Cucurbita pepo subsp. pepo]2.4e-8165.03Show/hide
Query:  WSSLSGTCTA--EEAAFMAQLLNPPPPLIAAHHHESASYCSP----SFYRLSQESSEFIGGSQSQCSHLLF-------------PTENNCY-IGDLG--N
        WSSL+G  TA  EEA F+AQL  PP P +A  H      C P    SFYR+SQESSEF GG  S CS LLF             P +N+ + +G+LG  N
Subjt:  WSSLSGTCTA--EEAAFMAQLLNPPPPLIAAHHHESASYCSP----SFYRLSQESSEFIGGSQSQCSHLLF-------------PTENNCY-IGDLG--N

Query:  NGGFHLEDEDCNLQGYCEPELTNLEAAMEEEEHNQLQLENSKKRSWGSGEVQKRRNERSKKTQKLTSNSNSEDG-NAGPSRQSTSNYCSEDESNASQEPN
        NGGFHLED + ++         N+EA + EE  N L + N+KKRS G G++QKRRNE+SKKTQKL +    EDG NA  +RQSTS+YCSEDESNAS E N
Subjt:  NGGFHLEDEDCNLQGYCEPELTNLEAAMEEEEHNQLQLENSKKRSWGSGEVQKRRNERSKKTQKLTSNSNSEDG-NAGPSRQSTSNYCSEDESNASQEPN

Query:  GGANNSRSSPKGPTKSRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDLRLNP
        GG NNS  SP  PTKSRASRGSATDPQSLYAR+RRERINERLKILQ+LVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMD+ LNP
Subjt:  GGANNSRSSPKGPTKSRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDLRLNP

Query:  TPITPK
        TP TPK
Subjt:  TPITPK

TrEMBL top hitse value%identityAlignment
A0A6J1D6L1 transcription factor bHLH846.9e-15198.6Show/hide
Query:  WSSLSGTCTAEEAAFMAQLLN-PPPPLIAAHHHESASYCSPSFYRLSQESSEFIGGSQSQCSHLLFPTENNCYIGDLGNNGGFHLEDEDCNLQGYCEPEL
        WSSLSGTCTAEEAAFMAQLLN PPPPLIAAHHHESASYCSPSFYRLSQESSEF GGSQSQCSHLLFPTENNCYIGD GNNGGFHLEDEDCNLQGYCEPEL
Subjt:  WSSLSGTCTAEEAAFMAQLLN-PPPPLIAAHHHESASYCSPSFYRLSQESSEFIGGSQSQCSHLLFPTENNCYIGDLGNNGGFHLEDEDCNLQGYCEPEL

Query:  TNLEAAMEEEEHNQLQLENSKKRSWGSGEVQKRRNERSKKTQKLTSNSNSEDGNAGPSRQSTSNYCSEDESNASQEPNGGANNSRSSPKGPTKSRASRGS
        TNLEAAMEEEEHNQLQLENSKKRSWGSGEVQKRRNERSKKTQKLTSNSNSEDGNAGPSRQSTSNYCSEDESNASQEPNGGANNSRSSPKGPTKSRASRGS
Subjt:  TNLEAAMEEEEHNQLQLENSKKRSWGSGEVQKRRNERSKKTQKLTSNSNSEDGNAGPSRQSTSNYCSEDESNASQEPNGGANNSRSSPKGPTKSRASRGS

Query:  ATDPQSLYARKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDLRLNPTPITPKES
        ATDPQSLYARKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFL+LQIKLLSSDDLWMYAPIAYNGMDLRLNPTPITPKES
Subjt:  ATDPQSLYARKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDLRLNPTPITPKES

A0A6J1EIT4 transcription factor bHLH139-like2.5e-6873.76Show/hide
Query:  NCYIGDLG--NNGGFHLEDEDCNLQGYCEPELTNL---EAAMEEEEHNQLQLENSKKRSWGSGEVQKRRNERSKKTQKLTSNSNSED-GNAGPSRQSTSN
        N  +G+LG  NNGGF+LE+ED NLQ   E EL  L   EAAME++ H QL++ N KKRS GS +V+K+ NERSKKTQKLTS+SN+E+ GNA  S+QSTSN
Subjt:  NCYIGDLG--NNGGFHLEDEDCNLQGYCEPELTNL---EAAMEEEEHNQLQLENSKKRSWGSGEVQKRRNERSKKTQKLTSNSNSED-GNAGPSRQSTSN

