CuGenDBv2

Gene ID	MS012272
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	60S ribosomal protein L37a
Genome location	scaffold797:1096108..1096345
RNA-Seq Expression	MS012272
Synteny	MS012272
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0022626 - cytosolic ribosome (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR002674 - Ribosomal protein L37ae IPR011331 - Ribosomal protein L37ae/L37e IPR011332 - Zinc-binding ribosomal protein

Homology

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GenBank top hits

e value

%identity

Alignment

RZC84644.1 hypothetical protein C5167_047429 [Papaver somniferum]

7.1e-22

94.74

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Query:  GTRYGASLRKQIKKMEISQHSKYFCELCGK-AMKRKAVGIWGCKDCGKVKAGGAYTL
        GTRYGASLRKQIKKMEISQHSKYFCE CGK A+KRKAVGIWGCKDCGKVKAGGAYTL
Subjt:  GTRYGASLRKQIKKMEISQHSKYFCELCGK-AMKRKAVGIWGCKDCGKVKAGGAYTL

RZC86607.1 hypothetical protein C5167_029961 [Papaver somniferum]

7.1e-22

94.74

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Query:  GTRYGASLRKQIKKMEISQHSKYFCELCGK-AMKRKAVGIWGCKDCGKVKAGGAYTL
        GTRYGASLRKQIKKMEISQHSKYFCE CGK A+KRKAVGIWGCKDCGKVKAGGAYTL
Subjt:  GTRYGASLRKQIKKMEISQHSKYFCELCGK-AMKRKAVGIWGCKDCGKVKAGGAYTL

XP_009370980.1 PREDICTED: uncharacterized protein LOC103960259 [Pyrus x bretschneideri]

3.2e-22

94.74

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Query:  GTRYGASLRKQIKKMEISQHSKYFCELCGK-AMKRKAVGIWGCKDCGKVKAGGAYTL
        GTRYGASLRKQIKKME+SQHSKYFCELCGK A+KRKAVGIWGCKDCGKVKAGGAYTL
Subjt:  GTRYGASLRKQIKKMEISQHSKYFCELCGK-AMKRKAVGIWGCKDCGKVKAGGAYTL

XP_026425620.1 60S ribosomal protein L37a-like isoform X1 [Papaver somniferum]

7.1e-22

94.74

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Query:  GTRYGASLRKQIKKMEISQHSKYFCELCGK-AMKRKAVGIWGCKDCGKVKAGGAYTL
        GTRYGASLRKQIKKMEISQHSKYFCE CGK A+KRKAVGIWGCKDCGKVKAGGAYTL
Subjt:  GTRYGASLRKQIKKMEISQHSKYFCELCGK-AMKRKAVGIWGCKDCGKVKAGGAYTL

XP_026425627.1 60S ribosomal protein L37a-like isoform X2 [Papaver somniferum]

7.1e-22

94.74

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Query:  GTRYGASLRKQIKKMEISQHSKYFCELCGK-AMKRKAVGIWGCKDCGKVKAGGAYTL
        GTRYGASLRKQIKKMEISQHSKYFCE CGK A+KRKAVGIWGCKDCGKVKAGGAYTL
Subjt:  GTRYGASLRKQIKKMEISQHSKYFCELCGK-AMKRKAVGIWGCKDCGKVKAGGAYTL

TrEMBL top hits

e value

%identity

Alignment

A0A1U7XSD1 60S ribosomal protein L37a

4.5e-22

92.98

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Query:  GTRYGASLRKQIKKMEISQHSKYFCELCGK-AMKRKAVGIWGCKDCGKVKAGGAYTL
        GTRYGASLRKQIKKME+SQHSKYFCE CGK A+KRKAVGIWGCKDCGKVKAGGAYTL
Subjt:  GTRYGASLRKQIKKMEISQHSKYFCELCGK-AMKRKAVGIWGCKDCGKVKAGGAYTL

A0A4Y7IGR9 Uncharacterized protein

3.5e-22

94.74

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Query:  GTRYGASLRKQIKKMEISQHSKYFCELCGK-AMKRKAVGIWGCKDCGKVKAGGAYTL
        GTRYGASLRKQIKKMEISQHSKYFCE CGK A+KRKAVGIWGCKDCGKVKAGGAYTL
Subjt:  GTRYGASLRKQIKKMEISQHSKYFCELCGK-AMKRKAVGIWGCKDCGKVKAGGAYTL

A0A4Y7LGM0 Uncharacterized protein

3.5e-22

94.74

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Query:  GTRYGASLRKQIKKMEISQHSKYFCELCGK-AMKRKAVGIWGCKDCGKVKAGGAYTL
        GTRYGASLRKQIKKMEISQHSKYFCE CGK A+KRKAVGIWGCKDCGKVKAGGAYTL
Subjt:  GTRYGASLRKQIKKMEISQHSKYFCELCGK-AMKRKAVGIWGCKDCGKVKAGGAYTL

A0A6J1ICH2 60S ribosomal protein L37a

4.5e-22

92.98

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Query:  GTRYGASLRKQIKKMEISQHSKYFCELCGK-AMKRKAVGIWGCKDCGKVKAGGAYTL
        GTRYGASLRKQIKKME+SQHSKYFCE CGK A+KRKAVGIWGCKDCGKVKAGGAYTL
Subjt:  GTRYGASLRKQIKKMEISQHSKYFCELCGK-AMKRKAVGIWGCKDCGKVKAGGAYTL

