; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS012190 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012190
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRING-type domain-containing protein
Genome locationscaffold797:279752..281627
RNA-Seq ExpressionMS012190
SyntenyMS012190
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136947.1 probable E3 ubiquitin-protein ligase RHY1A [Cucumis sativus]8.5e-11077.31Show/hide
Query:  MTSASELFHHRRYRWGRTDADLGLDSEPPDRHLPSPRRHHGHTGTHRRDLNACGAFRRSSLQERHQSPRFSYPLAQDRSAAQSDSVTSIGSRNSINANIH
        MTSASELF+ RRYR+GRTD+DLGLDSEPPDRHL   RRHHGH G HRRDLN+CG FRRSSLQER QSPRF  PL+ DRS AQSDS TS+ SRN+IN N  
Subjt:  MTSASELFHHRRYRWGRTDADLGLDSEPPDRHLPSPRRHHGHTGTHRRDLNACGAFRRSSLQERHQSPRFSYPLAQDRSAAQSDSVTSIGSRNSINANIH

Query:  IRNSSRTGLSGDSRLPGAVLLARERLLERLRGASLPTSRNGLTEASDGNPEISTSQSQRISLVDADRLQLVPELNKRPPGLSQEAVDRLQLEVFMNTEHI
         +NS R+GLSGDSRLPG+VLLARERLLERLRGAS PT+RN L EAS+GNPE +TS+SQRISLVDADR++LV   +KRPPGLSQ+A++RLQLEVF+NT+HI
Subjt:  IRNSSRTGLSGDSRLPGAVLLARERLLERLRGASLPTSRNGLTEASDGNPEISTSQSQRISLVDADRLQLVPELNKRPPGLSQEAVDRLQLEVFMNTEHI

Query:  IDDDPTTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDRWVRSCGDCPYCRQRIDVN
        I+D   TITSTDCSICLESFTDGDKLIHLPCEHKFHH CLDRW+R+CG+CPYCRQ I +N
Subjt:  IDDDPTTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDRWVRSCGDCPYCRQRIDVN

XP_008455026.1 PREDICTED: E3 ubiquitin-protein ligase RLIM [Cucumis melo]3.8e-11078.99Show/hide
Query:  MTSASELFHHRRYRWGRTDADLGLDSEPPDRHLPSPRRHHGHTGTHRRDLNACGAFRRSSLQERHQSPRFSYPLAQDRSAAQSDSVTSIGSRNSINANIH
        MTSASELF+ RRYR+GRTD+DLGLDSEPPDR+L   RRHHGH   HRRDLN+CG FRRSSLQER QSPRF  PL+ DRS AQSDS TS+GSRN+IN N  
Subjt:  MTSASELFHHRRYRWGRTDADLGLDSEPPDRHLPSPRRHHGHTGTHRRDLNACGAFRRSSLQERHQSPRFSYPLAQDRSAAQSDSVTSIGSRNSINANIH

Query:  IRNSSRTGLSGDSRLPGAVLLARERLLERLRGASLPTSRNGLTEASDGNPEISTSQSQRISLVDADRLQLVPELNKRPPGLSQEAVDRLQLEVFMNTEHI
         +NS R+GLSGDSRLPG+VLLARERLLERLRGAS PTSRN L EAS+GNPEISTS+SQRISL+DADR++LV   +KRPPGLSQ+A++RLQLEVF+NT+ I
Subjt:  IRNSSRTGLSGDSRLPGAVLLARERLLERLRGASLPTSRNGLTEASDGNPEISTSQSQRISLVDADRLQLVPELNKRPPGLSQEAVDRLQLEVFMNTEHI

Query:  IDDDPTTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDRWVRSCGDCPYCRQRI
        IDDD  TITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDRW+R+CG+CPYCRQ I
Subjt:  IDDDPTTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDRWVRSCGDCPYCRQRI

