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MS012310 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012310
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationscaffold317:175881..176273
RNA-Seq ExpressionMS012310
SyntenyMS012310
Gene Ontology termsGO:0006793 - phosphorus metabolic process (biological process)
GO:0016772 - transferase activity, transferring phosphorus-containing groups (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065397.1 putative LRR receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa]3.1e-2057Show/hide
Query:  MGDLTSYIVSGLDAEYLPITCQINEKVGITWQELYATLITFENTLINLNVVNQPTETGNMTANIAYNRQNTLSQGNNKNQFN-----KGQGRGYINKNLR
        +GDLTSY++  LDAEY PIT   NEK  +TWQ L++TL+TFEN LIN NVVN  TE  NMTAN+ +NRQN+ +Q N++NQ+      +GQGRG  N N R
Subjt:  MGDLTSYIVSGLDAEYLPITCQINEKVGITWQELYATLITFENTLINLNVVNQPTETGNMTANIAYNRQNTLSQGNNKNQFN-----KGQGRGYINKNLR

XP_022142770.1 uncharacterized protein LOC111012809 [Momordica charantia]2.9e-1850.79Show/hide
Query:  LTSYIVSGLDAEYLPITCQINEKVGITWQELYATLITFENTLINLNVVNQPTETGNMTANIAYNRQNTLSQGNNKNQFNKGQGRGYINKNLRGNYKPKGR
        L S +++GL+AEYL I CQIN K  I+WQE++ATLITFEN LI+LN V+    +G  +AN  YN+    S   N N   +GQGRG   +N RG    + R
Subjt:  LTSYIVSGLDAEYLPITCQINEKVGITWQELYATLITFENTLINLNVVNQPTETGNMTANIAYNRQNTLSQGNNKNQFNKGQGRGYINKNLRGNYKPKGR

Query:  GGRGGNIRTNNSKPICQLCGKIGHVA
        GGR    R+N+S+P CQ+CGKIGH+A
Subjt:  GGRGGNIRTNNSKPICQLCGKIGHVA

XP_022157748.1 uncharacterized protein LOC111024384 isoform X1 [Momordica charantia]1.4e-2049.23Show/hide
Query:  LTSYIVSGLDAEYLPITCQINEKVGITWQELYATLITFENTLINLNVVNQPTETG--NMTANIAYNRQNTLSQGN-NKNQFNKGQGRGYINKN-LRGNYK
        L S ++SGL+AEYLPI CQI  K   +WQEL+ATL+TFENTL+ LN+V+  T  G  + + N  +++QN++     +++Q  +GQGRG  N N  + N +
Subjt:  LTSYIVSGLDAEYLPITCQINEKVGITWQELYATLITFENTLINLNVVNQPTETG--NMTANIAYNRQNTLSQGN-NKNQFNKGQGRGYINKN-LRGNYK

Query:  PKGRGGRGGNIRTNNSKPICQLCGKIGHVA
         +GR GR    R NNSKP CQLCGK GH+A
Subjt:  PKGRGGRGGNIRTNNSKPICQLCGKIGHVA

XP_022157750.1 uncharacterized protein LOC111024384 isoform X2 [Momordica charantia]1.4e-2049.23Show/hide
Query:  LTSYIVSGLDAEYLPITCQINEKVGITWQELYATLITFENTLINLNVVNQPTETG--NMTANIAYNRQNTLSQGN-NKNQFNKGQGRGYINKN-LRGNYK
        L S ++SGL+AEYLPI CQI  K   +WQEL+ATL+TFENTL+ LN+V+  T  G  + + N  +++QN++     +++Q  +GQGRG  N N  + N +
Subjt:  LTSYIVSGLDAEYLPITCQINEKVGITWQELYATLITFENTLINLNVVNQPTETG--NMTANIAYNRQNTLSQGN-NKNQFNKGQGRGYINKN-LRGNYK

