CuGenDBv2

Gene ID	MS012183
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	4HBT domain-containing protein
Genome location	scaffold797:218059..219914
RNA-Seq Expression	MS012183
Synteny	MS012183
Gene Ontology terms	GO:0047617 - acyl-CoA hydrolase activity (molecular function)
InterPro domains	IPR006683 - Thioesterase domain IPR029069 - HotDog domain superfamily IPR039298 - Acyl-coenzyme A thioesterase 13

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008438081.1 PREDICTED: acyl-coenzyme A thioesterase 13 [Cucumis melo]

7.5e-46

74.24

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Query:  CNTKDFHSDVCRRHLRQLRLERRRVTSLLSVKPAICNIFGYLHGGFVAAAAEFLSIACARTVVAEDKQIFLGELSISYLSGAPQNAEVVVDASIIRSGRN
        C+TK F+S + R HLRQLR ER R+T LL VKPA+ NI+GYLHGGFVAAAAEFLSIACARTVV EDK++F+GELSISYLSGAP+NAEVVVDAS++RSGR+
Subjt:  CNTKDFHSDVCRRHLRQLRLERRRVTSLLSVKPAICNIFGYLHGGFVAAAAEFLSIACARTVVAEDKQIFLGELSISYLSGAPQNAEVVVDASIIRSGRN

Query:  LTVVAAEFKLEETKKLVYIARSTFYIMPEARL
        L+VV  EFKL++T KLVY ARST Y MP A+L
Subjt:  LTVVAAEFKLEETKKLVYIARSTFYIMPEARL

XP_022147412.1 uncharacterized protein LOC111016347 [Momordica charantia]

8.8e-55

84.85

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Query:  CNTKDFHSDVCRRHLRQLRLERRRVTSLLSVKPAICNIFGYLHGGFVAAAAEFLSIACARTVVAEDKQIFLGELSISYLSGAPQNAEVVVDASIIRSGRN
        CNTKDFHSD+CRRHLRQLRLER R T LLS +PAICNI+G LHGGFVAAAAEFLSIACARTVVAEDK++FLGELSISYLSGAP NAE+VVDASIIRSGRN
Subjt:  CNTKDFHSDVCRRHLRQLRLERRRVTSLLSVKPAICNIFGYLHGGFVAAAAEFLSIACARTVVAEDKQIFLGELSISYLSGAPQNAEVVVDASIIRSGRN

Query:  LTVVAAEFKLEETKKLVYIARSTFYIMPEARL
        LTVV  EFKL+ETKKL Y+ARST YIMP A+L
Subjt:  LTVVAAEFKLEETKKLVYIARSTFYIMPEARL

XP_022924378.1 acyl-coenzyme A thioesterase 13-like [Cucurbita moschata]

2.8e-45

72.73

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Query:  CNTKDFHSDVCRRHLRQLRLERRRVTSLLSVKPAICNIFGYLHGGFVAAAAEFLSIACARTVVAEDKQIFLGELSISYLSGAPQNAEVVVDASIIRSGRN
        CNTK F+SD+ R HLRQ RLER R+T LLSVKPA+ N +G+LHGGFVAAAAEF SIACARTV+AEDK++FLGELSISYLSGAP NAEV++DASI+RSG++
Subjt:  CNTKDFHSDVCRRHLRQLRLERRRVTSLLSVKPAICNIFGYLHGGFVAAAAEFLSIACARTVVAEDKQIFLGELSISYLSGAPQNAEVVVDASIIRSGRN

Query:  LTVVAAEFKLEETKKLVYIARSTFYIMPEARL
        L VVA +F+L++T KLVY ARST Y MP A+L
Subjt:  LTVVAAEFKLEETKKLVYIARSTFYIMPEARL

XP_023526383.1 acyl-coenzyme A thioesterase 13-like [Cucurbita pepo subsp. pepo]

2.2e-45

71.97

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Query:  CNTKDFHSDVCRRHLRQLRLERRRVTSLLSVKPAICNIFGYLHGGFVAAAAEFLSIACARTVVAEDKQIFLGELSISYLSGAPQNAEVVVDASIIRSGRN
        CNTK F+SD+ R HLRQ RLER R+T LLSVKPA+ N +G+LHGGFVAAAAEF SIACARTV+AEDK++FLGELSISYLSGAP+NAEV++DASI+RSG++
Subjt:  CNTKDFHSDVCRRHLRQLRLERRRVTSLLSVKPAICNIFGYLHGGFVAAAAEFLSIACARTVVAEDKQIFLGELSISYLSGAPQNAEVVVDASIIRSGRN

Query:  LTVVAAEFKLEETKKLVYIARSTFYIMPEARL
        L VVA +F+L++T KL+Y ARST Y MP A+L
Subjt:  LTVVAAEFKLEETKKLVYIARSTFYIMPEARL

