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MS012237 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012237
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein Ycf2
Genome locationscaffold797:707793..707928
RNA-Seq ExpressionMS012237
SyntenyMS012237
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
GO:0016020 - membrane (cellular component)
GO:0000166 - nucleotide binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QJX65551.1 hypothetical protein RF2 [Cipadessa cinerascens]1.2e-1171.15Show/hide
Query:  WRPWGFLFNCIERPNELEFPYELG-------IYDEDDEFQENDSEFLQSKTV
        WRPWGFLF+CIERPNEL FPY  G       IYDE DE QENDSEFLQS+T+
Subjt:  WRPWGFLFNCIERPNELEFPYELG-------IYDEDDEFQENDSEFLQSKTV
QXU76199.1 Ycf2 [Biebersteinia heterostemon]1.2e-1171.15Show/hide
Query:  WRPWGFLFNCIERPNELEFPYELG-------IYDEDDEFQENDSEFLQSKTV
        WRPWGFLF+CIERPNEL FPY  G       IYDE DE QENDSEFLQS+T+
Subjt:  WRPWGFLFNCIERPNELEFPYELG-------IYDEDDEFQENDSEFLQSKTV
QZH43672.1 Ycf2 [Clausena anisum-olens]1.2e-1171.15Show/hide
Query:  WRPWGFLFNCIERPNELEFPYELG-------IYDEDDEFQENDSEFLQSKTV
        WRPWGFLF+CIERPNEL FPY  G       IYDE DE QENDSEFLQS+T+
Subjt:  WRPWGFLFNCIERPNELEFPYELG-------IYDEDDEFQENDSEFLQSKTV
YP_009262354.1 hypothetical chloroplast RF2 [Spondias tuberosa]1.2e-1171.15Show/hide
Query:  WRPWGFLFNCIERPNELEFPYELG-------IYDEDDEFQENDSEFLQSKTV
        WRPWGFLF+CIERPNEL FPY  G       IYDE DE QENDSEFLQS+T+
Subjt:  WRPWGFLFNCIERPNELEFPYELG-------IYDEDDEFQENDSEFLQSKTV
YP_010143466.1 Ycf2 [Peganum harmala]1.2e-1171.15Show/hide
Query:  WRPWGFLFNCIERPNELEFPYELG-------IYDEDDEFQENDSEFLQSKTV
        WRPWGFLF+CIERPNEL FPY  G       IYDE DE QENDSEFLQS+T+
Subjt:  WRPWGFLFNCIERPNELEFPYELG-------IYDEDDEFQENDSEFLQSKTV
TrEMBL top hitse value%identityAlignment
A0A159BNP4 Protein Ycf25.8e-1271.15Show/hide
Query:  WRPWGFLFNCIERPNELEFPYELG-------IYDEDDEFQENDSEFLQSKTV
        WRPWGFLF+CIERPNEL FPY  G       IYDE DE QENDSEFLQS+T+
Subjt:  WRPWGFLFNCIERPNELEFPYELG-------IYDEDDEFQENDSEFLQSKTV
A0A1L2JIZ1 Protein Ycf25.8e-1271.15Show/hide
Query:  WRPWGFLFNCIERPNELEFPYELG-------IYDEDDEFQENDSEFLQSKTV
        WRPWGFLF+CIERPNEL FPY  G       IYDE DE QENDSEFLQS+T+
Subjt:  WRPWGFLFNCIERPNELEFPYELG-------IYDEDDEFQENDSEFLQSKTV
A0A6M8AWG8 Protein Ycf25.8e-1271.15Show/hide
Query:  WRPWGFLFNCIERPNELEFPYELG-------IYDEDDEFQENDSEFLQSKTV
        WRPWGFLF+CIERPNEL FPY  G       IYDE DE QENDSEFLQS+T+
Subjt:  WRPWGFLFNCIERPNELEFPYELG-------IYDEDDEFQENDSEFLQSKTV
A0A7G9IWI4 Protein Ycf25.8e-1271.15Show/hide
Query:  WRPWGFLFNCIERPNELEFPYELG-------IYDEDDEFQENDSEFLQSKTV
