; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS012234 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012234
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLeucine-rich repeat extensin-like protein 3
Genome locationscaffold797:686848..687587
RNA-Seq ExpressionMS012234
SyntenyMS012234
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR000008 - C2 domain
IPR035892 - C2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008454977.1 PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis melo]1.5e-5894.02Show/hide
Query:  MSTYAIQGQPLEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLS
        MSTY+IQGQPLEVTVIGCTKLKDTEWISRQDPYV LEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREI V VWNSNTVTYDDFIGNGKIQLAKVL+
Subjt:  MSTYAIQGQPLEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLS

Query:  EGYDDSAWSLQTKTGRY
        EGYDDS+WSLQTKTGR+
Subjt:  EGYDDSAWSLQTKTGRY

XP_011658892.1 leucine-rich repeat extensin-like protein 3 [Cucumis sativus]1.4e-5994.87Show/hide
Query:  MSTYAIQGQPLEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLS
        MST+AIQGQPLEVTVIGCTKLKDTEWISRQDPYV LEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINV VWNSNTVTYDDFIGNGKIQLAKVL+
Subjt:  MSTYAIQGQPLEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLS

Query:  EGYDDSAWSLQTKTGRY
        EGYDDS+WSLQTKTGR+
Subjt:  EGYDDSAWSLQTKTGRY

XP_022147782.1 protein SRC2 homolog [Momordica charantia]1.1e-6199.15Show/hide
Query:  MSTYAIQGQPLEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLS
        MSTYAIQGQPLEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLS
Subjt:  MSTYAIQGQPLEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLS

Query:  EGYDDSAWSLQTKTGRY
        EGYDDSAWSLQTKTGR+
Subjt:  EGYDDSAWSLQTKTGRY

XP_022952957.1 C2 domain-containing protein At1g63220-like [Cucurbita moschata]2.6e-5892.31Show/hide
Query:  MSTYAIQGQPLEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLS
        MSTY+IQGQPLE TV+GCTKLKDTEWISRQDPYV LEYGSTKFRTTTCTDGGRNPTFQ+KFVFSLIEGLREINV VWNSNTVTYDDFIG GKIQLAKVLS
Subjt:  MSTYAIQGQPLEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLS

Query:  EGYDDSAWSLQTKTGRY
        EGYDDS+WSLQTKTGR+
Subjt:  EGYDDSAWSLQTKTGRY

XP_038888782.1 protein SRC2 homolog [Benincasa hispida]1.8e-5994.87Show/hide
Query:  MSTYAIQGQPLEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLS
        MSTY IQGQPLEVTVIGCTKLKDTEWISRQDPYV LEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINV VWNSNTVTYDDFIGNGKIQLAKVL+
Subjt:  MSTYAIQGQPLEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLS

Query:  EGYDDSAWSLQTKTGRY
        EGYDDS+WSLQTKTGR+
Subjt:  EGYDDSAWSLQTKTGRY

TrEMBL top hitse value%identityAlignment
A0A0A0K6H5 C2 domain-containing protein6.7e-6094.87Show/hide
Query:  MSTYAIQGQPLEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLS
        MST+AIQGQPLEVTVIGCTKLKDTEWISRQDPYV LEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINV VWNSNTVTYDDFIGNGKIQLAKVL+
Subjt:  MSTYAIQGQPLEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLS

Query:  EGYDDSAWSLQTKTGRY
        EGYDDS+WSLQTKTGR+
Subjt:  EGYDDSAWSLQTKTGRY

A0A1S4E0J9 leucine-rich repeat extensin-like protein 37.4e-5994.02Show/hide
Query:  MSTYAIQGQPLEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLS
        MSTY+IQGQPLEVTVIGCTKLKDTEWISRQDPYV LEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREI V VWNSNTVTYDDFIGNGKIQLAKVL+
Subjt:  MSTYAIQGQPLEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLS

Query:  EGYDDSAWSLQTKTGRY
        EGYDDS+WSLQTKTGR+
Subjt:  EGYDDSAWSLQTKTGRY

A0A5D3C5U4 Leucine-rich repeat extensin-like protein 37.4e-5994.02Show/hide
Query:  MSTYAIQGQPLEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLS
        MSTY+IQGQPLEVTVIGCTKLKDTEWISRQDPYV LEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREI V VWNSNTVTYDDFIGNGKIQLAKVL+
Subjt:  MSTYAIQGQPLEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLS

Query:  EGYDDSAWSLQTKTGRY
        EGYDDS+WSLQTKTGR+
Subjt:  EGYDDSAWSLQTKTGRY

A0A6J1D3B5 protein SRC2 homolog5.5e-6299.15Show/hide
Query:  MSTYAIQGQPLEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLS
        MSTYAIQGQPLEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLS
Subjt:  MSTYAIQGQPLEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLS

Query:  EGYDDSAWSLQTKTGRY
        EGYDDSAWSLQTKTGR+
Subjt:  EGYDDSAWSLQTKTGRY

A0A6J1GLU4 C2 domain-containing protein At1g63220-like1.3e-5892.31Show/hide
Query:  MSTYAIQGQPLEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLS
        MSTY+IQGQPLE TV+GCTKLKDTEWISRQDPYV LEYGSTKFRTTTCTDGGRNPTFQ+KFVFSLIEGLREINV VWNSNTVTYDDFIG GKIQLAKVLS
Subjt:  MSTYAIQGQPLEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLS

Query:  EGYDDSAWSLQTKTGRY
        EGYDDS+WSLQTKTGR+
Subjt:  EGYDDSAWSLQTKTGRY

SwissProt top hitse value%identityAlignment
A2WWV5 Elicitor-responsive protein 17.5e-0825.66Show/hide
Query:  LEVTVIGCTKLKDTEW---ISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSL----IEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLSEGY
        LEV ++    L   ++   I + DPYV+++Y S + +++   D G+NP++ E F F +      G  ++ + + + +T + DDF+G   I +  ++S G 
Subjt:  LEVTVIGCTKLKDTEW---ISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSL----IEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLSEGY

Query:  DDSAWSLQTKTGR
        +   W +     R
Subjt:  DDSAWSLQTKTGR

Q0JBH9 Elicitor-responsive protein 31.2e-1030.93Show/hide
Query:  IQGQPLEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLSEG
        +QG  LEV ++G   L++T+++   DPY +L+  S + +++  +  G +P + E F+FS+     E+ + + +S++ T DDF+G   I L  + +EG
Subjt:  IQGQPLEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLSEG

Q0JHU5 Elicitor-responsive protein 17.5e-0825.66Show/hide
Query:  LEVTVIGCTKLKDTEW---ISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSL----IEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLSEGY
        LEV ++    L   ++   I + DPYV+++Y S + +++   D G+NP++ E F F +      G  ++ + + + +T + DDF+G   I +  ++S G 
Subjt:  LEVTVIGCTKLKDTEW---ISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSL----IEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLSEGY

Query:  DDSAWSLQTKTGR
        +   W +     R
Subjt:  DDSAWSLQTKTGR

Q25AG5 Elicitor-responsive protein 31.2e-1030.93Show/hide
Query:  IQGQPLEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLSEG
        +QG  LEV ++G   L++T+++   DPY +L+  S + +++  +  G +P + E F+FS+     E+ + + +S++ T DDF+G   I L  + +EG
Subjt:  IQGQPLEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLSEG

Q9C8S6 16 kDa phloem protein 21.5e-0829.35Show/hide
Query:  LEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLSEG
        LEV ++    L+D ++++  DPYV L   +   ++      G  P + E F+F++ EG  E+   +++ +  T DD +G   I L  V  EG
Subjt:  LEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLSEG

Arabidopsis top hitse value%identityAlignment
AT1G63220.1 Calcium-dependent lipid-binding (CaLB domain) family protein1.1e-0929.35Show/hide
Query:  LEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLSEG
        LEV ++    L+D ++++  DPYV L   +   ++      G  P + E F+F++ EG  E+   +++ +  T DD +G   I L  V  EG
Subjt:  LEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLSEG

AT3G07940.1 Calcium-dependent ARF-type GTPase activating protein family4.2e-0627.27Show/hide
Query:  LEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLS--EGYDDSA
        ++V V+  T L   + +   DPYV+L  G    +T    +   NP + E  + S+ E +  + V V++ +T + DDF+G  +I +  ++S  + Y+ S+
Subjt:  LEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLS--EGYDDSA

AT3G55470.1 Calcium-dependent lipid-binding (CaLB domain) family protein9.0e-0931.13Show/hide
Query:  LEVTVIGCTKLKDTEWISRQDPYVLLEY-GSTKFRTTTCTDGGRNPTFQEKF----VFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLSEGYDD
        LEV++I    LK ++++ + DPYV ++Y G T+  +    DGGRNPT+ +K      F       ++ V V + +T + DDFIG   + + ++L  G + 
Subjt:  LEVTVIGCTKLKDTEWISRQDPYVLLEY-GSTKFRTTTCTDGGRNPTFQEKF----VFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLSEGYDD

Query:  SAWSLQ
            L+
Subjt:  SAWSLQ

AT3G55470.2 Calcium-dependent lipid-binding (CaLB domain) family protein5.3e-0929.52Show/hide
Query:  LEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKF----VFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLSEGYDDS
        LEV++I    LK ++++ + DPYV ++Y     +++   DGGRNPT+ +K      F       ++ V V + +T + DDFIG   + + ++L  G +  
Subjt:  LEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKF----VFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLSEGYDDS

Query:  AWSLQ
           L+
Subjt:  AWSLQ

AT4G34150.1 Calcium-dependent lipid-binding (CaLB domain) family protein2.4e-4672.32Show/hide
Query:  IQGQPLEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLSEGYDD
        IQGQ LEVTV+GC KLKDTEW SRQDPYV+LEYG    RT TCTDGG+N  FQEKF+F+LIEGLR++ VAVWNSNT++ DDFIGN  IQL KVLS+ YDD
Subjt:  IQGQPLEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLSEGYDD

Query:  SAWSLQTKTGRY
          W+LQ+KTGR+
Subjt:  SAWSLQTKTGRY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGACATATGCCATTCAGGGTCAGCCTCTTGAAGTCACCGTTATTGGATGCACAAAGTTGAAAGATACGGAATGGATTTCAAGGCAGGATCCCTACGTGTTACTTGA
ATATGGTAGCACAAAGTTCCGCACGACCACCTGCACAGATGGTGGCAGAAATCCCACATTCCAAGAGAAATTTGTGTTCTCTCTGATTGAAGGGCTAAGAGAGATTAATG
TTGCAGTTTGGAACAGCAATACAGTTACTTATGATGATTTCATTGGCAATGGAAAAATCCAATTGGCAAAAGTTCTATCAGAAGGATATGATGACAGTGCATGGTCACTT
CAAACTAAAACTGGCAGGTAT
mRNA sequenceShow/hide mRNA sequence
ATGTCGACATATGCCATTCAGGGTCAGCCTCTTGAAGTCACCGTTATTGGATGCACAAAGTTGAAAGATACGGAATGGATTTCAAGGCAGGATCCCTACGTGTTACTTGA
ATATGGTAGCACAAAGTTCCGCACGACCACCTGCACAGATGGTGGCAGAAATCCCACATTCCAAGAGAAATTTGTGTTCTCTCTGATTGAAGGGCTAAGAGAGATTAATG
TTGCAGTTTGGAACAGCAATACAGTTACTTATGATGATTTCATTGGCAATGGAAAAATCCAATTGGCAAAAGTTCTATCAGAAGGATATGATGACAGTGCATGGTCACTT
CAAACTAAAACTGGCAGGTAT
Protein sequenceShow/hide protein sequence
MSTYAIQGQPLEVTVIGCTKLKDTEWISRQDPYVLLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVAVWNSNTVTYDDFIGNGKIQLAKVLSEGYDDSAWSL
QTKTGRY