Query:  YCSEDESNASQEPNGGANNSRSSPKGPTKSRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMY
        YCSEDES AS E     NNSRS+PK  TK+RASRGSATDPQSLYAR+RRERINERLKILQ+LVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMY
Subjt:  YCSEDESNASQEPNGGANNSRSSPKGPTKSRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMY

Query:  APIAYNGMDLRLNPTPITPKE
        APIAYNGMD+ LN +P T KE
Subjt:  APIAYNGMDLRLNPTPITPKE

A0A6J1GNG8 transcription factor bHLH85-like3.4e-8165.25Show/hide
Query:  WSSLSGTCTA--EEAAFMAQLLNPPPPLIAAHHHESASYCSP----SFYRLSQESSEFIGGSQSQCSHLLF-------------PTENNCY-IGDLG-NN
        WSSL+G  TA  EEA F+AQL  PP P +A  H      C P    SFYR+SQESSEF GG  S CS LLF             P +N+ + +G+LG NN
Subjt:  WSSLSGTCTA--EEAAFMAQLLNPPPPLIAAHHHESASYCSP----SFYRLSQESSEFIGGSQSQCSHLLF-------------PTENNCY-IGDLG-NN

Query:  GGFHLEDEDCNLQGYCEPELTNLEAAMEEEEHNQLQLENSKKRSWGSGEVQKRRNERSKKTQKLTSNSNSEDG-NAGPSRQSTSNYCSEDESNASQEPNG
        GGF LED + ++         N+EA + EE  N   + N KKRS G G++QKRRNE+SKKTQKL +    EDG NA  +RQSTS+YCSEDESNAS E NG
Subjt:  GGFHLEDEDCNLQGYCEPELTNLEAAMEEEEHNQLQLENSKKRSWGSGEVQKRRNERSKKTQKLTSNSNSEDG-NAGPSRQSTSNYCSEDESNASQEPNG

Query:  GANNSRSSPKGPTKSRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDLRLNPT
        G NNS  SP GPTKSRASRGSATDPQSLYARKRRERINERLKILQ+LVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMD+ LNPT
Subjt:  GANNSRSSPKGPTKSRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDLRLNPT

Query:  PITPK
        P TPK
Subjt:  PITPK

A0A6J1IBW7 transcription factor bHLH139-like3.4e-7367.92Show/hide
Query:  CSPSFYRLSQESSEFIGGSQSQCSHLLF---------------PTENNCY-IGDLG--NNGGFHLEDEDCNLQGYCEPELTNLEAAMEEEEHNQLQLENS
        CS SFYR+SQESSEF GG  S CS LLF               P +N+ + +G+LG  NNGGF LED + ++         N+EA + EE  N   + N 
Subjt:  CSPSFYRLSQESSEFIGGSQSQCSHLLF---------------PTENNCY-IGDLG--NNGGFHLEDEDCNLQGYCEPELTNLEAAMEEEEHNQLQLENS

Query:  KKRSWGSGEVQKRRNERSKKTQKLTSNSNSEDG-NAGPSRQSTSNYCSEDESNASQEPNGGANNSRSSPKGPTKSRASRGSATDPQSLYARKRRERINER
        KKRS GSG++QKRRNE+SKKTQKL +    EDG NA  +RQSTS+YCSEDESNAS E NGG NNS  SP GPTKSRASRGSATDPQSLYAR+RRERINER
Subjt:  KKRSWGSGEVQKRRNERSKKTQKLTSNSNSEDG-NAGPSRQSTSNYCSEDESNASQEPNGGANNSRSSPKGPTKSRASRGSATDPQSLYARKRRERINER

Query:  LKILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDLRLNPTPITPK
        LKILQ+LVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMD+ LNPTP TPK
Subjt:  LKILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDLRLNPTPITPK

A0A6J1JMX8 transcription factor bHLH85-like8.6e-6974.21Show/hide
Query:  NCYIGDLG--NNGGFHLEDEDCNLQGYCEPELTNL---EAAMEEEEHNQLQLENSKKRSWGSGEVQKRRNERSKKTQKLTSNSNSED-GNAGPSRQSTSN
        N  +G+LG  NNGGF+LE+ED NLQ   E EL  L   E AME++ H QLQ+ N  KRS GS +V+K+ NERSKKTQKLTS+SN+E+ GNA  S+QSTSN
Subjt:  NCYIGDLG--NNGGFHLEDEDCNLQGYCEPELTNL---EAAMEEEEHNQLQLENSKKRSWGSGEVQKRRNERSKKTQKLTSNSNSED-GNAGPSRQSTSN