Query:  PKGRGGRGGNIRTNNSKPICQLCGKIGHVA
         +GR GR    R NNSKP CQLCGK GH+A
Subjt:  PKGRGGRGGNIRTNNSKPICQLCGKIGHVA

XP_030485696.1 uncharacterized protein LOC115702365 [Cannabis sativa]2.4e-1241.35Show/hide
Query:  LTSYIVSGLDAEYLPITCQI--NEKVGITWQELYATLITFENTLINLNVVNQPTETGNMT-----ANIAYNRQNTLSQGNNKNQFNKGQGRGYINKNLRG
        L S ++S LDAEYL I CQ+    K+G+TWQE+  TL++F++ L  LN++    +  N T     A  A  +QN  +   + N  N   GRG    N RG
Subjt:  LTSYIVSGLDAEYLPITCQI--NEKVGITWQELYATLITFENTLINLNVVNQPTETGNMT-----ANIAYNRQNTLSQGNNKNQFNKGQGRGYINKNLRG

Query:  NYKPKGRGGRGGNIRTNNSKPICQLCGKIGHVA
            +GR GRGG     NSKP CQ+CG+ GH A
Subjt:  NYKPKGRGGRGGNIRTNNSKPICQLCGKIGHVA

TrEMBL top hitse value%identityAlignment
A0A5A7TBM5 UDP-glucose:glycoprotein glucosyltransferase isoform X13.8e-1138.89Show/hide
Query:  LTSYIVSGLDAEYLPITCQINEKVGITWQELYATLITFENTLINLNVVNQPTETGNMTANIAYNRQNTLSQGNNKNQFNKGQGRGYINKNLRGNYKPKGR
        L S ++  +DAEYLPITC +NEK  +TW   ++  + FE TL++ N++ Q TE    T + A+      SQ   +++ N  Q R    +  RGN      
Subjt:  LTSYIVSGLDAEYLPITCQINEKVGITWQELYATLITFENTLINLNVVNQPTETGNMTANIAYNRQNTLSQGNNKNQFNKGQGRGYINKNLRGNYKPKGR

Query:  GGRGGNIRTNNSKPICQLCGKIGHVA
         GRG     NN KP CQ+CGK GH A
Subjt:  GGRGGNIRTNNSKPICQLCGKIGHVA

A0A5A7VE87 Putative LRR receptor-like serine/threonine-protein kinase1.5e-2057Show/hide
Query:  MGDLTSYIVSGLDAEYLPITCQINEKVGITWQELYATLITFENTLINLNVVNQPTETGNMTANIAYNRQNTLSQGNNKNQFN-----KGQGRGYINKNLR
        +GDLTSY++  LDAEY PIT   NEK  +TWQ L++TL+TFEN LIN NVVN  TE  NMTAN+ +NRQN+ +Q N++NQ+      +GQGRG  N N R
Subjt:  MGDLTSYIVSGLDAEYLPITCQINEKVGITWQELYATLITFENTLINLNVVNQPTETGNMTANIAYNRQNTLSQGNNKNQFN-----KGQGRGYINKNLR

A0A6J1CLV9 uncharacterized protein LOC1110128091.4e-1850.79Show/hide
Query:  LTSYIVSGLDAEYLPITCQINEKVGITWQELYATLITFENTLINLNVVNQPTETGNMTANIAYNRQNTLSQGNNKNQFNKGQGRGYINKNLRGNYKPKGR
        L S +++GL+AEYL I CQIN K  I+WQE++ATLITFEN LI+LN V+    +G  +AN  YN+    S   N N   +GQGRG   +N RG    + R
Subjt:  LTSYIVSGLDAEYLPITCQINEKVGITWQELYATLITFENTLINLNVVNQPTETGNMTANIAYNRQNTLSQGNNKNQFNKGQGRGYINKNLRGNYKPKGR