XP_022148864.1 probable E3 ubiquitin-protein ligase RHY1A [Momordica charantia]1.8e-14498.85Show/hide
Query:  MTSASELFHHRRYRWGRTDADLGLDSEPPDRHLPSPRRHHGHTGTHRRDLNACGAFRRSSLQERHQSPRFSYPLAQDRSAAQSDSVTSIGSRNSINANIH
        MTSASELFHHRRYRWGRTDADLGLDSEPPDRHLPSPRRHHGHTGTHRRDLNACGAFRRSSLQERHQSPRFSYPLAQDRSAAQSDSVTS+GSRNSINANIH
Subjt:  MTSASELFHHRRYRWGRTDADLGLDSEPPDRHLPSPRRHHGHTGTHRRDLNACGAFRRSSLQERHQSPRFSYPLAQDRSAAQSDSVTSIGSRNSINANIH

Query:  IRNSSRTGLSGDSRLPGAVLLARERLLERLRGASLPTSRNGLTEASDGNPEISTSQSQRISLVDADRLQLVPELNKRPPGLSQEAVDRLQLEVFMNTEHI
        IRNSSRTGLS DSRLPGAVLLARERLLERLRGASLPTSRNGLTEASDGNPEISTSQSQRISLVDADRLQLVPELNKRPPGLS EAVDRLQLEVFMNTEHI
Subjt:  IRNSSRTGLSGDSRLPGAVLLARERLLERLRGASLPTSRNGLTEASDGNPEISTSQSQRISLVDADRLQLVPELNKRPPGLSQEAVDRLQLEVFMNTEHI

Query:  IDDDPTTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDRWVRSCGDCPYCRQRIDVN
        IDDDPTTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDRWVRSCGDCPYCRQRIDVN
Subjt:  IDDDPTTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDRWVRSCGDCPYCRQRIDVN

XP_023529438.1 probable E3 ubiquitin-protein ligase RHY1A [Cucurbita pepo subsp. pepo]9.7e-10677.39Show/hide
Query:  MTSASELFHHRRYRWGRTDADLGLDSEPPDRHLPSPRRHHGHTGTHRRDLNACGAFRRSSLQERHQSPRFSYPLAQDRSAAQSDSVTSIGSRNSINANIH
        MTSASELFH RRYR GRTDADLGLDSEPPDRHL   RRHHGH G HRR LNACGAFRRSSLQER QSPRF  PLA DRS AQS+S  S+GSRN+INAN  
Subjt:  MTSASELFHHRRYRWGRTDADLGLDSEPPDRHLPSPRRHHGHTGTHRRDLNACGAFRRSSLQERHQSPRFSYPLAQDRSAAQSDSVTSIGSRNSINANIH

Query:  IRNSSRTGLSGDSRLPGAVLLARERLLERLRGASLPTSRNGLTEASDGNPEISTSQSQRISLVDADRLQLVPELNKRPPGLSQEAVDRLQLEVFMNTEHI
        I+NS R GLSGDSRLPG+VLLARERL ERLRGAS PT RNGL EA D +PEIS S+SQ ISL DADRL+LVP ++KRPPGLSQEA++ LQLE F++ EHI
Subjt:  IRNSSRTGLSGDSRLPGAVLLARERLLERLRGASLPTSRNGLTEASDGNPEISTSQSQRISLVDADRLQLVPELNKRPPGLSQEAVDRLQLEVFMNTEHI

Query:  IDDDPTTI-TSTDCSICLESFTDGDKLIHLPCEHKFHHACLDRWVRSCGDCPYCRQRIDVN
        IDDD T I TS DCSICL+SF DGDKLIHLPC+HKFHHACL++W+R+CG+CPYCRQRI VN
Subjt:  IDDDPTTI-TSTDCSICLESFTDGDKLIHLPCEHKFHHACLDRWVRSCGDCPYCRQRIDVN

XP_038888994.1 probable E3 ubiquitin-protein ligase RHY1A [Benincasa hispida]9.4e-10977.78Show/hide
Query:  MTSASELFHHRRYRWGRTDADLGLDSEPPDRHLPSPRRHHGHTGTHRRDLNACGAFRRSSLQERHQSPRFSYPLAQDRSAAQSDSVTSIGSRNSINANIH
        MTSASELF+ RRYR GRTDADLGLDSEPPDR+L   RRHHGH   HRRD N+CG FRRSSLQER QSPRF  PL+ DR   QSDSVTS GSRN+IN N  
Subjt:  MTSASELFHHRRYRWGRTDADLGLDSEPPDRHLPSPRRHHGHTGTHRRDLNACGAFRRSSLQERHQSPRFSYPLAQDRSAAQSDSVTSIGSRNSINANIH

