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MS012304 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012304
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDNA helicase
Genome locationscaffold317:58671..58882
RNA-Seq ExpressionMS012304
SyntenyMS012304
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0032508 - DNA duplex unwinding (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003678 - DNA helicase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150020.1 ATP-dependent DNA helicase homolog RECG, chloroplastic isoform X1 [Momordica charantia]2.5e-1695.74Show/hide
Query:  LRFHYVLSMLPKLCLRTKHKYAGKLFEEVDKYGAASISNRAKLLNKV
        +RFHYVLSMLPKLCLRTKHKYAGKLFEEVDKYGAASISNRAKLLNK+
Subjt:  LRFHYVLSMLPKLCLRTKHKYAGKLFEEVDKYGAASISNRAKLLNKV
XP_022150022.1 ATP-dependent DNA helicase homolog RECG, chloroplastic isoform X2 [Momordica charantia]2.5e-1695.74Show/hide
Query:  LRFHYVLSMLPKLCLRTKHKYAGKLFEEVDKYGAASISNRAKLLNKV
        +RFHYVLSMLPKLCLRTKHKYAGKLFEEVDKYGAASISNRAKLLNK+
Subjt:  LRFHYVLSMLPKLCLRTKHKYAGKLFEEVDKYGAASISNRAKLLNKV
XP_022150023.1 ATP-dependent DNA helicase homolog RECG, chloroplastic isoform X3 [Momordica charantia]2.5e-1695.74Show/hide
Query:  LRFHYVLSMLPKLCLRTKHKYAGKLFEEVDKYGAASISNRAKLLNKV
        +RFHYVLSMLPKLCLRTKHKYAGKLFEEVDKYGAASISNRAKLLNK+
Subjt:  LRFHYVLSMLPKLCLRTKHKYAGKLFEEVDKYGAASISNRAKLLNKV
XP_022150024.1 ATP-dependent DNA helicase homolog RECG, chloroplastic isoform X4 [Momordica charantia]2.5e-1695.74Show/hide
Query:  LRFHYVLSMLPKLCLRTKHKYAGKLFEEVDKYGAASISNRAKLLNKV
        +RFHYVLSMLPKLCLRTKHKYAGKLFEEVDKYGAASISNRAKLLNK+
Subjt:  LRFHYVLSMLPKLCLRTKHKYAGKLFEEVDKYGAASISNRAKLLNKV
XP_031742292.1 ATP-dependent DNA helicase homolog RECG, chloroplastic isoform X2 [Cucumis sativus]2.5e-1674.63Show/hide
Query:  MVKYQIQTGRLAHH-FCLRFHYVLSMLPKLCLRTKHKYAGKLFEEVDKYGAASISNRAKLLNKVGKL
        M KYQIQT RLAHH FCLR HYVLSMLPKLCLRTKHK+AG LF E+ KY  A+I  R KLL K+GKL
Subjt:  MVKYQIQTGRLAHH-FCLRFHYVLSMLPKLCLRTKHKYAGKLFEEVDKYGAASISNRAKLLNKVGKL
TrEMBL top hitse value%identityAlignment
A0A1S3C041 DNA helicase1.5e-1471.88Show/hide
Query:  MVKYQIQTGRLAHH-FCLRFHYVLSMLPKLCLRTKHKYAGKLFEEVDKYGAASISNRAKLLNKV
        M KYQIQT RLAHH FCLR HYVLSMLPKLCLRTKH++AG LF E+ KY   SI  R KLL K+
Subjt:  MVKYQIQTGRLAHH-FCLRFHYVLSMLPKLCLRTKHKYAGKLFEEVDKYGAASISNRAKLLNKV
A0A6J1D7B7 DNA helicase1.2e-1695.74Show/hide
Query:  LRFHYVLSMLPKLCLRTKHKYAGKLFEEVDKYGAASISNRAKLLNKV
        +RFHYVLSMLPKLCLRTKHKYAGKLFEEVDKYGAASISNRAKLLNK+
Subjt:  LRFHYVLSMLPKLCLRTKHKYAGKLFEEVDKYGAASISNRAKLLNKV
A0A6J1D8C5 DNA helicase1.2e-1695.74Show/hide
Query:  LRFHYVLSMLPKLCLRTKHKYAGKLFEEVDKYGAASISNRAKLLNKV
        +RFHYVLSMLPKLCLRTKHKYAGKLFEEVDKYGAASISNRAKLLNK+
Subjt:  LRFHYVLSMLPKLCLRTKHKYAGKLFEEVDKYGAASISNRAKLLNKV
A0A6J1D8T6 DNA helicase1.2e-1695.74Show/hide
Query:  LRFHYVLSMLPKLCLRTKHKYAGKLFEEVDKYGAASISNRAKLLNKV
        +RFHYVLSMLPKLCLRTKHKYAGKLFEEVDKYGAASISNRAKLLNK+
Subjt:  LRFHYVLSMLPKLCLRTKHKYAGKLFEEVDKYGAASISNRAKLLNKV
A0A6J1D9K8 DNA helicase1.2e-1695.74Show/hide
Query:  LRFHYVLSMLPKLCLRTKHKYAGKLFEEVDKYGAASISNRAKLLNKV
        +RFHYVLSMLPKLCLRTKHKYAGKLFEEVDKYGAASISNRAKLLNK+
Subjt:  LRFHYVLSMLPKLCLRTKHKYAGKLFEEVDKYGAASISNRAKLLNKV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G01440.1 DEAD/DEAH box RNA helicase family protein1.1e-0438.3Show/hide
Query:  HYVLSMLPKLCLRTKHKYAGKLFEEVDKYGAASISNRAKLLNKVGKL
        ++  S +  +  R+KHKY+  L E+V+KY +A + N++KL+ KV  L
Subjt:  HYVLSMLPKLCLRTKHKYAGKLFEEVDKYGAASISNRAKLLNKVGKL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAATACCAAATTCAGACAGGTAGATTAGCGCATCACTTCTGTCTCAGGTTCCATTATGTTCTCTCGATGCTACCAAAGTTGTGCTTAAGAACAAAGCACAAGTA
TGCAGGTAAGTTGTTTGAAGAAGTAGACAAATATGGCGCTGCAAGCATATCGAATCGGGCAAAGTTGCTAAATAAGGTAGGGAAATTGTATGTAAATATT
mRNA sequenceShow/hide mRNA sequence
ATGGTGAAATACCAAATTCAGACAGGTAGATTAGCGCATCACTTCTGTCTCAGGTTCCATTATGTTCTCTCGATGCTACCAAAGTTGTGCTTAAGAACAAAGCACAAGTA
TGCAGGTAAGTTGTTTGAAGAAGTAGACAAATATGGCGCTGCAAGCATATCGAATCGGGCAAAGTTGCTAAATAAGGTAGGGAAATTGTATGTAAATATT
Protein sequenceShow/hide protein sequence
MVKYQIQTGRLAHHFCLRFHYVLSMLPKLCLRTKHKYAGKLFEEVDKYGAASISNRAKLLNKVGKLYVNI