CuGenDBv2

Gene ID	MS012262
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Photosystem I P700 chlorophyll a apoprotein A1
Genome location	scaffold797:951718..951894
RNA-Seq Expression	MS012262
Synteny	MS012262
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0022900 - electron transport chain (biological process) GO:0009522 - photosystem I (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0000287 - magnesium ion binding (molecular function) GO:0009055 - electron transfer activity (molecular function) GO:0016168 - chlorophyll binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	IPR001280 - Photosystem I PsaA/PsaB IPR036408 - Photosystem I PsaA/PsaB superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAF5791290.1 putative photosystem I PsaA/PsaB [Helianthus annuus]

1.4e-15

81.36

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Query:  WQELIESIVSTHNKLKVAPVTQSRALSIAQGRVEGVTHYLIGGIATTCTLFLARIIIVG
        WQELIESIV  HNKLKVAP TQ RALSI QGRV GVTHYL+GGIATT   FLARII VG
Subjt:  WQELIESIVSTHNKLKVAPVTQSRALSIAQGRVEGVTHYLIGGIATTCTLFLARIIIVG

KAG6515866.1 hypothetical protein ZIOFF_026300 [Zingiber officinale]

1.4e-15

81.36

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Query:  WQELIESIVSTHNKLKVAPVTQSRALSIAQGRVEGVTHYLIGGIATTCTLFLARIIIVG
        WQELIESIV  HNKLKVAP TQ RALSI QGRV GVTHYL+GGIATT   FLARII VG
Subjt:  WQELIESIVSTHNKLKVAPVTQSRALSIAQGRVEGVTHYLIGGIATTCTLFLARIIIVG

KJB74368.1 hypothetical protein B456_011G290700 [Gossypium raimondii]

4.7e-16

83.05

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Query:  WQELIESIVSTHNKLKVAPVTQSRALSIAQGRVEGVTHYLIGGIATTCTLFLARIIIVG
        WQELIESIV  HNKLKVAPVTQ RALSI QGRV GVTHYL+GGIATT   FLARII VG
Subjt:  WQELIESIVSTHNKLKVAPVTQSRALSIAQGRVEGVTHYLIGGIATTCTLFLARIIIVG

QHO42903.1 Photosystem I P700 chlorophyll a apoprotein [Arachis hypogaea]

1.1e-15

81.36

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Query:  WQELIESIVSTHNKLKVAPVTQSRALSIAQGRVEGVTHYLIGGIATTCTLFLARIIIVG
        WQELIESIV  HNKLKVAP TQ RALSI QGR  GVTHYL+GGIATT T FLARII VG
Subjt:  WQELIESIVSTHNKLKVAPVTQSRALSIAQGRVEGVTHYLIGGIATTCTLFLARIIIVG

YP_010027381.1 photosystem I P700 apoprotein A1 [Rhoiptelea chiliantha]

1.4e-15

79.66

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Query:  WQELIESIVSTHNKLKVAPVTQSRALSIAQGRVEGVTHYLIGGIATTCTLFLARIIIVG
        WQELIESIV  HNKLKVAP TQ RALSI QGR  GVTHYL+GGIATT   FLARII+VG
Subjt:  WQELIESIVSTHNKLKVAPVTQSRALSIAQGRVEGVTHYLIGGIATTCTLFLARIIIVG

TrEMBL top hits

e value

%identity

Alignment

A0A0D2TF51 Uncharacterized protein

2.3e-16

83.05

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Query:  WQELIESIVSTHNKLKVAPVTQSRALSIAQGRVEGVTHYLIGGIATTCTLFLARIIIVG
        WQELIESIV  HNKLKVAPVTQ RALSI QGRV GVTHYL+GGIATT   FLARII VG
Subjt:  WQELIESIVSTHNKLKVAPVTQSRALSIAQGRVEGVTHYLIGGIATTCTLFLARIIIVG

A0A0K1HR83 Photosystem I P700 chlorophyll a apoprotein A1

6.6e-16

79.66

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Query:  WQELIESIVSTHNKLKVAPVTQSRALSIAQGRVEGVTHYLIGGIATTCTLFLARIIIVG
        WQELIESIV  HNKLKVAP TQ RALSI QGR  GVTHYL+GGIATT   FLARII+VG
Subjt:  WQELIESIVSTHNKLKVAPVTQSRALSIAQGRVEGVTHYLIGGIATTCTLFLARIIIVG

A0A1Z2R6P4 Photosystem I P700 chlorophyll a apoprotein A1

6.6e-16

79.66

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Query:  WQELIESIVSTHNKLKVAPVTQSRALSIAQGRVEGVTHYLIGGIATTCTLFLARIIIVG
        WQELIESIV  HNKLKVAP TQ RALSI QGR  GVTHYL+GGIATT   FLARII+VG
Subjt:  WQELIESIVSTHNKLKVAPVTQSRALSIAQGRVEGVTHYLIGGIATTCTLFLARIIIVG