Query:  IRNSSRTGLSGDSRLPGAVLLARERLLERLRGASLPTSRNGLTEASDGNPEISTSQSQRISLVDADRLQLVPELNKRPPGLSQEAVDRLQLEVFMNTEHI
         +NS RTGLSGDSRLPG+VLLARERLLERLRGAS P SRN L EA DG+PEIST++SQRISLVDADR+QLVP  +KRPPGLSQ+A+DRLQLEVF+NTEHI
Subjt:  IRNSSRTGLSGDSRLPGAVLLARERLLERLRGASLPTSRNGLTEASDGNPEISTSQSQRISLVDADRLQLVPELNKRPPGLSQEAVDRLQLEVFMNTEHI

Query:  IDDD-PTTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDRWVRSCGDCPYCRQRIDVN
        IDDD  TT TS +CSICLESFTDGD LIHLPCEHKFHHACLDRW+R+CG+CPYCRQ + +N
Subjt:  IDDD-PTTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDRWVRSCGDCPYCRQRIDVN

TrEMBL top hitse value%identityAlignment
A0A0A0K6D2 RING-type domain-containing protein4.1e-11077.31Show/hide
Query:  MTSASELFHHRRYRWGRTDADLGLDSEPPDRHLPSPRRHHGHTGTHRRDLNACGAFRRSSLQERHQSPRFSYPLAQDRSAAQSDSVTSIGSRNSINANIH
        MTSASELF+ RRYR+GRTD+DLGLDSEPPDRHL   RRHHGH G HRRDLN+CG FRRSSLQER QSPRF  PL+ DRS AQSDS TS+ SRN+IN N  
Subjt:  MTSASELFHHRRYRWGRTDADLGLDSEPPDRHLPSPRRHHGHTGTHRRDLNACGAFRRSSLQERHQSPRFSYPLAQDRSAAQSDSVTSIGSRNSINANIH

Query:  IRNSSRTGLSGDSRLPGAVLLARERLLERLRGASLPTSRNGLTEASDGNPEISTSQSQRISLVDADRLQLVPELNKRPPGLSQEAVDRLQLEVFMNTEHI
         +NS R+GLSGDSRLPG+VLLARERLLERLRGAS PT+RN L EAS+GNPE +TS+SQRISLVDADR++LV   +KRPPGLSQ+A++RLQLEVF+NT+HI
Subjt:  IRNSSRTGLSGDSRLPGAVLLARERLLERLRGASLPTSRNGLTEASDGNPEISTSQSQRISLVDADRLQLVPELNKRPPGLSQEAVDRLQLEVFMNTEHI

Query:  IDDDPTTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDRWVRSCGDCPYCRQRIDVN
        I+D   TITSTDCSICLESFTDGDKLIHLPCEHKFHH CLDRW+R+CG+CPYCRQ I +N
Subjt:  IDDDPTTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDRWVRSCGDCPYCRQRIDVN

A0A1S3C156 E3 ubiquitin-protein ligase RLIM1.8e-11078.99Show/hide
Query:  MTSASELFHHRRYRWGRTDADLGLDSEPPDRHLPSPRRHHGHTGTHRRDLNACGAFRRSSLQERHQSPRFSYPLAQDRSAAQSDSVTSIGSRNSINANIH
        MTSASELF+ RRYR+GRTD+DLGLDSEPPDR+L   RRHHGH   HRRDLN+CG FRRSSLQER QSPRF  PL+ DRS AQSDS TS+GSRN+IN N  
Subjt:  MTSASELFHHRRYRWGRTDADLGLDSEPPDRHLPSPRRHHGHTGTHRRDLNACGAFRRSSLQERHQSPRFSYPLAQDRSAAQSDSVTSIGSRNSINANIH