        WRPWGFLF+CIERPNEL FPY  G       IYDE DE QENDSEFLQS+T+
Subjt:  WRPWGFLFNCIERPNELEFPYELG-------IYDEDDEFQENDSEFLQSKTV
A0A7L9CVW6 Protein Ycf25.8e-1271.15Show/hide
Query:  WRPWGFLFNCIERPNELEFPYELG-------IYDEDDEFQENDSEFLQSKTV
        WRPWGFLF+CIERPNEL FPY  G       IYDE DE QENDSEFLQS+T+
Subjt:  WRPWGFLFNCIERPNELEFPYELG-------IYDEDDEFQENDSEFLQSKTV
SwissProt top hitse value%identityAlignment
B2LMN7 Protein Ycf21.3e-1371.15Show/hide
Query:  WRPWGFLFNCIERPNELEFPY-------ELGIYDEDDEFQENDSEFLQSKTV
        WRPWGFLF+CIERPNEL FPY       +  IYDE+DE QENDSEFLQS TV
Subjt:  WRPWGFLFNCIERPNELEFPY-------ELGIYDEDDEFQENDSEFLQSKTV
P09976 Protein Ycf23.0e-1369.23Show/hide
Query:  WRPWGFLFNCIERPNELEFPY-------ELGIYDEDDEFQENDSEFLQSKTV
        WRPWGFLF+CIERPNEL FPY       +  IYDE+DE QENDSEFLQS T+
Subjt:  WRPWGFLFNCIERPNELEFPY-------ELGIYDEDDEFQENDSEFLQSKTV
Q09MB4 Protein Ycf21.6e-1471.15Show/hide
Query:  WRPWGFLFNCIERPNELEFPYELG-------IYDEDDEFQENDSEFLQSKTV
        WRPWGFLF+CIERPNEL FPY  G       IYDE DE QENDSEFLQS+T+
Subjt:  WRPWGFLFNCIERPNELEFPYELG-------IYDEDDEFQENDSEFLQSKTV
Q33BV3 Protein Ycf23.0e-1369.23Show/hide
Query:  WRPWGFLFNCIERPNELEFPY-------ELGIYDEDDEFQENDSEFLQSKTV
        WRPWGFLF+CIERPNEL FPY       +  IYDE+DE QENDSEFLQS T+
Subjt:  WRPWGFLFNCIERPNELEFPY-------ELGIYDEDDEFQENDSEFLQSKTV
Q3C1N4 Protein Ycf23.0e-1369.23Show/hide
Query:  WRPWGFLFNCIERPNELEFPY-------ELGIYDEDDEFQENDSEFLQSKTV
        WRPWGFLF+CIERPNEL FPY       +  IYDE+DE QENDSEFLQS T+
Subjt:  WRPWGFLFNCIERPNELEFPY-------ELGIYDEDDEFQENDSEFLQSKTV
Arabidopsis top hitse value%identityAlignment
ATCG00860.1 Chloroplast Ycf2;ATPase, AAA type, core1.5e-1267.31Show/hide
Query:  WRPWGFLFNCIERPNELEFPYELG-------IYDEDDEFQENDSEFLQSKTV
        WRP GFLF+CIERPNEL FPY  G       IYDE  E QENDSEFLQS T+
Subjt:  WRPWGFLFNCIERPNELEFPYELG-------IYDEDDEFQENDSEFLQSKTV
ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core1.5e-1267.31Show/hide
Query:  WRPWGFLFNCIERPNELEFPYELG-------IYDEDDEFQENDSEFLQSKTV
        WRP GFLF+CIERPNEL FPY  G       IYDE  E QENDSEFLQS T+
Subjt:  WRPWGFLFNCIERPNELEFPYELG-------IYDEDDEFQENDSEFLQSKTV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGCGCCCTTGGGGCTTTCTATTTAATTGTATCGAAAGACCCAATGAATTGGAATTTCCCTATGAGCTAGGTATTTATGATGAAGATGATGAGTTTCAAGAGAATGATTC
AGAGTTCTTGCAGAGTAAAACAGTG
mRNA sequenceShow/hide mRNA sequence
TGGCGCCCTTGGGGCTTTCTATTTAATTGTATCGAAAGACCCAATGAATTGGAATTTCCCTATGAGCTAGGTATTTATGATGAAGATGATGAGTTTCAAGAGAATGATTC
AGAGTTCTTGCAGAGTAAAACAGTG
Protein sequenceShow/hide protein sequence
WRPWGFLFNCIERPNELEFPYELGIYDEDDEFQENDSEFLQSKTV