A0A251TWI7 Putative photosystem I PsaA/PsaB

6.6e-16

81.36

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Query:  WQELIESIVSTHNKLKVAPVTQSRALSIAQGRVEGVTHYLIGGIATTCTLFLARIIIVG
        WQELIESIV  HNKLKVAP TQ RALSI QGRV GVTHYL+GGIATT   FLARII VG
Subjt:  WQELIESIVSTHNKLKVAPVTQSRALSIAQGRVEGVTHYLIGGIATTCTLFLARIIIVG

A0A7M1Y6H8 Photosystem I P700 chlorophyll a apoprotein A1

6.6e-16

79.66

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Query:  WQELIESIVSTHNKLKVAPVTQSRALSIAQGRVEGVTHYLIGGIATTCTLFLARIIIVG
        WQELIESIV  HNKLKVAP TQ RALSI QGR  GVTHYL+GGIATT   FLARII+VG
Subjt:  WQELIESIVSTHNKLKVAPVTQSRALSIAQGRVEGVTHYLIGGIATTCTLFLARIIIVG

SwissProt top hits

e value

%identity

Alignment

A4QJB5 Photosystem I P700 chlorophyll a apoprotein A1

5.2e-18

79.66

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Query:  WQELIESIVSTHNKLKVAPVTQSRALSIAQGRVEGVTHYLIGGIATTCTLFLARIIIVG
        WQELIESIV  HNKLKVAP TQ RALSI QGR  GVTHYL+GGIATT   FLARII VG
Subjt:  WQELIESIVSTHNKLKVAPVTQSRALSIAQGRVEGVTHYLIGGIATTCTLFLARIIIVG

A4QJJ9 Photosystem I P700 chlorophyll a apoprotein A1

5.2e-18

79.66

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Query:  WQELIESIVSTHNKLKVAPVTQSRALSIAQGRVEGVTHYLIGGIATTCTLFLARIIIVG
        WQELIESIV  HNKLKVAP TQ RALSI QGR  GVTHYL+GGIATT   FLARII VG
Subjt:  WQELIESIVSTHNKLKVAPVTQSRALSIAQGRVEGVTHYLIGGIATTCTLFLARIIIVG

Q3V534 Photosystem I P700 chlorophyll a apoprotein A1

5.2e-18

79.66

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Query:  WQELIESIVSTHNKLKVAPVTQSRALSIAQGRVEGVTHYLIGGIATTCTLFLARIIIVG
        WQELIESIV  HNKLKVAP TQ RALSI QGR  GVTHYL+GGIATT   FLARII VG
Subjt:  WQELIESIVSTHNKLKVAPVTQSRALSIAQGRVEGVTHYLIGGIATTCTLFLARIIIVG

Q70Y03 Photosystem I P700 chlorophyll a apoprotein A1

5.2e-18

79.66

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Query:  WQELIESIVSTHNKLKVAPVTQSRALSIAQGRVEGVTHYLIGGIATTCTLFLARIIIVG
        WQELIESIV  HNKLKVAP TQ RALSI QGR  GVTHYL+GGIATT   FLARII VG
Subjt:  WQELIESIVSTHNKLKVAPVTQSRALSIAQGRVEGVTHYLIGGIATTCTLFLARIIIVG

Q9MUJ3 Photosystem I P700 chlorophyll a apoprotein A1

3.1e-18

79.66

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Query:  WQELIESIVSTHNKLKVAPVTQSRALSIAQGRVEGVTHYLIGGIATTCTLFLARIIIVG
        WQELIESIV  HNKLKVAPVTQ RALSI QGR  GVTHYL+GGIATT   FLARI+ VG
Subjt:  WQELIESIVSTHNKLKVAPVTQSRALSIAQGRVEGVTHYLIGGIATTCTLFLARIIIVG

Arabidopsis top hits

e value

%identity

Alignment

ATCG00350.1 Photosystem I, PsaA/PsaB protein

4.9e-19

79.66

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Query:  WQELIESIVSTHNKLKVAPVTQSRALSIAQGRVEGVTHYLIGGIATTCTLFLARIIIVG
        WQELIESIV  HNKLKVAP TQ RALSI QGR  GVTHYL+GGIATT   FLARII VG
Subjt:  WQELIESIVSTHNKLKVAPVTQSRALSIAQGRVEGVTHYLIGGIATTCTLFLARIIIVG

Sequences

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CDS sequence

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TGGCAAGAACTTATTGAATCTATCGTTTCGACTCATAATAAATTAAAAGTTGCTCCTGTTACTCAATCTAGAGCCTTGAGTATTGCCCAAGGACGTGTTGAAGGAGTAAC
CCATTACCTTATAGGTGGAATTGCCACAACATGTACGTTATTCTTAGCAAGAATTATTATAGTCGGA

mRNA sequence

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TGGCAAGAACTTATTGAATCTATCGTTTCGACTCATAATAAATTAAAAGTTGCTCCTGTTACTCAATCTAGAGCCTTGAGTATTGCCCAAGGACGTGTTGAAGGAGTAAC
CCATTACCTTATAGGTGGAATTGCCACAACATGTACGTTATTCTTAGCAAGAATTATTATAGTCGGA

Protein sequence

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WQELIESIVSTHNKLKVAPVTQSRALSIAQGRVEGVTHYLIGGIATTCTLFLARIIIVG

MS012262 (gene) of Bitter gourd (TR) v1 genome