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MS012328 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012328
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionconserved peptide upstream open reading frame 37
Genome locationscaffold63:25558..25716
RNA-Seq ExpressionMS012328
SyntenyMS012328
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB57311.1 hypothetical protein L484_011398 [Morus notabilis]1.2e-1395.12Show/hide
Query:  MVCQAASQTRFRALKHENGIAGKPTIVVRVIACFQPLQNCQ
        MVCQAASQTRFRALKHENGIAGKPTI+VRVIACFQPLQ+CQ
Subjt:  MVCQAASQTRFRALKHENGIAGKPTIVVRVIACFQPLQNCQ
KAE8645821.1 hypothetical protein Csa_023855, partial [Cucumis sativus]6.8e-1495.12Show/hide
Query:  MVCQAASQTRFRALKHENGIAGKPTIVVRVIACFQPLQNCQ
        MVCQAASQTRFRALKHENGIAGKPTI+V+VIACFQPLQNCQ
Subjt:  MVCQAASQTRFRALKHENGIAGKPTIVVRVIACFQPLQNCQ
KAG6576874.1 Transcription factor basic helix-loop-helix 143, partial [Cucurbita argyrosperma subsp. sororia]6.8e-1495.12Show/hide
Query:  MVCQAASQTRFRALKHENGIAGKPTIVVRVIACFQPLQNCQ
        MVCQAA+QTRFRALKHENGIAGKPTI+VRVIACFQPLQNCQ
Subjt:  MVCQAASQTRFRALKHENGIAGKPTIVVRVIACFQPLQNCQ
KAG7014898.1 hypothetical protein SDJN02_22529 [Cucurbita argyrosperma subsp. argyrosperma]6.8e-1495.12Show/hide
Query:  MVCQAASQTRFRALKHENGIAGKPTIVVRVIACFQPLQNCQ
        MVCQAA+QTRFRALKHENGIAGKPTI+VRVIACFQPLQNCQ
Subjt:  MVCQAASQTRFRALKHENGIAGKPTIVVRVIACFQPLQNCQ
XP_016901746.1 PREDICTED: uncharacterized protein LOC103495379 isoform X2 [Cucumis melo]6.8e-1495.12Show/hide
Query:  MVCQAASQTRFRALKHENGIAGKPTIVVRVIACFQPLQNCQ
        MVCQAASQTRFRALKHENGIAGKPTI+V+VIACFQPLQNCQ
Subjt:  MVCQAASQTRFRALKHENGIAGKPTIVVRVIACFQPLQNCQ
TrEMBL top hitse value%identityAlignment
A0A0A0K458 Uncharacterized protein3.3e-1495.12Show/hide
Query:  MVCQAASQTRFRALKHENGIAGKPTIVVRVIACFQPLQNCQ
        MVCQAASQTRFRALKHENGIAGKPTI+V+VIACFQPLQNCQ
Subjt:  MVCQAASQTRFRALKHENGIAGKPTIVVRVIACFQPLQNCQ
A0A0A0KVT2 Uncharacterized protein1.9e-1490.7Show/hide
Query:  MVCQAASQTRFRALKHENGIAGKPTIVVRVIACFQPLQNCQVR
        MVCQAA+QTRFRALKHENGIAGKPTI+VRVIACFQPLQNCQ +
Subjt:  MVCQAASQTRFRALKHENGIAGKPTIVVRVIACFQPLQNCQVR
A0A1S4E0J3 uncharacterized protein LOC103495379 isoform X23.3e-1495.12Show/hide
Query:  MVCQAASQTRFRALKHENGIAGKPTIVVRVIACFQPLQNCQ
        MVCQAASQTRFRALKHENGIAGKPTI+V+VIACFQPLQNCQ
Subjt:  MVCQAASQTRFRALKHENGIAGKPTIVVRVIACFQPLQNCQ
A0A6A1V4N5 BHLH domain-containing protein9.5e-1486.36Show/hide
Query:  MVCQAASQTRFRALKHENGIAGKPTIVVRVIACFQPLQNCQVRQ
        MVCQAASQTRFRALKHE+GIAGKPTI+VRVIACFQPLQ+CQ  +
Subjt:  MVCQAASQTRFRALKHENGIAGKPTIVVRVIACFQPLQNCQVRQ
W9R7U4 Uncharacterized protein5.6e-1495.12Show/hide
Query:  MVCQAASQTRFRALKHENGIAGKPTIVVRVIACFQPLQNCQ
        MVCQAASQTRFRALKHENGIAGKPTI+VRVIACFQPLQ+CQ
Subjt:  MVCQAASQTRFRALKHENGIAGKPTIVVRVIACFQPLQNCQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G09461.1 conserved peptide upstream open reading frame 432.2e-1069.05Show/hide
Query:  MVCQAASQTRFRALKHE-NGIAGKPTIVVRVIACFQPLQNCQ
        MV Q+A QTRFR  K+E NG + +PTIVVRVIACFQP+ NCQ
Subjt:  MVCQAASQTRFRALKHE-NGIAGKPTIVVRVIACFQPLQNCQ
AT5G50011.1 conserved peptide upstream open reading frame 375.2e-1278.05Show/hide
Query:  MVCQAASQTRFRALKHENGIAGKPTIVVRVIACFQPLQNCQ
        MVCQ+A QTRFR LKHE+GI G   IVVRVIACFQPLQ+CQ
Subjt:  MVCQAASQTRFRALKHENGIAGKPTIVVRVIACFQPLQNCQ
AT5G64341.1 conserved peptide upstream open reading frame 406.3e-1055.1Show/hide
Query:  MVCQAASQTRFRALKHENGIAGKPTIVVRVIACFQPLQNCQVRQLSFCL
        MVCQ+  +TRFR LK+E G A + TIVVRVI C+QP+ NCQ       L
Subjt:  MVCQAASQTRFRALKHENGIAGKPTIVVRVIACFQPLQNCQVRQLSFCL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTGCCAAGCAGCAAGCCAGACAAGATTTCGGGCTTTGAAACATGAGAATGGGATTGCAGGAAAACCAACAATTGTAGTTAGAGTGATCGCATGCTTTCAACCTTT
GCAGAATTGTCAGGTTCGTCAACTCAGTTTTTGCCTCCTGGTTTTGCTT
mRNA sequenceShow/hide mRNA sequence
ATGGTGTGCCAAGCAGCAAGCCAGACAAGATTTCGGGCTTTGAAACATGAGAATGGGATTGCAGGAAAACCAACAATTGTAGTTAGAGTGATCGCATGCTTTCAACCTTT
GCAGAATTGTCAGGTTCGTCAACTCAGTTTTTGCCTCCTGGTTTTGCTT
Protein sequenceShow/hide protein sequence
MVCQAASQTRFRALKHENGIAGKPTIVVRVIACFQPLQNCQVRQLSFCLLVLL