Query:  IRNSSRTGLSGDSRLPGAVLLARERLLERLRGASLPTSRNGLTEASDGNPEISTSQSQRISLVDADRLQLVPELNKRPPGLSQEAVDRLQLEVFMNTEHI
         +NS R+GLSGDSRLPG+VLLARERLLERLRGAS PTSRN L EAS+GNPEISTS+SQRISL+DADR++LV   +KRPPGLSQ+A++RLQLEVF+NT+ I
Subjt:  IRNSSRTGLSGDSRLPGAVLLARERLLERLRGASLPTSRNGLTEASDGNPEISTSQSQRISLVDADRLQLVPELNKRPPGLSQEAVDRLQLEVFMNTEHI

Query:  IDDDPTTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDRWVRSCGDCPYCRQRI
        IDDD  TITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDRW+R+CG+CPYCRQ I
Subjt:  IDDDPTTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDRWVRSCGDCPYCRQRI

A0A5A7SMR0 E3 ubiquitin-protein ligase RLIM1.8e-11078.99Show/hide
Query:  MTSASELFHHRRYRWGRTDADLGLDSEPPDRHLPSPRRHHGHTGTHRRDLNACGAFRRSSLQERHQSPRFSYPLAQDRSAAQSDSVTSIGSRNSINANIH
        MTSASELF+ RRYR+GRTD+DLGLDSEPPDR+L   RRHHGH   HRRDLN+CG FRRSSLQER QSPRF  PL+ DRS AQSDS TS+GSRN+IN N  
Subjt:  MTSASELFHHRRYRWGRTDADLGLDSEPPDRHLPSPRRHHGHTGTHRRDLNACGAFRRSSLQERHQSPRFSYPLAQDRSAAQSDSVTSIGSRNSINANIH

Query:  IRNSSRTGLSGDSRLPGAVLLARERLLERLRGASLPTSRNGLTEASDGNPEISTSQSQRISLVDADRLQLVPELNKRPPGLSQEAVDRLQLEVFMNTEHI
         +NS R+GLSGDSRLPG+VLLARERLLERLRGAS PTSRN L EAS+GNPEISTS+SQRISL+DADR++LV   +KRPPGLSQ+A++RLQLEVF+NT+ I
Subjt:  IRNSSRTGLSGDSRLPGAVLLARERLLERLRGASLPTSRNGLTEASDGNPEISTSQSQRISLVDADRLQLVPELNKRPPGLSQEAVDRLQLEVFMNTEHI

Query:  IDDDPTTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDRWVRSCGDCPYCRQRI
        IDDD  TITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDRW+R+CG+CPYCRQ I
Subjt:  IDDDPTTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDRWVRSCGDCPYCRQRI

A0A6J1D583 probable E3 ubiquitin-protein ligase RHY1A8.8e-14598.85Show/hide
Query:  MTSASELFHHRRYRWGRTDADLGLDSEPPDRHLPSPRRHHGHTGTHRRDLNACGAFRRSSLQERHQSPRFSYPLAQDRSAAQSDSVTSIGSRNSINANIH
        MTSASELFHHRRYRWGRTDADLGLDSEPPDRHLPSPRRHHGHTGTHRRDLNACGAFRRSSLQERHQSPRFSYPLAQDRSAAQSDSVTS+GSRNSINANIH
Subjt:  MTSASELFHHRRYRWGRTDADLGLDSEPPDRHLPSPRRHHGHTGTHRRDLNACGAFRRSSLQERHQSPRFSYPLAQDRSAAQSDSVTSIGSRNSINANIH

Query:  IRNSSRTGLSGDSRLPGAVLLARERLLERLRGASLPTSRNGLTEASDGNPEISTSQSQRISLVDADRLQLVPELNKRPPGLSQEAVDRLQLEVFMNTEHI
        IRNSSRTGLS DSRLPGAVLLARERLLERLRGASLPTSRNGLTEASDGNPEISTSQSQRISLVDADRLQLVPELNKRPPGLS EAVDRLQLEVFMNTEHI
Subjt:  IRNSSRTGLSGDSRLPGAVLLARERLLERLRGASLPTSRNGLTEASDGNPEISTSQSQRISLVDADRLQLVPELNKRPPGLSQEAVDRLQLEVFMNTEHI