Query:  GGRGGNIRTNNSKPICQLCGKIGHVA
        GGR    R+N+S+P CQ+CGKIGH+A
Subjt:  GGRGGNIRTNNSKPICQLCGKIGHVA

A0A6J1DTZ7 uncharacterized protein LOC111024384 isoform X26.8e-2149.23Show/hide
Query:  LTSYIVSGLDAEYLPITCQINEKVGITWQELYATLITFENTLINLNVVNQPTETG--NMTANIAYNRQNTLSQGN-NKNQFNKGQGRGYINKN-LRGNYK
        L S ++SGL+AEYLPI CQI  K   +WQEL+ATL+TFENTL+ LN+V+  T  G  + + N  +++QN++     +++Q  +GQGRG  N N  + N +
Subjt:  LTSYIVSGLDAEYLPITCQINEKVGITWQELYATLITFENTLINLNVVNQPTETG--NMTANIAYNRQNTLSQGN-NKNQFNKGQGRGYINKN-LRGNYK

Query:  PKGRGGRGGNIRTNNSKPICQLCGKIGHVA
         +GR GR    R NNSKP CQLCGK GH+A
Subjt:  PKGRGGRGGNIRTNNSKPICQLCGKIGHVA

A0A6J1DU77 uncharacterized protein LOC111024384 isoform X16.8e-2149.23Show/hide
Query:  LTSYIVSGLDAEYLPITCQINEKVGITWQELYATLITFENTLINLNVVNQPTETG--NMTANIAYNRQNTLSQGN-NKNQFNKGQGRGYINKN-LRGNYK
        L S ++SGL+AEYLPI CQI  K   +WQEL+ATL+TFENTL+ LN+V+  T  G  + + N  +++QN++     +++Q  +GQGRG  N N  + N +
Subjt:  LTSYIVSGLDAEYLPITCQINEKVGITWQELYATLITFENTLINLNVVNQPTETG--NMTANIAYNRQNTLSQGN-NKNQFNKGQGRGYINKN-LRGNYK

Query:  PKGRGGRGGNIRTNNSKPICQLCGKIGHVA
         +GR GR    R NNSKP CQLCGK GH+A
Subjt:  PKGRGGRGGNIRTNNSKPICQLCGKIGHVA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGATCTTACATCCTATATTGTATCCGGTTTAGATGCGGAATATCTACCCATCACATGTCAAATTAATGAGAAGGTGGGAATAACATGGCAAGAATTATATGCAAC
CCTCATCACCTTTGAAAACACCCTCATCAACCTGAATGTGGTCAATCAACCTACTGAGACTGGCAACATGACAGCCAATATAGCCTATAATAGGCAAAATACACTCAGTC
AAGGGAACAACAAAAATCAGTTCAACAAAGGCCAAGGCAGAGGCTACATCAATAAGAATTTGAGAGGGAATTACAAACCTAAAGGACGAGGCGGAAGAGGAGGAAATATC
AGAACAAATAACTCAAAACCTATATGTCAGCTATGCGGGAAAATTGGTCATGTGGCAGGCAAT
mRNA sequenceShow/hide mRNA sequence
ATGGGAGATCTTACATCCTATATTGTATCCGGTTTAGATGCGGAATATCTACCCATCACATGTCAAATTAATGAGAAGGTGGGAATAACATGGCAAGAATTATATGCAAC
CCTCATCACCTTTGAAAACACCCTCATCAACCTGAATGTGGTCAATCAACCTACTGAGACTGGCAACATGACAGCCAATATAGCCTATAATAGGCAAAATACACTCAGTC
AAGGGAACAACAAAAATCAGTTCAACAAAGGCCAAGGCAGAGGCTACATCAATAAGAATTTGAGAGGGAATTACAAACCTAAAGGACGAGGCGGAAGAGGAGGAAATATC
AGAACAAATAACTCAAAACCTATATGTCAGCTATGCGGGAAAATTGGTCATGTGGCAGGCAAT
Protein sequenceShow/hide protein sequence
MGDLTSYIVSGLDAEYLPITCQINEKVGITWQELYATLITFENTLINLNVVNQPTETGNMTANIAYNRQNTLSQGNNKNQFNKGQGRGYINKNLRGNYKPKGRGGRGGNI
RTNNSKPICQLCGKIGHVAGN