XP_038892661.1 uncharacterized protein LOC120081650 isoform X1 [Benincasa hispida]

1.3e-45

72.73

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Query:  CNTKDFHSDVCRRHLRQLRLERRRVTSLLSVKPAICNIFGYLHGGFVAAAAEFLSIACARTVVAEDKQIFLGELSISYLSGAPQNAEVVVDASIIRSGRN
        CNTK F+SD+ R HLRQLRLER  +T LL+VKPA+ NI+G+LHGGFVAAAAEFLSIACARTVV  DK++F+GELSIS+LSGAP NAEVVVDAS++RSGR+
Subjt:  CNTKDFHSDVCRRHLRQLRLERRRVTSLLSVKPAICNIFGYLHGGFVAAAAEFLSIACARTVVAEDKQIFLGELSISYLSGAPQNAEVVVDASIIRSGRN

Query:  LTVVAAEFKLEETKKLVYIARSTFYIMPEARL
        L+VV  EF+L++T KLVY ARST Y MP A+L
Subjt:  LTVVAAEFKLEETKKLVYIARSTFYIMPEARL

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AVH8 acyl-coenzyme A thioesterase 13

3.6e-46

74.24

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Query:  CNTKDFHSDVCRRHLRQLRLERRRVTSLLSVKPAICNIFGYLHGGFVAAAAEFLSIACARTVVAEDKQIFLGELSISYLSGAPQNAEVVVDASIIRSGRN
        C+TK F+S + R HLRQLR ER R+T LL VKPA+ NI+GYLHGGFVAAAAEFLSIACARTVV EDK++F+GELSISYLSGAP+NAEVVVDAS++RSGR+
Subjt:  CNTKDFHSDVCRRHLRQLRLERRRVTSLLSVKPAICNIFGYLHGGFVAAAAEFLSIACARTVVAEDKQIFLGELSISYLSGAPQNAEVVVDASIIRSGRN

Query:  LTVVAAEFKLEETKKLVYIARSTFYIMPEARL
        L+VV  EFKL++T KLVY ARST Y MP A+L
Subjt:  LTVVAAEFKLEETKKLVYIARSTFYIMPEARL

A0A5A7U3Z9 Acyl-coenzyme A thioesterase 13

3.6e-46

74.24

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Query:  CNTKDFHSDVCRRHLRQLRLERRRVTSLLSVKPAICNIFGYLHGGFVAAAAEFLSIACARTVVAEDKQIFLGELSISYLSGAPQNAEVVVDASIIRSGRN
        C+TK F+S + R HLRQLR ER R+T LL VKPA+ NI+GYLHGGFVAAAAEFLSIACARTVV EDK++F+GELSISYLSGAP+NAEVVVDAS++RSGR+
Subjt:  CNTKDFHSDVCRRHLRQLRLERRRVTSLLSVKPAICNIFGYLHGGFVAAAAEFLSIACARTVVAEDKQIFLGELSISYLSGAPQNAEVVVDASIIRSGRN

Query:  LTVVAAEFKLEETKKLVYIARSTFYIMPEARL
        L+VV  EFKL++T KLVY ARST Y MP A+L
Subjt:  LTVVAAEFKLEETKKLVYIARSTFYIMPEARL

A0A6J1D2A8 uncharacterized protein LOC111016347

4.3e-55

84.85

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Query:  CNTKDFHSDVCRRHLRQLRLERRRVTSLLSVKPAICNIFGYLHGGFVAAAAEFLSIACARTVVAEDKQIFLGELSISYLSGAPQNAEVVVDASIIRSGRN
        CNTKDFHSD+CRRHLRQLRLER R T LLS +PAICNI+G LHGGFVAAAAEFLSIACARTVVAEDK++FLGELSISYLSGAP NAE+VVDASIIRSGRN
Subjt:  CNTKDFHSDVCRRHLRQLRLERRRVTSLLSVKPAICNIFGYLHGGFVAAAAEFLSIACARTVVAEDKQIFLGELSISYLSGAPQNAEVVVDASIIRSGRN

Query:  LTVVAAEFKLEETKKLVYIARSTFYIMPEARL
        LTVV  EFKL+ETKKL Y+ARST YIMP A+L
Subjt:  LTVVAAEFKLEETKKLVYIARSTFYIMPEARL

A0A6J1EC92 acyl-coenzyme A thioesterase 13-like

1.4e-45

72.73

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Query:  CNTKDFHSDVCRRHLRQLRLERRRVTSLLSVKPAICNIFGYLHGGFVAAAAEFLSIACARTVVAEDKQIFLGELSISYLSGAPQNAEVVVDASIIRSGRN
        CNTK F+SD+ R HLRQ RLER R+T LLSVKPA+ N +G+LHGGFVAAAAEF SIACARTV+AEDK++FLGELSISYLSGAP NAEV++DASI+RSG++
Subjt:  CNTKDFHSDVCRRHLRQLRLERRRVTSLLSVKPAICNIFGYLHGGFVAAAAEFLSIACARTVVAEDKQIFLGELSISYLSGAPQNAEVVVDASIIRSGRN