Query:  IDDDPTTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDRWVRSCGDCPYCRQRIDVN
        IDDDPTTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDRWVRSCGDCPYCRQRIDVN
Subjt:  IDDDPTTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDRWVRSCGDCPYCRQRIDVN

A0A6J1JIJ3 probable E3 ubiquitin-protein ligase RHY1A2.3e-10577.01Show/hide
Query:  MTSASELFHHRRYRWGRTDADLGLDSEPPDRHLPSPRRHHGHTGTHRRDLNACGAFRRSSLQERHQSPRFSYPLAQDRSAAQSDSVTSIGSRNSINANIH
        MTSASELFH RRYR GRTDADLGLDSEPPDRHL   RRHHGH G HRR LNACGAFRRSSLQERHQSPRF  PLA DRS AQS+S  S+GSRN+INAN  
Subjt:  MTSASELFHHRRYRWGRTDADLGLDSEPPDRHLPSPRRHHGHTGTHRRDLNACGAFRRSSLQERHQSPRFSYPLAQDRSAAQSDSVTSIGSRNSINANIH

Query:  IRNSSRTGLSGDSRLPGAVLLARERLLERLRGASLPTSRNGLTEASDGNPEISTSQSQRISLVDADRLQLVPELNKRPPGLSQEAVDRLQLEVFMNTEHI
        I+NS R GLSGDSRLPG+VLLARERL ERLRGAS PT RNGL EA D +PEIS S+SQ ISL DADRL+LVP ++KRPPGLS EA++ LQLE F++ EHI
Subjt:  IRNSSRTGLSGDSRLPGAVLLARERLLERLRGASLPTSRNGLTEASDGNPEISTSQSQRISLVDADRLQLVPELNKRPPGLSQEAVDRLQLEVFMNTEHI

Query:  IDDDPT-TITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDRWVRSCGDCPYCRQRIDVN
        IDDD T T TS DCSICL+SF DGDKLIHLPC+HKFHHACL+ W+R+CG+CPYCRQ I VN
Subjt:  IDDDPT-TITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDRWVRSCGDCPYCRQRIDVN

SwissProt top hitse value%identityAlignment
Q07G42 E3 ubiquitin-protein ligase RNF122.7e-1031.4Show/hide
Query:  SRNGLT-EASDGNPEISTSQSQRISLVDADRLQLVPELNKRPPGLSQEAVDRLQLEVFMNTEHIIDDDPTTITSTDCSICLESFTDGDKLIHLPCEHKFH
        SR G+T E S   P +S +Q   ++  D D          +P GL++E +D L    F   + +            CS+C+  +T+G+KL  LPC H++H
Subjt:  SRNGLT-EASDGNPEISTSQSQRISLVDADRLQLVPELNKRPPGLSQEAVDRLQLEVFMNTEHIIDDDPTTITSTDCSICLESFTDGDKLIHLPCEHKFH

Query:  HACLDRWVRSCGDCPYCRQRI
          C+DRW+     CP CR+ +
Subjt:  HACLDRWVRSCGDCPYCRQRI

Q7T037 E3 ubiquitin-protein ligase RNF12-B1.4e-0932.23Show/hide
Query:  SRNGLT-EASDGNPEISTSQSQRISLVDADRLQLVPELNKRPPGLSQEAVDRLQLEVFMNTEHIIDDDPTTITSTDCSICLESFTDGDKLIHLPCEHKFH
        SR G+T E S   P +S +Q   ++  D D          +P GL++E +D L      +T +  ++D        CS+C+  +T+G+KL  LPC H++H
Subjt:  SRNGLT-EASDGNPEISTSQSQRISLVDADRLQLVPELNKRPPGLSQEAVDRLQLEVFMNTEHIIDDDPTTITSTDCSICLESFTDGDKLIHLPCEHKFH