Query:  YCSEDESNASQEPNGGANNSRSSPKGPTKSRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMY
        YCSEDESNAS E     NNSRS+PK  TK+RASRGSATDPQSLYAR+RRERINERLKILQ+LVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMY
Subjt:  YCSEDESNASQEPNGGANNSRSSPKGPTKSRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMY

Query:  APIAYNGMDLRLNPTPITPKE
        APIAYNGMD+ LN TP T KE
Subjt:  APIAYNGMDLRLNPTPITPKE

SwissProt top hitse value%identityAlignment
Q2QQ32 Transcription factor BHLH1331.6e-2472.73Show/hide
Query:  SATDPQSLYARKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDLRL
        SA   QS YA+ RR+RINERL+ILQ L+PNGTKVDISTMLEEA+QYVKFL LQIKLLSSD++WMYAP+A++  + RL
Subjt:  SATDPQSLYARKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDLRL

Q3E7L7 Transcription factor bHLH1391.1e-3161.54Show/hide
Query:  RSKKTQKLTSNSN--SEDGNAGPSRQSTSNYCSEDESNASQEPNGGANNSRSSPKGPTKSRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVD
        + +K QKL+S SN  +E   A    QS S+Y S D+  A     G  +N+  S K   K++A+RG A+DPQSLYARKRRERIN+RLK LQSLVPNGTKVD
Subjt:  RSKKTQKLTSNSN--SEDGNAGPSRQSTSNYCSEDESNASQEPNGGANNSRSSPKGPTKSRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVD

Query:  ISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDLRLN
        ISTMLE+AV YVKFLQLQIKLLSS+DLWMYAP+A+NG+++ L+
Subjt:  ISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDLRLN

Q7XHI9 Transcription factor bHLH849.5e-4141.8Show/hide
Query:  WSSLSGTCTAEEAAFMAQLL-----------NPPPPLIAAHHHESASYCSPSFYRLSQESSEFIGGSQSQCSHLLFPTENNCYIGDLGNNGGFHL---ED
        WS+  G    EEA FM QLL           +     + A+HH+ + +     +  SQESS + G     C+ +    E+N  + D   N   +L   E 
Subjt:  WSSLSGTCTAEEAAFMAQLL-----------NPPPPLIAAHHHESASYCSPSFYRLSQESSEFIGGSQSQCSHLLFPTENNCYIGDLGNNGGFHL---ED

Query:  EDCNLQGYCEPELTNLEAAMEEEEHNQLQLEN----------------SKKRSWGSGEVQKRRNERSKKTQKLTSNSNSEDGNAGPSR------------
         +C+   Y    L  LE   E  +H+ LQ EN                SKKR+  +   + +R  +++++QK    S  E+ N+G               
Subjt:  EDCNLQGYCEPELTNLEAAMEEEEHNQLQLEN----------------SKKRSWGSGEVQKRRNERSKKTQKLTSNSNSEDGNAGPSR------------

Query:  --QSTSNYCSEDESNASQ---EPNGGANNSRSSPKGPTKSRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIK
          +     CS+DESN          G ++   +  G  K+RASRG+ATDPQSLYARKRRERINERL+ILQ LVPNGTKVDISTMLEEAVQYVKFLQLQIK
Subjt:  --QSTSNYCSEDESNASQ---EPNGGANNSRSSPKGPTKSRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIK

Query:  LLSSDDLWMYAPIAYNGMDLRLN
        LLSSDDLWMYAPIAYNGMD+ L+
Subjt:  LLSSDDLWMYAPIAYNGMDLRLN

Q84WK0 Transcription factor RSL23.4e-3841.89Show/hide
Query:  IAAHHHESASYCSPSFYRLSQESSEFIGGSQSQCSHLLFPT--ENNCYIGDLG------NNGGFHLEDE--DCNLQGYCEPE-LTNLEAAME--EEEHNQ
        + +HH+  +       +  SQESS +  G+    + ++ PT  EN     D G      N   + + +E  +C+++ Y   + L  LE  +E  ++E + 
Subjt:  IAAHHHESASYCSPSFYRLSQESSEFIGGSQSQCSHLLFPT--ENNCYIGDLG------NNGGFHLEDE--DCNLQGYCEPE-LTNLEAAME--EEEHNQ

