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MS012323 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012323
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCLAVATA3/ESR (CLE)-related protein 16
Genome locationscaffold317:376283..376588
RNA-Seq ExpressionMS012323
SyntenyMS012323
Gene Ontology termsGO:0048731 - system development (biological process)
InterPro domainsIPR033249 - CLAVATA3/ESR (CLE)-related protein, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ESR61476.1 hypothetical protein CICLE_v10017256mg [Citrus clementina]1.2e-0644.21Show/hide
Query:  RRRRRAGAAAAIFFICLILVVSRMRLSSATVRTPT---AAAAHRKTHIFETEELFRPPARLRAG------GGARNDVVYEDDKRVVHTGPNPLHN
        RRRR AGA AA FF  +IL+ S + L  A     T   ++ + RKT  F TE  F  P    +G             VYEDDKR++HTGPNPLHN
Subjt:  RRRRRAGAAAAIFFICLILVVSRMRLSSATVRTPT---AAAAHRKTHIFETEELFRPPARLRAG------GGARNDVVYEDDKRVVHTGPNPLHN
KAA0063335.1 putative Clavata3/esr-related 16 [Cucumis melo var. makuwa]1.6e-2463.39Show/hide
Query:  MRVGVVERARNGGGAVRRRRRAGAAAAIFFICLILVVSRMRLSSATVRTPTAAA------AHRKTHIFETEELFRPPARLRAGGGARN----DVVYEDDK
        MRVG VER RNGG    R+R AGA AAIFFI LIL+VSRMRLSSA ++     A       HRKTHIFETEE+F+PPA  +  GG  N    D+VYEDDK
Subjt:  MRVGVVERARNGGGAVRRRRRAGAAAAIFFICLILVVSRMRLSSATVRTPTAAA------AHRKTHIFETEELFRPPARLRAGGGARN----DVVYEDDK

Query:  RVVHTGPNPLHN
        RV+HTGPNPLHN
Subjt:  RVVHTGPNPLHN
KAE8648231.1 hypothetical protein Csa_018474 [Cucumis sativus]4.8e-1658.82Show/hide
Query:  MRVGVVERARNGGGAVRRRRRAGAAAAIFFICLILVVSRMRLSSATVR------TPTAAAAHRKTHIFETEELFRPPARLRAGGGARN----DVVYEDDK
        MRVG VER RNGG    R+  AGA AAIFFI LILVVSRMRLSSA  +         +   HRKTHIFETEE+F+PPA  +  GG  N    D+VYEDDK
Subjt:  MRVGVVERARNGGGAVRRRRRAGAAAAIFFICLILVVSRMRLSSATVR------TPTAAAAHRKTHIFETEELFRPPARLRAGGGARN----DVVYEDDK

Query:  RV
        R+
Subjt:  RV
KAG6600814.1 CLAVATA3/ESR (CLE)-related protein 16, partial [Cucurbita argyrosperma subsp. sororia]4.5e-2264.22Show/hide
Query:  MRVGVVERARNGG-GAVRRRRRAGAAAAIFFICLILVVSRMRLSSATVR---TPT---AAAAHRKTHIFETEELFRPPARLRAGGGARNDVVYEDDKRVV
        MRVG VER RNGG G  R+   A  AAAIFFICLI V+SRM LSSA VR    PT   +A  HRKTH+FETEE+F+PPA  +       D+VYEDDKRVV
Subjt:  MRVGVVERARNGG-GAVRRRRRAGAAAAIFFICLILVVSRMRLSSATVR---TPT---AAAAHRKTHIFETEELFRPPARLRAGGGARNDVVYEDDKRVV