Query:  LTVVAAEFKLEETKKLVYIARSTFYIMPEARL
        L VVA +F+L++T KLVY ARST Y MP A+L
Subjt:  LTVVAAEFKLEETKKLVYIARSTFYIMPEARL

A0A6J1F1L3 acyl-coenzyme A thioesterase 13-like

4.0e-45

70.45

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Query:  CNTKDFHSDVCRRHLRQLRLERRRVTSLLSVKPAICNIFGYLHGGFVAAAAEFLSIACARTVVAEDKQIFLGELSISYLSGAPQNAEVVVDASIIRSGRN
        CNT+ F+SD+ R HLRQL LER R+T LL VKP + NI+G+LHGGFVAAAAEF SIACARTV+ EDK +FLGELSISYLSGAPQNAEVVVDAS++RSG++
Subjt:  CNTKDFHSDVCRRHLRQLRLERRRVTSLLSVKPAICNIFGYLHGGFVAAAAEFLSIACARTVVAEDKQIFLGELSISYLSGAPQNAEVVVDASIIRSGRN

Query:  LTVVAAEFKLEETKKLVYIARSTFYIMPEARL
        LT+++ EF+L++T KLVY ARST Y MP  +L
Subjt:  LTVVAAEFKLEETKKLVYIARSTFYIMPEARL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G04290.1 Thioesterase superfamily protein

6.6e-08

26.55

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Query:  LERRRVTSLLSVKPAICNIFGYLHGGFVAAAAEFLSIACARTVVAEDKQIFLGELSISYLSGAPQNAEVVVDASIIRSGRNLTVVAAEFKLEETKKLVYI
        +E  R+   + + P + N   +LHGG  A   + +  A   T  A    + + E+++SYL  A  + E+ +++  +R G+ + VV+ E + + T K++  
Subjt:  LERRRVTSLLSVKPAICNIFGYLHGGFVAAAAEFLSIACARTVVAEDKQIFLGELSISYLSGAPQNAEVVVDASIIRSGRNLTVVAAEFKLEETKKLVYI

Query:  ARSTFYIMPEARL
         R T Y  P + L
Subjt:  ARSTFYIMPEARL

AT3G61200.1 Thioesterase superfamily protein

4.0e-29

47.66

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Query:  DFHSDVCRRHLRQLRLERRRVTSLLSVKPAICNIFGYLHGGFVAAAAEFLSIACARTVVAEDKQIFLGELSISYLSGAPQNAEVVVDASIIRSGRNLTVV
        D  S + + + R L + R RV+  ++V P I N F  LHGG VA+ AE +++AC +TVV+EDK +F+GELS+SYLS AP ++E++V+ +++R+GRNL+VV
Subjt:  DFHSDVCRRHLRQLRLERRRVTSLLSVKPAICNIFGYLHGGFVAAAAEFLSIACARTVVAEDKQIFLGELSISYLSGAPQNAEVVVDASIIRSGRNLTVV

Query:  AAEFKLEETKKLVYIARSTFYIMPEARL
          EFK++ET K+ Y++R+TFY  P ++L
Subjt:  AAEFKLEETKKLVYIARSTFYIMPEARL

Sequences

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CDS sequence

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TGCAACACCAAGGACTTTCATTCCGACGTCTGTCGCCGTCATCTCCGGCAGCTCCGCCTCGAGCGACGCCGTGTCACCTCCCTCCTCTCCGTCAAACCTGCTATTTGCAA
TATTTTTGGCTATTTACATGGAGGGTTTGTTGCTGCGGCTGCTGAGTTCTTATCAATTGCTTGTGCTAGAACTGTGGTGGCGGAGGATAAGCAGATTTTTCTTGGGGAAC
TGAGCATTTCTTATCTCTCAGGGGCTCCACAAAATGCAGAGGTTGTAGTAGATGCTTCCATTATAAGGAGTGGAAGAAATTTGACAGTAGTTGCTGCAGAGTTCAAACTT
GAAGAGACAAAAAAGTTGGTCTACATTGCTCGCTCAACCTTCTACATCATGCCAGAAGCCAGGTTA

mRNA sequence

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Protein sequence

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CNTKDFHSDVCRRHLRQLRLERRRVTSLLSVKPAICNIFGYLHGGFVAAAAEFLSIACARTVVAEDKQIFLGELSISYLSGAPQNAEVVVDASIIRSGRNLTVVAAEFKL
EETKKLVYIARSTFYIMPEARL

MS012183 (gene) of Bitter gourd (TR) v1 genome