Query:  LQ----------LENSKKRSWGSGEVQKRR---NERSKKTQKLTSNSNSEDGNAGPSR-------------QSTSNYCSEDESNASQEPNGGANNSRSSP
        LQ          L  SKKRS  +   + +R   N+R++K  +++ ++N  +   G ++              S++ +C+E+ESN + + +GG  +S S  
Subjt:  LQ----------LENSKKRSWGSGEVQKRR---NERSKKTQKLTSNSNSEDGNAGPSR-------------QSTSNYCSEDESNASQEPNGGANNSRSSP

Query:  KGPT-------KSRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDLRLN
          P+       K+RASRG+ATDPQSLYARKRRERINERL+ILQ+LVPNGTKVDISTMLEEAV YVKFLQLQIKLLSSDDLWMYAPIA+NGMD+ L+
Subjt:  KGPT-------KSRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDLRLN

Q8LEG1 Transcription factor RSL34.7e-3257.76Show/hide
Query:  LQLENSKKRSWGSGEVQKRRNERSKKTQKLTSNSNSEDGNAGPSRQSTSNYC-SEDESNASQEPNGGANNSRSSPKGPTKSRASRGSATDPQSLYARKRR
        L +EN  K +  + +V ++   +SKK Q+++S SN+ D       +S +N+   +  SN+S +       S +S KG  K+RA++G+ATDPQSLYARKRR
Subjt:  LQLENSKKRSWGSGEVQKRRNERSKKTQKLTSNSNSEDGNAGPSRQSTSNYC-SEDESNASQEPNGGANNSRSSPKGPTKSRASRGSATDPQSLYARKRR

Query:  ERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDL
        E+INERLK LQ+LVPNGTKVDISTMLEEAV YVKFLQLQIKLLSSDDLWMYAP+AYNG+D+
Subjt:  ERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDL

Arabidopsis top hitse value%identityAlignment
AT1G27740.1 root hair defective 6-like 43.4e-3357.76Show/hide
Query:  LQLENSKKRSWGSGEVQKRRNERSKKTQKLTSNSNSEDGNAGPSRQSTSNYC-SEDESNASQEPNGGANNSRSSPKGPTKSRASRGSATDPQSLYARKRR
        L +EN  K +  + +V ++   +SKK Q+++S SN+ D       +S +N+   +  SN+S +       S +S KG  K+RA++G+ATDPQSLYARKRR
Subjt:  LQLENSKKRSWGSGEVQKRRNERSKKTQKLTSNSNSEDGNAGPSRQSTSNYC-SEDESNASQEPNGGANNSRSSPKGPTKSRASRGSATDPQSLYARKRR

Query:  ERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDL
        E+INERLK LQ+LVPNGTKVDISTMLEEAV YVKFLQLQIKLLSSDDLWMYAP+AYNG+D+
Subjt:  ERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDL

AT2G14760.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein6.8e-4241.8Show/hide
Query:  WSSLSGTCTAEEAAFMAQLL-----------NPPPPLIAAHHHESASYCSPSFYRLSQESSEFIGGSQSQCSHLLFPTENNCYIGDLGNNGGFHL---ED
        WS+  G    EEA FM QLL           +     + A+HH+ + +     +  SQESS + G     C+ +    E+N  + D   N   +L   E 
Subjt:  WSSLSGTCTAEEAAFMAQLL-----------NPPPPLIAAHHHESASYCSPSFYRLSQESSEFIGGSQSQCSHLLFPTENNCYIGDLGNNGGFHL---ED

Query:  EDCNLQGYCEPELTNLEAAMEEEEHNQLQLEN----------------SKKRSWGSGEVQKRRNERSKKTQKLTSNSNSEDGNAGPSR------------
         +C+   Y    L  LE   E  +H+ LQ EN                SKKR+  +   + +R  +++++QK    S  E+ N+G               
Subjt:  EDCNLQGYCEPELTNLEAAMEEEEHNQLQLEN----------------SKKRSWGSGEVQKRRNERSKKTQKLTSNSNSEDGNAGPSR------------

Query:  --QSTSNYCSEDESNASQ---EPNGGANNSRSSPKGPTKSRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIK
          +     CS+DESN          G ++   +  G  K+RASRG+ATDPQSLYARKRRERINERL+ILQ LVPNGTKVDISTMLEEAVQYVKFLQLQIK
Subjt:  --QSTSNYCSEDESNASQ---EPNGGANNSRSSPKGPTKSRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIK

Query:  LLSSDDLWMYAPIAYNGMDLRLN
        LLSSDDLWMYAPIAYNGMD+ L+
Subjt:  LLSSDDLWMYAPIAYNGMDLRLN

AT2G14760.3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein4.1e-3940.18Show/hide
Query:  WSSLSGTCTAEEAAFMAQLL-----------NPPPPLIAAHHHESASYCSPSFYRLSQESSEFIGGSQSQCSHLLFPTENNCYIGDLGNNGGFHL---ED
        WS+  G    EEA FM QLL           +     + A+HH+ + +     +  SQESS + G     C+ +    E+N  + D   N   +L   E 
Subjt:  WSSLSGTCTAEEAAFMAQLL-----------NPPPPLIAAHHHESASYCSPSFYRLSQESSEFIGGSQSQCSHLLFPTENNCYIGDLGNNGGFHL---ED

Query:  EDCNLQGYCEPELTNLEAAMEEEEHNQLQLEN----------------SKKRSWGSGEVQKRRNERSKKTQKLTSNSNSEDGNAGPSR------------
         +C+   Y    L  LE   E  +H+ LQ EN                SKKR+  +   + +R  +++++QK    S  E+ N+G               
Subjt:  EDCNLQGYCEPELTNLEAAMEEEEHNQLQLEN----------------SKKRSWGSGEVQKRRNERSKKTQKLTSNSNSEDGNAGPSR------------

Query:  --QSTSNYCSEDESNASQ---EPNGGANNSRSSPKGPTKSRASRGSATDPQSLYAR-------------KRRERINERLKILQSLVPNGTKVDISTMLEE
          +     CS+DESN          G ++   +  G  K+RASRG+ATDPQSLYAR             KRRERINERL+ILQ LVPNGTKVDISTMLEE
Subjt:  --QSTSNYCSEDESNASQ---EPNGGANNSRSSPKGPTKSRASRGSATDPQSLYAR-------------KRRERINERLKILQSLVPNGTKVDISTMLEE

Query:  AVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDLRLN
        AVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMD+ L+
Subjt:  AVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDLRLN

AT4G33880.1 ROOT HAIR DEFECTIVE 6-LIKE 22.4e-3941.89Show/hide
Query:  IAAHHHESASYCSPSFYRLSQESSEFIGGSQSQCSHLLFPT--ENNCYIGDLG------NNGGFHLEDE--DCNLQGYCEPE-LTNLEAAME--EEEHNQ
        + +HH+  +       +  SQESS +  G+    + ++ PT  EN     D G      N   + + +E  +C+++ Y   + L  LE  +E  ++E + 
Subjt:  IAAHHHESASYCSPSFYRLSQESSEFIGGSQSQCSHLLFPT--ENNCYIGDLG------NNGGFHLEDE--DCNLQGYCEPE-LTNLEAAME--EEEHNQ

Query:  LQ----------LENSKKRSWGSGEVQKRR---NERSKKTQKLTSNSNSEDGNAGPSR-------------QSTSNYCSEDESNASQEPNGGANNSRSSP
        LQ          L  SKKRS  +   + +R   N+R++K  +++ ++N  +   G ++              S++ +C+E+ESN + + +GG  +S S  
Subjt:  LQ----------LENSKKRSWGSGEVQKRR---NERSKKTQKLTSNSNSEDGNAGPSR-------------QSTSNYCSEDESNASQEPNGGANNSRSSP

Query:  KGPT-------KSRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDLRLN
          P+       K+RASRG+ATDPQSLYARKRRERINERL+ILQ+LVPNGTKVDISTMLEEAV YVKFLQLQIKLLSSDDLWMYAPIA+NGMD+ L+
Subjt:  KGPT-------KSRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDLRLN

AT5G43175.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein7.5e-3361.54Show/hide
Query:  RSKKTQKLTSNSN--SEDGNAGPSRQSTSNYCSEDESNASQEPNGGANNSRSSPKGPTKSRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVD
        + +K QKL+S SN  +E   A    QS S+Y S D+  A     G  +N+  S K   K++A+RG A+DPQSLYARKRRERIN+RLK LQSLVPNGTKVD
Subjt:  RSKKTQKLTSNSN--SEDGNAGPSRQSTSNYCSEDESNASQEPNGGANNSRSSPKGPTKSRASRGSATDPQSLYARKRRERINERLKILQSLVPNGTKVD

