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MS012227 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012227
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionstress enhanced protein 1, chloroplastic
Genome locationscaffold797:613321..614704
RNA-Seq ExpressionMS012227
SyntenyMS012227
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011641.1 Stress enhanced protein 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]1.1e-5287.69Show/hide
Query:  DASFA-RSAPKVFPLHRRPLPNLYRIGTAFATGSPLVLSKPTGQKKHAWKPNSVSIRCEQSTQGSNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGL
        DASFA R AP+VFPLHR  LPNLYR+GT FATGSPLVLSKPTGQKKH  KPNSVSIRCEQS+Q SN LDVWLGRLAMVGFAIAISVEIATGKGLLENFG+
Subjt:  DASFA-RSAPKVFPLHRRPLPNLYRIGTAFATGSPLVLSKPTGQKKHAWKPNSVSIRCEQSTQGSNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGL

Query:  TTPLPTVALAVTALVGILTAVFIFQSASKS
        TTPLP+VALAVTALVGILTAVFIFQSA+K+
Subjt:  TTPLPTVALAVTALVGILTAVFIFQSASKS

XP_022148743.1 ADP-ribosylation factor 2 [Momordica charantia]3.9e-63100Show/hide
Query:  DASFARSAPKVFPLHRRPLPNLYRIGTAFATGSPLVLSKPTGQKKHAWKPNSVSIRCEQSTQGSNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGLT
        DASFARSAPKVFPLHRRPLPNLYRIGTAFATGSPLVLSKPTGQKKHAWKPNSVSIRCEQSTQGSNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGLT
Subjt:  DASFARSAPKVFPLHRRPLPNLYRIGTAFATGSPLVLSKPTGQKKHAWKPNSVSIRCEQSTQGSNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGLT

Query:  TPLPTVALAVTALVGILTAVFIFQSASK
        TPLPTVALAVTALVGILTAVFIFQSASK
Subjt:  TPLPTVALAVTALVGILTAVFIFQSASK

XP_022988996.1 stress enhanced protein 1, chloroplastic [Cucurbita maxima]6.8e-5286.05Show/hide
Query:  DASFARSAPKVFPLHRRPLPNLYRIGTAFATGSPLVLSKPTGQKKHAWKPNSVSIRCEQSTQGSNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGLT
        DASFARSAPK FPL R  LPNLYR GT FATGSPLV+SKPTGQ K A KPNSVSIRCEQS+Q SNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFG+T
Subjt:  DASFARSAPKVFPLHRRPLPNLYRIGTAFATGSPLVLSKPTGQKKHAWKPNSVSIRCEQSTQGSNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGLT

Query:  TPLPTVALAVTALVGILTAVFIFQSASKS
         PLP+ AL VTALVGILTAVFIFQSASK+
Subjt:  TPLPTVALAVTALVGILTAVFIFQSASKS

XP_023553862.1 stress enhanced protein 1, chloroplastic-like [Cucurbita pepo subsp. pepo]1.4e-5287.69Show/hide
Query:  DASFA-RSAPKVFPLHRRPLPNLYRIGTAFATGSPLVLSKPTGQKKHAWKPNSVSIRCEQSTQGSNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGL
        DASFA R AP+VFPLHR  LPNLYR+GT FATGSPLVLSKPTGQKKH  KPNSVSIRCEQS+Q SN LDVWLGRLAMVGFAIAISVEIATGKGLLENFG+
Subjt:  DASFA-RSAPKVFPLHRRPLPNLYRIGTAFATGSPLVLSKPTGQKKHAWKPNSVSIRCEQSTQGSNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGL

Query:  TTPLPTVALAVTALVGILTAVFIFQSASKS
        TTPLP+VALAVTALVGILTAVFIFQSA+K+
Subjt:  TTPLPTVALAVTALVGILTAVFIFQSASKS

XP_031745020.1 stress enhanced protein 1, chloroplastic [Cucumis sativus]1.1e-5286.82Show/hide
Query:  DASFARSAPKVFPLHRRPLPNLYRIGTAFATGSPLVLSKPTGQKKHAWKPNSVSIRCEQSTQGSNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGLT
        D SFAR+APK FPLHR PLPNL+RIGT FATGSPLVLSKPTGQKKHA K NSVSIRCEQSTQ S NLDVWLGR AMVGFAIAISVEIATGKGLLENFG+T
Subjt:  DASFARSAPKVFPLHRRPLPNLYRIGTAFATGSPLVLSKPTGQKKHAWKPNSVSIRCEQSTQGSNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGLT

Query:  TPLPTVALAVTALVGILTAVFIFQSASKS
        +PLP+VALAVTALVG+LTAVFIFQSA+K+
Subjt:  TPLPTVALAVTALVGILTAVFIFQSASKS

TrEMBL top hitse value%identityAlignment
A0A0A0K2J5 Uncharacterized protein5.1e-5386.82Show/hide
Query:  DASFARSAPKVFPLHRRPLPNLYRIGTAFATGSPLVLSKPTGQKKHAWKPNSVSIRCEQSTQGSNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGLT
        D SFAR+APK FPLHR PLPNL+RIGT FATGSPLVLSKPTGQKKHA K NSVSIRCEQSTQ S NLDVWLGR AMVGFAIAISVEIATGKGLLENFG+T
Subjt:  DASFARSAPKVFPLHRRPLPNLYRIGTAFATGSPLVLSKPTGQKKHAWKPNSVSIRCEQSTQGSNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGLT

Query:  TPLPTVALAVTALVGILTAVFIFQSASKS
        +PLP+VALAVTALVG+LTAVFIFQSA+K+
Subjt:  TPLPTVALAVTALVGILTAVFIFQSASKS

A0A6J1D4Y5 ADP-ribosylation factor 21.9e-63100Show/hide
Query:  DASFARSAPKVFPLHRRPLPNLYRIGTAFATGSPLVLSKPTGQKKHAWKPNSVSIRCEQSTQGSNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGLT
        DASFARSAPKVFPLHRRPLPNLYRIGTAFATGSPLVLSKPTGQKKHAWKPNSVSIRCEQSTQGSNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGLT
Subjt:  DASFARSAPKVFPLHRRPLPNLYRIGTAFATGSPLVLSKPTGQKKHAWKPNSVSIRCEQSTQGSNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGLT

Query:  TPLPTVALAVTALVGILTAVFIFQSASK
        TPLPTVALAVTALVGILTAVFIFQSASK
Subjt:  TPLPTVALAVTALVGILTAVFIFQSASK

A0A6J1EI92 stress enhanced protein 1, chloroplastic9.6e-5285.27Show/hide
Query:  DASFARSAPKVFPLHRRPLPNLYRIGTAFATGSPLVLSKPTGQKKHAWKPNSVSIRCEQSTQGSNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGLT
        DASFARSAPK FPL R  LPNLYR GT FATGSPLV+SKP+GQ K A KPNSVSIRCEQS+Q SNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFG+T
Subjt:  DASFARSAPKVFPLHRRPLPNLYRIGTAFATGSPLVLSKPTGQKKHAWKPNSVSIRCEQSTQGSNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGLT

Query:  TPLPTVALAVTALVGILTAVFIFQSASKS
         PLP+ AL VTALVGILTAVFIFQSASK+
Subjt:  TPLPTVALAVTALVGILTAVFIFQSASKS

A0A6J1IBF1 stress enhanced protein 1, chloroplastic-like isoform X24.3e-5286.15Show/hide
Query:  DASFA-RSAPKVFPLHRRPLPNLYRIGTAFATGSPLVLSKPTGQKKHAWKPNSVSIRCEQSTQGSNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGL
        DASFA R AP+VFPLHR  LPNLYR+GT FATGSPLVLSKPTGQKKH  KPNSVSIRC+QS+Q SN LDVWLGR AMVGFAIAISVEIATGKGLLENFG+
Subjt:  DASFA-RSAPKVFPLHRRPLPNLYRIGTAFATGSPLVLSKPTGQKKHAWKPNSVSIRCEQSTQGSNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGL

Query:  TTPLPTVALAVTALVGILTAVFIFQSASKS
        TTPLP+VALAVTALVGILTAVFIFQSA+K+
Subjt:  TTPLPTVALAVTALVGILTAVFIFQSASKS

A0A6J1JIS2 stress enhanced protein 1, chloroplastic3.3e-5286.05Show/hide
Query:  DASFARSAPKVFPLHRRPLPNLYRIGTAFATGSPLVLSKPTGQKKHAWKPNSVSIRCEQSTQGSNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGLT
        DASFARSAPK FPL R  LPNLYR GT FATGSPLV+SKPTGQ K A KPNSVSIRCEQS+Q SNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFG+T
Subjt:  DASFARSAPKVFPLHRRPLPNLYRIGTAFATGSPLVLSKPTGQKKHAWKPNSVSIRCEQSTQGSNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGLT

Query:  TPLPTVALAVTALVGILTAVFIFQSASKS
         PLP+ AL VTALVGILTAVFIFQSASK+
Subjt:  TPLPTVALAVTALVGILTAVFIFQSASKS

SwissProt top hitse value%identityAlignment
Q9M7I9 Stress enhanced protein 1, chloroplastic4.0e-3164.86Show/hide
Query:  LPNLYRIGTAFATGSPLVLSKPTGQKKHAWKPNSVSIRCEQSTQGSNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGLTTPLPTVALAVTALVGILT
        +P L  I + FA+GSPL+  K +  ++   +  SVSIR EQST+GS+ LD+WLGR AMVGFA+AI+VEI+TGKGLLENFG+ +PLPTVALAVTALVG+L 
Subjt:  LPNLYRIGTAFATGSPLVLSKPTGQKKHAWKPNSVSIRCEQSTQGSNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGLTTPLPTVALAVTALVGILT

Query:  AVFIFQSASKS
        AVFIFQS+SK+
Subjt:  AVFIFQSASKS

Arabidopsis top hitse value%identityAlignment
AT4G34190.1 stress enhanced protein 12.9e-3264.86Show/hide
Query:  LPNLYRIGTAFATGSPLVLSKPTGQKKHAWKPNSVSIRCEQSTQGSNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGLTTPLPTVALAVTALVGILT
        +P L  I + FA+GSPL+  K +  ++   +  SVSIR EQST+GS+ LD+WLGR AMVGFA+AI+VEI+TGKGLLENFG+ +PLPTVALAVTALVG+L 
Subjt:  LPNLYRIGTAFATGSPLVLSKPTGQKKHAWKPNSVSIRCEQSTQGSNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGLTTPLPTVALAVTALVGILT

Query:  AVFIFQSASKS
        AVFIFQS+SK+
Subjt:  AVFIFQSASKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATGCTTCCTTCGCAAGATCAGCACCGAAAGTCTTTCCTCTTCACAGACGTCCCCTTCCGAATTTGTACCGCATCGGAACAGCGTTTGCTACTGGCTCTCCACTTGTGCT
AAGCAAGCCAACTGGTCAGAAGAAGCATGCATGGAAACCAAATTCTGTTTCTATAAGATGTGAGCAAAGTACCCAAGGGAGTAACAATTTGGATGTTTGGCTTGGGCGGC
TCGCGATGGTAGGCTTTGCAATTGCAATCAGTGTTGAAATAGCAACAGGCAAGGGACTTTTGGAGAATTTTGGACTAACGACTCCCCTGCCTACCGTGGCCTTGGCAGTT
ACGGCATTGGTTGGCATATTGACCGCAGTTTTCATCTTCCAATCAGCTTCCAAAAGC
mRNA sequenceShow/hide mRNA sequence
GATGCTTCCTTCGCAAGATCAGCACCGAAAGTCTTTCCTCTTCACAGACGTCCCCTTCCGAATTTGTACCGCATCGGAACAGCGTTTGCTACTGGCTCTCCACTTGTGCT
AAGCAAGCCAACTGGTCAGAAGAAGCATGCATGGAAACCAAATTCTGTTTCTATAAGATGTGAGCAAAGTACCCAAGGGAGTAACAATTTGGATGTTTGGCTTGGGCGGC
TCGCGATGGTAGGCTTTGCAATTGCAATCAGTGTTGAAATAGCAACAGGCAAGGGACTTTTGGAGAATTTTGGACTAACGACTCCCCTGCCTACCGTGGCCTTGGCAGTT
ACGGCATTGGTTGGCATATTGACCGCAGTTTTCATCTTCCAATCAGCTTCCAAAAGC
Protein sequenceShow/hide protein sequence
DASFARSAPKVFPLHRRPLPNLYRIGTAFATGSPLVLSKPTGQKKHAWKPNSVSIRCEQSTQGSNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGLTTPLPTVALAV
TALVGILTAVFIFQSASKS