Query:  HTGPNPLHN
        HTGPNPLHN
Subjt:  HTGPNPLHN
KDO64624.1 hypothetical protein CISIN_1g048706mg, partial [Citrus sinensis]1.2e-0644.21Show/hide
Query:  RRRRRAGAAAAIFFICLILVVSRMRLSSATVRTPT---AAAAHRKTHIFETEELFRPPARLRAG------GGARNDVVYEDDKRVVHTGPNPLHN
        RRRR AGA AA FF  +IL+ S + L  A     T   ++ + RKT  F TE  F  P    +G             VYEDDKR++HTGPNPLHN
Subjt:  RRRRRAGAAAAIFFICLILVVSRMRLSSATVRTPT---AAAAHRKTHIFETEELFRPPARLRAG------GGARNDVVYEDDKRVVHTGPNPLHN
TrEMBL top hitse value%identityAlignment
A0A067FB56 Uncharacterized protein (Fragment)5.7e-0744.21Show/hide
Query:  RRRRRAGAAAAIFFICLILVVSRMRLSSATVRTPT---AAAAHRKTHIFETEELFRPPARLRAG------GGARNDVVYEDDKRVVHTGPNPLHN
        RRRR AGA AA FF  +IL+ S + L  A     T   ++ + RKT  F TE  F  P    +G             VYEDDKR++HTGPNPLHN
Subjt:  RRRRRAGAAAAIFFICLILVVSRMRLSSATVRTPT---AAAAHRKTHIFETEELFRPPARLRAG------GGARNDVVYEDDKRVVHTGPNPLHN
A0A0A0KIX6 Uncharacterized protein1.5e-2362.5Show/hide
Query:  MRVGVVERARNGGGAVRRRRRAGAAAAIFFICLILVVSRMRLSSATVR------TPTAAAAHRKTHIFETEELFRPPARLRAGGGARN----DVVYEDDK
        MRVG VER RNGG    R+  AGA AAIFFI LILVVSRMRLSSA  +         +   HRKTHIFETEE+F+PPA  +  GG  N    D+VYEDDK
Subjt:  MRVGVVERARNGGGAVRRRRRAGAAAAIFFICLILVVSRMRLSSATVR------TPTAAAAHRKTHIFETEELFRPPARLRAGGGARN----DVVYEDDK

Query:  RVVHTGPNPLHN
        RV+HTGPNPLHN
Subjt:  RVVHTGPNPLHN
A0A5A7VBQ7 Putative Clavata3/esr-related 167.9e-2563.39Show/hide
Query:  MRVGVVERARNGGGAVRRRRRAGAAAAIFFICLILVVSRMRLSSATVRTPTAAA------AHRKTHIFETEELFRPPARLRAGGGARN----DVVYEDDK
        MRVG VER RNGG    R+R AGA AAIFFI LIL+VSRMRLSSA ++     A       HRKTHIFETEE+F+PPA  +  GG  N    D+VYEDDK
Subjt:  MRVGVVERARNGGGAVRRRRRAGAAAAIFFICLILVVSRMRLSSATVRTPTAAA------AHRKTHIFETEELFRPPARLRAGGGARN----DVVYEDDK

Query:  RVVHTGPNPLHN
        RV+HTGPNPLHN
Subjt:  RVVHTGPNPLHN
A0A5N6QZE0 Uncharacterized protein3.7e-0640.43Show/hide
Query:  RRRAGAAAAIFFICLILVVSRMRLSSATVRTPTA---AAAHRKTHIFETEELFRPPARLRAG----GGARN---DVVYEDDKRVVHTGPNPLHN
        R R+GA+AAIF + + L+ +++ L  A     T     +  RK    ET  LF  P+         GGA+N   D +Y DDKR++HTGPNPLHN
Subjt:  RRRAGAAAAIFFICLILVVSRMRLSSATVRTPTA---AAAHRKTHIFETEELFRPPARLRAG----GGARN---DVVYEDDKRVVHTGPNPLHN
V4UGP5 Uncharacterized protein5.7e-0744.21Show/hide
Query:  RRRRRAGAAAAIFFICLILVVSRMRLSSATVRTPT---AAAAHRKTHIFETEELFRPPARLRAG------GGARNDVVYEDDKRVVHTGPNPLHN
        RRRR AGA AA FF  +IL+ S + L  A     T   ++ + RKT  F TE  F  P    +G             VYEDDKR++HTGPNPLHN
Subjt:  RRRRRAGAAAAIFFICLILVVSRMRLSSATVRTPT---AAAAHRKTHIFETEELFRPPARLRAG------GGARNDVVYEDDKRVVHTGPNPLHN
SwissProt top hitse value%identityAlignment
Q8L9H6 CLAVATA3/ESR (CLE)-related protein 177.4e-0435.06Show/hide
Query:  ICLILVVSRMRLSSATVRTPTAAAAHRKTHIFETEELFRPPARLRAG-----GGARNDVVYEDDKRVVHTGPNPLHN
        +C  L      +S   V + +A+  + + H+  +     P   LR       G    D +Y DDKRVVHTGPNPLHN
Subjt:  ICLILVVSRMRLSSATVRTPTAAAAHRKTHIFETEELFRPPARLRAG-----GGARNDVVYEDDKRVVHTGPNPLHN
Q8S8M2 CLAVATA3/ESR (CLE)-related protein 161.6e-0640.21Show/hide
Query:  RRRRRAGAA-----AAIFFICLILVVSRMRLSSATVRTPT--AAAAHRKTHIFETEELFRPPARLRAGGGAR----NDVVYEDDKRVVHTGPNPLHN
        RRRRRA        AA+FF C I V ++  +SS+ +  P    +   +  H  E      P A +   G  R     D VY+DDKR+VHTGPNPLHN
Subjt:  RRRRRAGAA-----AAIFFICLILVVSRMRLSSATVRTPT--AAAAHRKTHIFETEELFRPPARLRAGGGAR----NDVVYEDDKRVVHTGPNPLHN
Arabidopsis top hitse value%identityAlignment
AT1G70895.1 CLAVATA3/ESR-RELATED 175.3e-0535.06Show/hide
Query:  ICLILVVSRMRLSSATVRTPTAAAAHRKTHIFETEELFRPPARLRAG-----GGARNDVVYEDDKRVVHTGPNPLHN
        +C  L      +S   V + +A+  + + H+  +     P   LR       G    D +Y DDKRVVHTGPNPLHN
Subjt:  ICLILVVSRMRLSSATVRTPTAAAAHRKTHIFETEELFRPPARLRAG-----GGARNDVVYEDDKRVVHTGPNPLHN
AT1G70895.2 CLAVATA3/ESR-RELATED 175.3e-0535.06Show/hide
Query:  ICLILVVSRMRLSSATVRTPTAAAAHRKTHIFETEELFRPPARLRAG-----GGARNDVVYEDDKRVVHTGPNPLHN
        +C  L      +S   V + +A+  + + H+  +     P   LR       G    D +Y DDKRVVHTGPNPLHN
Subjt:  ICLILVVSRMRLSSATVRTPTAAAAHRKTHIFETEELFRPPARLRAG-----GGARNDVVYEDDKRVVHTGPNPLHN
AT2G01505.1 CLAVATA3/ESR-RELATED 161.1e-0740.21Show/hide
Query:  RRRRRAGAA-----AAIFFICLILVVSRMRLSSATVRTPT--AAAAHRKTHIFETEELFRPPARLRAGGGAR----NDVVYEDDKRVVHTGPNPLHN
        RRRRRA        AA+FF C I V ++  +SS+ +  P    +   +  H  E      P A +   G  R     D VY+DDKR+VHTGPNPLHN
Subjt:  RRRRRAGAA-----AAIFFICLILVVSRMRLSSATVRTPT--AAAAHRKTHIFETEELFRPPARLRAGGGAR----NDVVYEDDKRVVHTGPNPLHN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGTGGGTGTAGTAGAGAGGGCAAGAAACGGAGGAGGAGCTGTTAGGAGACGGCGGCGGGCCGGCGCCGCGGCGGCAATTTTCTTCATCTGCCTCATTTTGGTCGT
CTCTCGGATGAGGCTCTCCTCCGCCACCGTACGGACGCCCACCGCCGCCGCCGCCCACCGTAAAACCCACATTTTCGAAACGGAGGAGCTCTTCAGGCCGCCGGCCAGGT
TGAGAGCTGGCGGCGGCGCGAGAAACGACGTCGTATACGAGGACGATAAGCGGGTCGTCCACACCGGCCCAAACCCACTCCACAAT
mRNA sequenceShow/hide mRNA sequence
ATGAGAGTGGGTGTAGTAGAGAGGGCAAGAAACGGAGGAGGAGCTGTTAGGAGACGGCGGCGGGCCGGCGCCGCGGCGGCAATTTTCTTCATCTGCCTCATTTTGGTCGT
CTCTCGGATGAGGCTCTCCTCCGCCACCGTACGGACGCCCACCGCCGCCGCCGCCCACCGTAAAACCCACATTTTCGAAACGGAGGAGCTCTTCAGGCCGCCGGCCAGGT
TGAGAGCTGGCGGCGGCGCGAGAAACGACGTCGTATACGAGGACGATAAGCGGGTCGTCCACACCGGCCCAAACCCACTCCACAAT
Protein sequenceShow/hide protein sequence
MRVGVVERARNGGGAVRRRRRAGAAAAIFFICLILVVSRMRLSSATVRTPTAAAAHRKTHIFETEELFRPPARLRAGGGARNDVVYEDDKRVVHTGPNPLHN