K4CND1 Uncharacterized protein

4.5e-22

92.98

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Query:  GTRYGASLRKQIKKMEISQHSKYFCELCGK-AMKRKAVGIWGCKDCGKVKAGGAYTL
        GTRYGASLRKQIKKME+SQHSKYFCE CGK A+KRKAVGIWGCKDCGKVKAGGAYTL
Subjt:  GTRYGASLRKQIKKMEISQHSKYFCELCGK-AMKRKAVGIWGCKDCGKVKAGGAYTL

SwissProt top hits

e value

%identity

Alignment

P0DKK1 60S ribosomal protein L37a-1

2.1e-24

91.23

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Query:  GTRYGASLRKQIKKMEISQHSKYFCELCGK-AMKRKAVGIWGCKDCGKVKAGGAYTL
        GTRYGASLRKQIKKME+SQHSKYFCE CGK A+KRKAVGIWGCKDCGKVKAGGAYT+
Subjt:  GTRYGASLRKQIKKMEISQHSKYFCELCGK-AMKRKAVGIWGCKDCGKVKAGGAYTL

P0DKK2 60S ribosomal protein L37a-2

2.1e-24

91.23

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Query:  GTRYGASLRKQIKKMEISQHSKYFCELCGK-AMKRKAVGIWGCKDCGKVKAGGAYTL
        GTRYGASLRKQIKKME+SQHSKYFCE CGK A+KRKAVGIWGCKDCGKVKAGGAYT+
Subjt:  GTRYGASLRKQIKKMEISQHSKYFCELCGK-AMKRKAVGIWGCKDCGKVKAGGAYTL

P43209 60S ribosomal protein L37a

1.0e-23

87.72

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Query:  GTRYGASLRKQIKKMEISQHSKYFCELCGK-AMKRKAVGIWGCKDCGKVKAGGAYTL
        GTRYGAS+RKQIKKME+SQHSKYFCE CGK  +KRKAVGIWGCKDCGKVKAGGAYT+
Subjt:  GTRYGASLRKQIKKMEISQHSKYFCELCGK-AMKRKAVGIWGCKDCGKVKAGGAYTL

Q8RXU5 60S ribosomal protein L37a-2

1.0e-23

87.72

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Query:  GTRYGASLRKQIKKMEISQHSKYFCELCGK-AMKRKAVGIWGCKDCGKVKAGGAYTL
        GTRYGAS+RKQIKKME+SQHSKYFCE CGK  +KRKAVGIWGCKDCGKVKAGGAYT+
Subjt:  GTRYGASLRKQIKKMEISQHSKYFCELCGK-AMKRKAVGIWGCKDCGKVKAGGAYTL

Q9ZRS8 60S ribosomal protein L37a

3.6e-24

91.23

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Query:  GTRYGASLRKQIKKMEISQHSKYFCELCGK-AMKRKAVGIWGCKDCGKVKAGGAYTL
        GTRYGASLRKQIKKME+SQHSK+FCE CGK A+KRKAVGIWGCKDCGKVKAGGAYTL
Subjt:  GTRYGASLRKQIKKMEISQHSKYFCELCGK-AMKRKAVGIWGCKDCGKVKAGGAYTL

Arabidopsis top hits

e value

%identity

Alignment

AT3G10950.1 Zinc-binding ribosomal protein family protein

2.1e-24

85.96

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Query:  GTRYGASLRKQIKKMEISQHSKYFCELCGK-AMKRKAVGIWGCKDCGKVKAGGAYTL
        GTRYGASLRKQIKKME+SQH+KYFCE CGK ++KRK VGIWGCKDCGKVKAGGAYT+
Subjt:  GTRYGASLRKQIKKMEISQHSKYFCELCGK-AMKRKAVGIWGCKDCGKVKAGGAYTL

AT3G60245.1 Zinc-binding ribosomal protein family protein

7.3e-25

87.72

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Query:  GTRYGASLRKQIKKMEISQHSKYFCELCGK-AMKRKAVGIWGCKDCGKVKAGGAYTL
        GTRYGAS+RKQIKKME+SQHSKYFCE CGK  +KRKAVGIWGCKDCGKVKAGGAYT+
Subjt:  GTRYGASLRKQIKKMEISQHSKYFCELCGK-AMKRKAVGIWGCKDCGKVKAGGAYTL

Sequences

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CDS sequence

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GGTACCCGATATGGGGCCAGTCTACGGAAGCAGATTAAGAAGATGGAAATCAGTCAGCACAGCAAATACTTCTGTGAGTTATGTGGAAAGGCAATGAAGAGAAAGGCAGT
TGGAATTTGGGGCTGCAAAGATTGTGGTAAAGTTAAAGCCGGTGGTGCCTACACTCTC

mRNA sequence

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GGTACCCGATATGGGGCCAGTCTACGGAAGCAGATTAAGAAGATGGAAATCAGTCAGCACAGCAAATACTTCTGTGAGTTATGTGGAAAGGCAATGAAGAGAAAGGCAGT
TGGAATTTGGGGCTGCAAAGATTGTGGTAAAGTTAAAGCCGGTGGTGCCTACACTCTC

Protein sequence

Show/hide protein sequence

GTRYGASLRKQIKKMEISQHSKYFCELCGKAMKRKAVGIWGCKDCGKVKAGGAYTL

MS012272 (gene) of Bitter gourd (TR) v1 genome