Query:  ISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDLRLN
        ISTMLE+AV YVKFLQLQIKLLSS+DLWMYAP+A+NG+++ L+
Subjt:  ISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDLRLN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGAGCTCTCTCAGTGGAACCTGCACAGCTGAGGAAGCAGCTTTCATGGCTCAACTTCTCAATCCTCCTCCTCCTTTAATCGCTGCCCATCACCATGAATCTGCTTCCTA
TTGTTCTCCAAGCTTCTACAGGCTTTCTCAAGAGAGCAGTGAGTTCATTGGTGGAAGCCAGAGCCAATGCAGCCATTTATTGTTCCCCACTGAGAATAATTGCTACATTG
GAGACCTTGGAAACAATGGCGGCTTCCATCTTGAAGATGAGGACTGTAACTTGCAGGGCTATTGTGAACCTGAGTTGACAAACTTAGAAGCTGCCATGGAAGAGGAGGAG
CACAACCAGCTTCAGCTTGAGAATTCCAAGAAAAGATCTTGGGGATCTGGGGAAGTACAAAAGAGGAGGAATGAGAGGTCAAAGAAAACTCAGAAGCTTACCTCAAACAG
TAACTCTGAAGATGGCAATGCTGGCCCTAGCAGGCAAAGCACAAGCAACTATTGCTCGGAAGACGAATCCAACGCCTCTCAGGAGCCAAACGGAGGTGCTAACAACTCGA
GATCGAGTCCGAAAGGGCCGACCAAGTCCCGAGCCAGCAGAGGCTCTGCTACAGATCCACAGAGCCTCTATGCAAGGAAAAGAAGAGAAAGAATCAATGAGAGGTTGAAA
ATCTTACAGAGCCTTGTCCCAAATGGAACAAAAGTTGATATCAGCACAATGCTTGAGGAAGCCGTTCAATATGTCAAATTTCTACAACTCCAAATCAAGCTATTAAGCTC
CGACGATTTATGGATGTATGCTCCGATCGCTTATAACGGAATGGATCTCCGACTTAACCCGACCCCGATCACACCAAAAGAATCA
mRNA sequenceShow/hide mRNA sequence
TGGAGCTCTCTCAGTGGAACCTGCACAGCTGAGGAAGCAGCTTTCATGGCTCAACTTCTCAATCCTCCTCCTCCTTTAATCGCTGCCCATCACCATGAATCTGCTTCCTA
TTGTTCTCCAAGCTTCTACAGGCTTTCTCAAGAGAGCAGTGAGTTCATTGGTGGAAGCCAGAGCCAATGCAGCCATTTATTGTTCCCCACTGAGAATAATTGCTACATTG
GAGACCTTGGAAACAATGGCGGCTTCCATCTTGAAGATGAGGACTGTAACTTGCAGGGCTATTGTGAACCTGAGTTGACAAACTTAGAAGCTGCCATGGAAGAGGAGGAG
CACAACCAGCTTCAGCTTGAGAATTCCAAGAAAAGATCTTGGGGATCTGGGGAAGTACAAAAGAGGAGGAATGAGAGGTCAAAGAAAACTCAGAAGCTTACCTCAAACAG
TAACTCTGAAGATGGCAATGCTGGCCCTAGCAGGCAAAGCACAAGCAACTATTGCTCGGAAGACGAATCCAACGCCTCTCAGGAGCCAAACGGAGGTGCTAACAACTCGA
GATCGAGTCCGAAAGGGCCGACCAAGTCCCGAGCCAGCAGAGGCTCTGCTACAGATCCACAGAGCCTCTATGCAAGGAAAAGAAGAGAAAGAATCAATGAGAGGTTGAAA
ATCTTACAGAGCCTTGTCCCAAATGGAACAAAAGTTGATATCAGCACAATGCTTGAGGAAGCCGTTCAATATGTCAAATTTCTACAACTCCAAATCAAGCTATTAAGCTC
CGACGATTTATGGATGTATGCTCCGATCGCTTATAACGGAATGGATCTCCGACTTAACCCGACCCCGATCACACCAAAAGAATCA
Protein sequenceShow/hide protein sequence
WSSLSGTCTAEEAAFMAQLLNPPPPLIAAHHHESASYCSPSFYRLSQESSEFIGGSQSQCSHLLFPTENNCYIGDLGNNGGFHLEDEDCNLQGYCEPELTNLEAAMEEEE
HNQLQLENSKKRSWGSGEVQKRRNERSKKTQKLTSNSNSEDGNAGPSRQSTSNYCSEDESNASQEPNGGANNSRSSPKGPTKSRASRGSATDPQSLYARKRRERINERLK
ILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDLRLNPTPITPKES