CuGenDBv2

Gene ID	MS012282
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Golgin subfamily A member 6-like protein 4, putative
Genome location	scaffold797:1197282..1199837
RNA-Seq Expression	MS012282
Synteny	MS012282
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004148363.1 uncharacterized protein LOC101210706 [Cucumis sativus]

4.4e-58

84.21

Show/hide

Query:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEEKKAAMRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKMQLE
        MDKLL+FGRRALFYVRVLSGYEERRIRS R +L+KRLKQAEE+K+A+RK+PEQ ILGEVRRMVEEMQ LNKKLEETE+AIEEYFKPIDKEAE LMK+QLE
Subjt:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEEKKAAMRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKMQLE

Query:  GEERKMKDMVKVMQQQALFEKAEAGKVTTSTLQTDKNQHNQNLASDKTPQKT
        GEER M+DMVKVMQQQAL EKAEAGKVT+  LQT+KNQ  QNLASD TPQKT
Subjt:  GEERKMKDMVKVMQQQALFEKAEAGKVTTSTLQTDKNQHNQNLASDKTPQKT

XP_008465889.1 PREDICTED: uncharacterized protein LOC103503473 [Cucumis melo]

1.8e-59

88.16

Show/hide

Query:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEEKKAAMRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKMQLE
        MDKLL+FGRRALFY+RVLSGYEERRIRSFRL L+KRLKQAEE+KAA+RK+PEQAILGEVRRMVEEMQTLNK LEETESAIEEYFKPIDKEAEALMK+QLE
Subjt:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEEKKAAMRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKMQLE

Query:  GEERKMKDMVKVMQQQALFEKAEAGKVTTSTLQTDKNQHNQNLASDKTPQKT
        GEER MKDMVKVMQQQALF++AEAGKV T+TLQT+KNQ  QNLASD TPQKT
Subjt:  GEERKMKDMVKVMQQQALFEKAEAGKVTTSTLQTDKNQHNQNLASDKTPQKT

XP_022131261.1 uncharacterized protein LOC111004517 [Momordica charantia]

5.0e-70

100

Show/hide

Query:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEEKKAAMRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKMQLE
        MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEEKKAAMRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKMQLE
Subjt:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEEKKAAMRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKMQLE

Query:  GEERKMKDMVKVMQQQALFEKAEAGKVTTSTLQTDKNQHNQNLASDKTPQKT
        GEERKMKDMVKVMQQQALFEKAEAGKVTTSTLQTDKNQHNQNLASDKTPQKT
Subjt:  GEERKMKDMVKVMQQQALFEKAEAGKVTTSTLQTDKNQHNQNLASDKTPQKT

XP_023532534.1 uncharacterized protein LOC111794666 [Cucurbita pepo subsp. pepo]

4.3e-53

86.62

Show/hide

Query:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEEKKAAMRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKMQLE
        MD++LEFGRRALFYV+VLSGYEERRIRSFRLELEKRLK+AEE+KAA+R+IPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKE EALM++QLE
Subjt:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEEKKAAMRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKMQLE

Query:  GEERKMKDMVKVMQQQALFEKAEAGKVTTSTLQTDKNQHNQN
        GEER MK+MVKVMQQQAL EK EA KV  STLQTDKNQ NQ+
Subjt:  GEERKMKDMVKVMQQQALFEKAEAGKVTTSTLQTDKNQHNQN

XP_038886906.1 uncharacterized protein LOC120077104 [Benincasa hispida]

9.2e-64

94.74

Show/hide

Query:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEEKKAAMRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKMQLE
        MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEE+KAA+RKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMK+QLE
Subjt:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEEKKAAMRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKMQLE

Query:  GEERKMKDMVKVMQQQALFEKAEAGKVTTSTLQTDKNQHNQNLASDKTPQKT
        GEER MKDMVKVMQQQALFEKAEAGKV TSTLQTDKNQ  QNLASD TPQKT
Subjt:  GEERKMKDMVKVMQQQALFEKAEAGKVTTSTLQTDKNQHNQNLASDKTPQKT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LKE0 Uncharacterized protein

2.1e-58

84.21

Show/hide

Query:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEEKKAAMRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKMQLE
        MDKLL+FGRRALFYVRVLSGYEERRIRS R +L+KRLKQAEE+K+A+RK+PEQ ILGEVRRMVEEMQ LNKKLEETE+AIEEYFKPIDKEAE LMK+QLE
Subjt:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEEKKAAMRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKMQLE

Query:  GEERKMKDMVKVMQQQALFEKAEAGKVTTSTLQTDKNQHNQNLASDKTPQKT
        GEER M+DMVKVMQQQAL EKAEAGKVT+  LQT+KNQ  QNLASD TPQKT
Subjt:  GEERKMKDMVKVMQQQALFEKAEAGKVTTSTLQTDKNQHNQNLASDKTPQKT

A0A1S3CPZ1 uncharacterized protein LOC103503473

8.7e-60

88.16

Show/hide

Query:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEEKKAAMRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKMQLE
        MDKLL+FGRRALFY+RVLSGYEERRIRSFRL L+KRLKQAEE+KAA+RK+PEQAILGEVRRMVEEMQTLNK LEETESAIEEYFKPIDKEAEALMK+QLE
Subjt:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEEKKAAMRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKMQLE

Query:  GEERKMKDMVKVMQQQALFEKAEAGKVTTSTLQTDKNQHNQNLASDKTPQKT
        GEER MKDMVKVMQQQALF++AEAGKV T+TLQT+KNQ  QNLASD TPQKT
Subjt:  GEERKMKDMVKVMQQQALFEKAEAGKVTTSTLQTDKNQHNQNLASDKTPQKT

A0A6J1BQI2 uncharacterized protein LOC111004517

2.4e-70

100

Show/hide

Query:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEEKKAAMRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKMQLE
        MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEEKKAAMRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKMQLE
Subjt:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEEKKAAMRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKMQLE

Query:  GEERKMKDMVKVMQQQALFEKAEAGKVTTSTLQTDKNQHNQNLASDKTPQKT
        GEERKMKDMVKVMQQQALFEKAEAGKVTTSTLQTDKNQHNQNLASDKTPQKT
Subjt:  GEERKMKDMVKVMQQQALFEKAEAGKVTTSTLQTDKNQHNQNLASDKTPQKT

A0A6J1H1D7 uncharacterized protein LOC111459545

1.3e-52

85.92

Show/hide

Query:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEEKKAAMRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKMQLE
        MDK+LEFGRRALFYV+VLSGYEERRIRS RLELEKRLK+AEE+KAA+R+IPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKE EALM++QLE
Subjt:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEEKKAAMRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKMQLE

Query:  GEERKMKDMVKVMQQQALFEKAEAGKVTTSTLQTDKNQHNQN
        GEER MK+MVKV+QQQAL EK EA KV  STLQTDKNQ NQ+
Subjt:  GEERKMKDMVKVMQQQALFEKAEAGKVTTSTLQTDKNQHNQN

A0A6J1K1F5 uncharacterized protein LOC111491540

4.6e-53

86.62

Show/hide

Query:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEEKKAAMRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKMQLE
        MDK+LE GRRALFYV+VLSGYEERRIRSFRLELEKRLK+AEE+KAA+RKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKE E LM++QLE
Subjt:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEEKKAAMRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKMQLE

Query:  GEERKMKDMVKVMQQQALFEKAEAGKVTTSTLQTDKNQHNQN
        GEER MK+MVKVMQQQAL EK EA KV  STLQTDKNQ NQ+
Subjt:  GEERKMKDMVKVMQQQALFEKAEAGKVTTSTLQTDKNQHNQN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G17010.1 unknown protein

7.8e-37

53.75

Show/hide

Query:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEEKKAAMRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKMQLE
        M+KLLE+GR+A+FYVRVLSGYEERRIRS+RL+LEKR++QA ++K  + ++PEQ +L EVRRMVEEMQ LNK++E TE+ IE+YFKPIDK A  +M++QLE
Subjt:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEEKKAAMRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKMQLE

Query:  GEERKMKDMVKVMQQQALFEKAEAGK---------VTTSTLQTDKNQHNQNLASDKTPQK
        GE++ M  M+   QQ+A+ +  EA K         VTT     DK Q +++ A++K+  K
Subjt:  GEERKMKDMVKVMQQQALFEKAEAGK---------VTTSTLQTDKNQHNQNLASDKTPQK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGACAAGCTTTTAGAGTTTGGACGAAGGGCCCTCTTCTACGTTAGGGTTCTCTCCGGCTACGAAGAGCGCCGGATTCGATCGTTTAGGTTGGAGCTCGAGAAGCGTCT
CAAGCAGGCAGAGGAAAAAAAAGCTGCCATGAGAAAGATACCTGAGCAGGCCATCTTAGGAGAAGTTCGCCGTATGGTGGAGGAGATGCAAACTCTTAATAAAAAGTTAG
AGGAAACAGAGTCTGCCATTGAAGAGTACTTCAAGCCAATTGACAAAGAAGCAGAGGCACTAATGAAAATGCAGCTTGAAGGAGAAGAGAGAAAAATGAAGGACATGGTT
AAAGTCATGCAGCAACAGGCTTTGTTTGAAAAGGCTGAGGCAGGTAAAGTTACCACCTCTACCCTTCAAACTGACAAAAACCAACACAACCAAAACCTTGCATCTGACAA
AACCCCTCAAAAAACT

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEEKKAAMRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKMQLEGEERKMKDMV
KVMQQQALFEKAEAGKVTTSTLQTDKNQHNQNLASDKTPQKT

MS012282 (gene) of Bitter gourd (TR) v1 genome