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MS012195 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012195
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold797:356811..356999
RNA-Seq ExpressionMS012195
SyntenyMS012195
Gene Ontology termsGO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4262087.1 unnamed protein product [Prunus armeniaca]2.0e-0950.79Show/hide
Query:  IWNLNISLKIRTFLWRSVHNFIPATLNLSRRGLDVSPFCPCCRSQVESTTHTLFACPRAQQIW
        IWN     KI+ FLWRSV+ F+P      +R L  SP CP C+ Q ES  HTLF CPRA ++W
Subjt:  IWNLNISLKIRTFLWRSVHNFIPATLNLSRRGLDVSPFCPCCRSQVESTTHTLFACPRAQQIW

KAF4378452.1 hypothetical protein F8388_021646 [Cannabis sativa]3.5e-0941.94Show/hide
Query:  WNLNISLKIRTFLWRSVHNFIPATLNLSRRGLDVSPFCPCCRSQVESTTHTLFACPRAQQIW
        W L +  K+R F+W+  HN +P    L+RR +  SP+CP C+ Q E+  H LF C RA+++W
Subjt:  WNLNISLKIRTFLWRSVHNFIPATLNLSRRGLDVSPFCPCCRSQVESTTHTLFACPRAQQIW

XP_030498122.1 uncharacterized protein LOC115713779 [Cannabis sativa]4.6e-0941.94Show/hide
Query:  WNLNISLKIRTFLWRSVHNFIPATLNLSRRGLDVSPFCPCCRSQVESTTHTLFACPRAQQIW
        W L +  K+R F+W+  HN +P    L+RR +  SP+CP C+ Q E+  H LF C RA+++W
Subjt:  WNLNISLKIRTFLWRSVHNFIPATLNLSRRGLDVSPFCPCCRSQVESTTHTLFACPRAQQIW

XP_031101874.1 uncharacterized protein LOC116005777 [Ipomoea triloba]2.0e-0946.03Show/hide
Query:  IWNLNISLKIRTFLWRSVHNFIPATLNLSRRGLDVSPFCPCCRSQVESTTHTLFACPRAQQIW
        +WNL I  +  TF+WR++ N +P T NL +R LD++P CP C  QVE  TH L  C  A  +W
Subjt:  IWNLNISLKIRTFLWRSVHNFIPATLNLSRRGLDVSPFCPCCRSQVESTTHTLFACPRAQQIW

XP_031125428.1 uncharacterized protein LOC116027784 [Ipomoea triloba]1.2e-0946.03Show/hide
Query:  IWNLNISLKIRTFLWRSVHNFIPATLNLSRRGLDVSPFCPCCRSQVESTTHTLFACPRAQQIW
        +WNL I  + +TFLWR++ N +P T NL +R LD++PFCP C  Q ES +H    C  A  +W
Subjt:  IWNLNISLKIRTFLWRSVHNFIPATLNLSRRGLDVSPFCPCCRSQVESTTHTLFACPRAQQIW

TrEMBL top hitse value%identityAlignment
A0A453J3J2 zf-RVT domain-containing protein1.5e-1042.86Show/hide
Query:  IWNLNISLKIRTFLWRSVHNFIPATLNLSRRGLDVSPFCPCCRSQVESTTHTLFACPRAQQIW
        IW L+   K++ F+WR++H  +P  + L+ R + VSP CPCC S +E T H LF C +A+++W
Subjt:  IWNLNISLKIRTFLWRSVHNFIPATLNLSRRGLDVSPFCPCCRSQVESTTHTLFACPRAQQIW

A0A453LYD2 zf-RVT domain-containing protein1.5e-1042.86Show/hide
Query:  IWNLNISLKIRTFLWRSVHNFIPATLNLSRRGLDVSPFCPCCRSQVESTTHTLFACPRAQQIW
        IW L+   K++ F+WR++H  +P  + L+ R + VSP CPCC S +E T H LF C +A+++W
Subjt:  IWNLNISLKIRTFLWRSVHNFIPATLNLSRRGLDVSPFCPCCRSQVESTTHTLFACPRAQQIW

A0A6J5TFU7 Uncharacterized protein9.9e-1050.79Show/hide
Query:  IWNLNISLKIRTFLWRSVHNFIPATLNLSRRGLDVSPFCPCCRSQVESTTHTLFACPRAQQIW
        IWN     KI+ FLWRSV+ F+P      +R L  SP CP C+ Q ES  HTLF CPRA ++W
Subjt:  IWNLNISLKIRTFLWRSVHNFIPATLNLSRRGLDVSPFCPCCRSQVESTTHTLFACPRAQQIW

A0A7N2LAI0 zf-RVT domain-containing protein4.5e-1047.62Show/hide
Query:  IWNLNISLKIRTFLWRSVHNFIPATLNLSRRGLDVSPFCPCCRSQVESTTHTLFACPRAQQIW
        IW+LN+  KIRTF+WR+  N +P   NL RR + V P C  C+ + E+TTH L+ CP A+ +W
Subjt:  IWNLNISLKIRTFLWRSVHNFIPATLNLSRRGLDVSPFCPCCRSQVESTTHTLFACPRAQQIW

A0A803QEQ9 Uncharacterized protein7.6e-1043.55Show/hide
Query:  WNLNISLKIRTFLWRSVHNFIPATLNLSRRGLDVSPFCPCCRSQVESTTHTLFACPRAQQIW
        W L++  K+R F+W+  HN +P    L+R+ +  SPFCP C+ Q ES  H LF C RA+++W
Subjt:  WNLNISLKIRTFLWRSVHNFIPATLNLSRRGLDVSPFCPCCRSQVESTTHTLFACPRAQQIW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein6.8e-1142.86Show/hide
Query:  IWNLNISLKIRTFLWRSVHNFIPATLNLSRRGLDVSPFCPCCRSQVESTTHTLFACPRAQQIW
        IWNL I  K++ FLWR++   +  T  L+ RG+ + P CP C  + ES  H LF CP A   W
Subjt:  IWNLNISLKIRTFLWRSVHNFIPATLNLSRRGLDVSPFCPCCRSQVESTTHTLFACPRAQQIW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTTGGAATCTTAACATCTCATTAAAAATTCGAACATTTCTATGGAGATCAGTGCATAATTTCATTCCAGCAACGTTAAATTTGAGTAGGAGGGGCTTAGATGTCTCACC
TTTTTGTCCATGTTGTCGATCTCAGGTGGAATCCACTACTCATACCCTCTTTGCTTGTCCTCGAGCTCAGCAAATCTGG
mRNA sequenceShow/hide mRNA sequence
ATTTGGAATCTTAACATCTCATTAAAAATTCGAACATTTCTATGGAGATCAGTGCATAATTTCATTCCAGCAACGTTAAATTTGAGTAGGAGGGGCTTAGATGTCTCACC
TTTTTGTCCATGTTGTCGATCTCAGGTGGAATCCACTACTCATACCCTCTTTGCTTGTCCTCGAGCTCAGCAAATCTGG
Protein sequenceShow/hide protein sequence
IWNLNISLKIRTFLWRSVHNFIPATLNLSRRGLDVSPFCPCCRSQVESTTHTLFACPRAQQIW