Query:  HACLDRWVRSCGDCPYCRQRI
          C+DRW+     CP CR+ +
Subjt:  HACLDRWVRSCGDCPYCRQRI

Q7XLY8 E3 ubiquitin-protein ligase Os04g05909003.0e-0934.57Show/hide
Query:  PPGLSQEAVDRLQLEVFMNTEHIIDDDPTTITSTDCSICLESFTDGDKLIHLP-CEHKFHHACLDRWVRSCGDCPYCRQRI
        P GL +  ++++ +  +   +  +        +TDCS+CL  F+DG+ L  LP C H FH  C+D W++S  +CP CR  I
Subjt:  PPGLSQEAVDRLQLEVFMNTEHIIDDDPTTITSTDCSICLESFTDGDKLIHLP-CEHKFHHACLDRWVRSCGDCPYCRQRI

Q852U6 Probable E3 ubiquitin-protein ligase RHY1A2.8e-3940.7Show/hide
Query:  MTSASELFHHRRYRWGRTDADLGLDSEPPDRHLPSPRRHHG-HTGTHRRDLNACGAFRRSSLQERHQSPRFSYPLAQDRSAAQSDSVTSIGSRNSINANI
        MTSASELF  RR R GR+D  L  D+     H     R HG H    R D + C   RR + + R    RF +   Q+RS    D   +    N+ + + 
Subjt:  MTSASELFHHRRYRWGRTDADLGLDSEPPDRHLPSPRRHHG-HTGTHRRDLNACGAFRRSSLQERHQSPRFSYPLAQDRSAAQSDSVTSIGSRNSINANI

Query:  HIRNSSRTGLSGDSRLPGAVLLARERLLERLRGASLPTSRNGLTEASDGNPEISTSQSQRISLVDADRLQLVPELNKRPPGLSQEAVDRLQLEVFMNTEH
          ++SS   L+G  RLPGAVLLAR+RL ERLRG SL ++      + D   E S        +     LQ+  E NK+P GL+Q+A++ L  + F + E 
Subjt:  HIRNSSRTGLSGDSRLPGAVLLARERLLERLRGASLPTSRNGLTEASDGNPEISTSQSQRISLVDADRLQLVPELNKRPPGLSQEAVDRLQLEVFMNTEH

Query:  IIDDDPTTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDRWVRSCGDCPYCRQRI
                    DCSICLESFT GD LI LPC H FH +CL+ W+R+CGDCP CR+ I
Subjt:  IIDDDPTTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDRWVRSCGDCPYCRQRI

Q9NVW2 E3 ubiquitin-protein ligase RLIM1.0e-0925.41Show/hide
Query:  AQDRSA-AQSDSVTSIGSRNSINANIHIRNSSRTGLSGDSRLPGAVLLARERLLERLRGASLPTSRNGLTEASDGNPEISTSQSQRISLVDADRLQLVPE
        A+ RS    S   +S GS +S +++    +SS +  S  S   G        L E     S  +  +G          ++  +S  +  +   +  L+ E
Subjt:  AQDRSA-AQSDSVTSIGSRNSINANIHIRNSSRTGLSGDSRLPGAVLLARERLLERLRGASLPTSRNGLTEASDGNPEISTSQSQRISLVDADRLQLVPE

Query:  -LNKRPPGLSQEAVDRLQLEVFMNTEHIIDDDPTTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDRWVRSCGDCPYCRQRI
          + +P GL++E +D L +  F   + +            CS+C+  +T+G+KL  LPC H++H  C+DRW+     CP CR+ +
Subjt:  -LNKRPPGLSQEAVDRLQLEVFMNTEHIIDDDPTTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDRWVRSCGDCPYCRQRI

Arabidopsis top hitse value%identityAlignment
AT1G49850.1 RING/U-box superfamily protein2.0e-4040.7Show/hide
Query:  MTSASELFHHRRYRWGRTDADLGLDSEPPDRHLPSPRRHHG-HTGTHRRDLNACGAFRRSSLQERHQSPRFSYPLAQDRSAAQSDSVTSIGSRNSINANI
        MTSASELF  RR R GR+D  L  D+     H     R HG H    R D + C   RR + + R    RF +   Q+RS    D   +    N+ + + 
Subjt:  MTSASELFHHRRYRWGRTDADLGLDSEPPDRHLPSPRRHHG-HTGTHRRDLNACGAFRRSSLQERHQSPRFSYPLAQDRSAAQSDSVTSIGSRNSINANI

Query:  HIRNSSRTGLSGDSRLPGAVLLARERLLERLRGASLPTSRNGLTEASDGNPEISTSQSQRISLVDADRLQLVPELNKRPPGLSQEAVDRLQLEVFMNTEH
          ++SS   L+G  RLPGAVLLAR+RL ERLRG SL ++      + D   E S        +     LQ+  E NK+P GL+Q+A++ L  + F + E 
Subjt:  HIRNSSRTGLSGDSRLPGAVLLARERLLERLRGASLPTSRNGLTEASDGNPEISTSQSQRISLVDADRLQLVPELNKRPPGLSQEAVDRLQLEVFMNTEH

Query:  IIDDDPTTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDRWVRSCGDCPYCRQRI
                    DCSICLESFT GD LI LPC H FH +CL+ W+R+CGDCP CR+ I
Subjt:  IIDDDPTTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDRWVRSCGDCPYCRQRI

AT2G15580.1 RING/U-box superfamily protein2.8e-1054.35Show/hide
Query:  DCSICLESFTDGDKLIHLPCEHKFHHACLDRWVRSCGDCPYCRQRI
        DC+ICL+ F  G+ L+HLPC HKFH  CL  W+ +   CPYCR  I
Subjt:  DCSICLESFTDGDKLIHLPCEHKFHHACLDRWVRSCGDCPYCRQRI

AT3G15070.1 RING/U-box superfamily protein8.1e-1030.46Show/hide
Query:  GDSRLPGAVLLARERLLERLRGASLPTSRNGLTEASD---GNPEISTSQSQRISLVD---ADRLQLVPELNKRPPGLSQEAVDRLQLEVFMNTEHIIDDD
        G+  +P A+L  R R L   R  ++P + N   E  D       +   Q  R+ + D    + L L  ++     GLS E V  L L+   +T   +++ 
Subjt:  GDSRLPGAVLLARERLLERLRGASLPTSRNGLTEASD---GNPEISTSQSQRISLVD---ADRLQLVPELNKRPPGLSQEAVDRLQLEVFMNTEHIIDDD

Query:  PTTITSTD-CSICLESFTDGDKLIHLPCEHKFHHACLDRWVRSCGDCPYCR
        P+T   TD C+IC E++ + DK+  L C HK+H  CL +W+     CP C+
Subjt:  PTTITSTD-CSICLESFTDGDKLIHLPCEHKFHHACLDRWVRSCGDCPYCR

AT3G48030.1 hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein8.1e-1036.59Show/hide
Query:  GLSQEAVDRLQLEVFMNTEHIIDDDPTTITSTDCSICLESFTDGDKLIHLP-CEHKFHHACLDRWVRSCGDCPYCRQRIDVN
        GL Q A+D L + ++ N    ++         DC++CL  F+D DKL  LP C H FH  C+D W+ S   CP CR+ +  +
Subjt:  GLSQEAVDRLQLEVFMNTEHIIDDDPTTITSTDCSICLESFTDGDKLIHLP-CEHKFHHACLDRWVRSCGDCPYCRQRIDVN

AT4G17905.1 RING/U-box superfamily protein4.8e-1050.94Show/hide
Query:  ITSTDCSICLESFTDGDKLIHLP-CEHKFHHACLDRWVRSCGDCPYCRQRIDV
        I  TDCSICL  F + + L  LP C H FH  C+DRW++S  +CP CR +I V
Subjt:  ITSTDCSICLESFTDGDKLIHLP-CEHKFHHACLDRWVRSCGDCPYCRQRIDV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAGCGCTTCGGAGCTGTTTCATCATCGGAGGTACAGGTGGGGCCGGACCGACGCGGATTTAGGGCTTGATTCTGAGCCTCCCGATCGGCATCTTCCGTCTCCACG
GCGTCATCATGGTCACACCGGCACTCATCGCCGCGATTTGAACGCCTGTGGCGCTTTCCGACGATCCTCGCTGCAAGAACGCCATCAATCTCCCCGGTTTTCGTACCCTC
TTGCTCAGGATCGGTCGGCTGCTCAGTCTGACTCGGTTACAAGTATTGGTTCTAGAAATAGTATTAATGCGAATATTCATATTCGGAACAGCTCGAGGACTGGGTTGAGT
GGGGATTCCAGATTGCCAGGAGCCGTTTTACTTGCTAGGGAAAGGCTTCTGGAGAGATTGAGAGGTGCCTCTTTGCCGACGAGCAGGAATGGTCTTACTGAAGCATCAGA
TGGGAATCCAGAAATCTCGACAAGTCAATCGCAAAGGATCTCCCTCGTCGATGCTGACAGGCTGCAATTAGTTCCTGAACTCAACAAGAGGCCCCCTGGTCTCTCACAGG
AGGCAGTGGACCGCTTACAACTTGAGGTTTTTATGAATACAGAGCATATCATTGACGATGACCCGACAACGATAACGTCAACAGATTGTAGTATATGTCTAGAGAGTTTC
ACAGACGGAGACAAACTCATCCATCTGCCCTGTGAGCACAAATTTCACCATGCTTGCTTGGACCGATGGGTTCGAAGTTGTGGAGATTGTCCATATTGTCGACAACGTAT
CGATGTAAAC
mRNA sequenceShow/hide mRNA sequence
ATGACGAGCGCTTCGGAGCTGTTTCATCATCGGAGGTACAGGTGGGGCCGGACCGACGCGGATTTAGGGCTTGATTCTGAGCCTCCCGATCGGCATCTTCCGTCTCCACG
GCGTCATCATGGTCACACCGGCACTCATCGCCGCGATTTGAACGCCTGTGGCGCTTTCCGACGATCCTCGCTGCAAGAACGCCATCAATCTCCCCGGTTTTCGTACCCTC
TTGCTCAGGATCGGTCGGCTGCTCAGTCTGACTCGGTTACAAGTATTGGTTCTAGAAATAGTATTAATGCGAATATTCATATTCGGAACAGCTCGAGGACTGGGTTGAGT
GGGGATTCCAGATTGCCAGGAGCCGTTTTACTTGCTAGGGAAAGGCTTCTGGAGAGATTGAGAGGTGCCTCTTTGCCGACGAGCAGGAATGGTCTTACTGAAGCATCAGA
TGGGAATCCAGAAATCTCGACAAGTCAATCGCAAAGGATCTCCCTCGTCGATGCTGACAGGCTGCAATTAGTTCCTGAACTCAACAAGAGGCCCCCTGGTCTCTCACAGG
AGGCAGTGGACCGCTTACAACTTGAGGTTTTTATGAATACAGAGCATATCATTGACGATGACCCGACAACGATAACGTCAACAGATTGTAGTATATGTCTAGAGAGTTTC
ACAGACGGAGACAAACTCATCCATCTGCCCTGTGAGCACAAATTTCACCATGCTTGCTTGGACCGATGGGTTCGAAGTTGTGGAGATTGTCCATATTGTCGACAACGTAT
CGATGTAAAC
Protein sequenceShow/hide protein sequence
MTSASELFHHRRYRWGRTDADLGLDSEPPDRHLPSPRRHHGHTGTHRRDLNACGAFRRSSLQERHQSPRFSYPLAQDRSAAQSDSVTSIGSRNSINANIHIRNSSRTGLS
GDSRLPGAVLLARERLLERLRGASLPTSRNGLTEASDGNPEISTSQSQRISLVDADRLQLVPELNKRPPGLSQEAVDRLQLEVFMNTEHIIDDDPTTITSTDCSICLESF
TDGDKLIHLPCEHKFHHACLDRWVRSCGDCPYCRQRIDVN