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MS012247 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012247
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description30S ribosomal protein S7, chloroplastic
Genome locationscaffold797:790535..790813
RNA-Seq ExpressionMS012247
SyntenyMS012247
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009536 - plastid (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000235 - Ribosomal protein S5/S7
IPR023798 - Ribosomal protein S7 domain
IPR036823 - Ribosomal protein S7 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QWY86651.1 ribosomal protein S7 [Prioria balsamifera]7.7e-1364.86Show/hide
Query:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT----ISTTTILGSLMSSTNQNHGLKLT
        KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T    ++   +LG+    T +N  LKL+
Subjt:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT----ISTTTILGSLMSSTNQNHGLKLT

YP_009441567.1 30S ribosomal protein S7 [Apostasia wallichii]1.7e-1251.58Show/hide
Query:  HLLYH---SVSWELLQ---KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIQRQSQ
        H+L H   S++++++    KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T      +  L+ ++ +  G  +  Q  S+
Subjt:  HLLYH---SVSWELLQ---KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIQRQSQ

YP_009767708.1 ribosomal protein S7 [Neoapaloxylon tuberosum]1.0e-1260.53Show/hide
Query:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIQRQSQ
        KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T      +  L+ ++ +  G K+  Q  S+
Subjt:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIQRQSQ

YP_009771869.1 ribosomal protein S7 [Baphia racemosa]1.3e-1261.84Show/hide
Query:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT----ISTTTILGSLMSSTNQNHGLKLTIQ
        KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T    ++   +LG+     N+N   KL+ +
Subjt:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT----ISTTTILGSLMSSTNQNHGLKLTIQ

YP_009916954.1 ribosomal protein S7 [Primula pellucida]1.0e-1251.58Show/hide
Query:  HLLYH---SVSWELL---QKKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIQRQSQ
        H+L H   S++++++    KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T      +  L+S++ +  G  ++ +  S+
Subjt:  HLLYH---SVSWELL---QKKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIQRQSQ

TrEMBL top hitse value%identityAlignment
A0A3G1V8W7 30S ribosomal protein S7, chloroplastic8.3e-1351.58Show/hide
Query:  HLLYH---SVSWELLQ---KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIQRQSQ
        H+L H   S++++++    KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T      +  L+ ++ +  G  +  Q  S+
Subjt:  HLLYH---SVSWELLQ---KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIQRQSQ

A0A6H0E8F4 Ribosomal protein S74.9e-1360.53Show/hide
Query:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIQRQSQ
        KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T      +  L+ ++ +  G K+  Q  S+
Subjt:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIQRQSQ

A0A6H0ELS5 Ribosomal protein S76.3e-1361.84Show/hide
Query:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT----ISTTTILGSLMSSTNQNHGLKLTIQ
        KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T    ++   +LG+     N+N   KL+ +
Subjt:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT----ISTTTILGSLMSSTNQNHGLKLTIQ

A0A7G0XC77 30S ribosomal protein S7, chloroplastic4.9e-1351.58Show/hide
Query:  HLLYH---SVSWELL---QKKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIQRQSQ
        H+L H   S++++++    KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T      +  L+S++ +  G  ++ +  S+
Subjt:  HLLYH---SVSWELL---QKKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIQRQSQ

A0A7L7S0N2 30S ribosomal protein S7, chloroplastic8.3e-1351.58Show/hide
Query:  HLLYH---SVSWELLQ---KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIQRQSQ
        H+L H   S++++++    KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T      +  L+ ++ +  G  +  Q  S+
Subjt:  HLLYH---SVSWELLQ---KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIQRQSQ

SwissProt top hitse value%identityAlignment
P82129 30S ribosomal protein S7, chloroplastic8.5e-1556.47Show/hide
Query:  SVSWELLQ---KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT----ISTTTILGSLMSSTNQNHGLKLT
        S+++++L    KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T    ++   +LG+      +N   KL+
Subjt:  SVSWELLQ---KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT----ISTTTILGSLMSSTNQNHGLKLT

Q67IG9 30S ribosomal protein S7, chloroplastic5.0e-1559.21Show/hide
Query:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIQRQSQ
        KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T      +  L+ ++ +  G  +  Q  S+
Subjt:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIQRQSQ

Q6EM62 30S ribosomal protein S7, chloroplastic5.0e-1563.51Show/hide
Query:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT----ISTTTILGSLMSSTNQNHGLKLT
        KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T    ++   +LG+      +N  LKL+
Subjt:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT----ISTTTILGSLMSSTNQNHGLKLT

Q9GFN2 30S ribosomal protein S7, chloroplastic5.0e-1563.51Show/hide
Query:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT----ISTTTILGSLMSSTNQNHGLKLT
        KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T    ++   +LG+      +N  LKL+
Subjt:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT----ISTTTILGSLMSSTNQNHGLKLT

Q9TM55 30S ribosomal protein S7, chloroplastic8.5e-1556.47Show/hide
Query:  SVSWELLQ---KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT----ISTTTILGSLMSSTNQNHGLKLT
        S+++++L    KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T    ++   +LG+      +N   KL+
Subjt:  SVSWELLQ---KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTT----ISTTTILGSLMSSTNQNHGLKLT

Arabidopsis top hitse value%identityAlignment
ATCG00900.1 Ribosomal protein S7p/S5e family protein1.0e-1557.89Show/hide
Query:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIQRQSQ
        KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T      +  L+ ++ +  G  +  +  S+
Subjt:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIQRQSQ

ATCG01240.1 ribosomal protein S71.0e-1557.89Show/hide
Query:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIQRQSQ
        KKIQQKTETNP  VLRQAIRGVT DIAVKARRVGGSTHQVPIE+ +T      +  L+ ++ +  G  +  +  S+
Subjt:  KKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIQRQSQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGATCTTCACAACACCTCCTCTACCATAGTGTGAGCTGGGAGCTGCTCCAGAAAAAGATTCAACAAAAGACAGAAACAAATCCACGAGATGTTTTACGTCAAGCAATACG
TGGAGTAACTCTCGATATAGCAGTAAAGGCAAGACGTGTAGGCGGATCAACTCATCAAGTTCCCATTGAAATGCCGACCACTATATCAACCACTACGATATTGGGCTCTT
TAATGAGTTCCACGAACCAGAACCACGGGCTAAAACTTACGATTCAAAGACAAAGTCAG
mRNA sequenceShow/hide mRNA sequence
AGATCTTCACAACACCTCCTCTACCATAGTGTGAGCTGGGAGCTGCTCCAGAAAAAGATTCAACAAAAGACAGAAACAAATCCACGAGATGTTTTACGTCAAGCAATACG
TGGAGTAACTCTCGATATAGCAGTAAAGGCAAGACGTGTAGGCGGATCAACTCATCAAGTTCCCATTGAAATGCCGACCACTATATCAACCACTACGATATTGGGCTCTT
TAATGAGTTCCACGAACCAGAACCACGGGCTAAAACTTACGATTCAAAGACAAAGTCAG
Protein sequenceShow/hide protein sequence
RSSQHLLYHSVSWELLQKKIQQKTETNPRDVLRQAIRGVTLDIAVKARRVGGSTHQVPIEMPTTISTTTILGSLMSSTNQNHGLKLTIQRQSQ