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MS012333 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012333
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGlycine alanine and asparagine-rich protein-like
Genome locationscaffold63:40326..40709
RNA-Seq ExpressionMS012333
SyntenyMS012333
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044283.1 beta carbonic anhydrase 5 [Cucumis melo var. makuwa]5.3e-1246.09Show/hide
Query:  DGNVVGMVG---------IGRFGSAAPTGMLPGTKLGSGGKLGRDGRVVGNVGCGRDGMEGMPDPVAGIGTVGKGGRGGNAVGLGSEGIGGNGDGVVCRR
        DG+VVG+ G         +GR G+A   GM  G +LGSGG +      +G  G G+ GM+G+      +G VG GGRGG A GLGS+GIGG   G+VCRR
Subjt:  DGNVVGMVG---------IGRFGSAAPTGMLPGTKLGSGGKLGRDGRVVGNVGCGRDGMEGMPDPVAGIGTVGKGGRGGNAVGLGSEGIGGNGDGVVCRR

Query:  WRAARPTCMVENSNVAMKAMIKELEEAI
         R  R    +EN+ V MKA +K+L+EAI
Subjt:  WRAARPTCMVENSNVAMKAMIKELEEAI

OMO63526.1 hypothetical protein COLO4_32367 [Corchorus olitorius]1.5e-1145.45Show/hide
Query:  IDGNVVGMVG----IGR-----FGSAAPTGMLPGTKLGSGGK---LGRDGRVVGNVGCGRDGMEGMPDPVAGIGTVGKGGRGGNAVGLGSEGIGGNGDGV
        +DG VVGMVG    +GR     FG+     +    +LGSGGK   LGRDG++VGNVGCGR G++               G GGN    G  GIGG+G G 
Subjt:  IDGNVVGMVG----IGR-----FGSAAPTGMLPGTKLGSGGK---LGRDGRVVGNVGCGRDGMEGMPDPVAGIGTVGKGGRGGNAVGLGSEGIGGNGDGV

Query:  VCRRWRAARPTCMVENSNVAMKAMIKELEEAI
          RRWRAARPT M+EN +    A  K+L++AI
Subjt:  VCRRWRAARPTCMVENSNVAMKAMIKELEEAI

OMO85209.1 hypothetical protein CCACVL1_10346 [Corchorus capsularis]1.3e-1045.8Show/hide
Query:  IDGNVVGMVG----IGRFG--SAAPTGMLPGT--KLGSGGK---LGRDGRVVGNVGCGRDGMEGMPDPVAGIGTVGKGGRGGNAVGLGSEGIGGNGDGVV
        +DG VVG VG    +GR G  S    G + G   +LGSGGK   LGRDG++VGNVGCGR G+                G GGN    G  GIGG+     
Subjt:  IDGNVVGMVG----IGRFG--SAAPTGMLPGT--KLGSGGK---LGRDGRVVGNVGCGRDGMEGMPDPVAGIGTVGKGGRGGNAVGLGSEGIGGNGDGVV

Query:  CRRWRAARPTCMVENSNVAMKAMIKELEEAI
         RRWRAARPT M+EN N    A  K+L++AI
Subjt:  CRRWRAARPTCMVENSNVAMKAMIKELEEAI

TYK29414.1 beta carbonic anhydrase 5 [Cucumis melo var. makuwa]5.3e-1246.09Show/hide
Query:  DGNVVGMVG---------IGRFGSAAPTGMLPGTKLGSGGKLGRDGRVVGNVGCGRDGMEGMPDPVAGIGTVGKGGRGGNAVGLGSEGIGGNGDGVVCRR
        DG+VVG+ G         +GR G+A   GM  G +LGSGG +      +G  G G+ GM+G+      +G VG GGRGG A GLGS+GIGG   G+VCRR
Subjt:  DGNVVGMVG---------IGRFGSAAPTGMLPGTKLGSGGKLGRDGRVVGNVGCGRDGMEGMPDPVAGIGTVGKGGRGGNAVGLGSEGIGGNGDGVVCRR

Query:  WRAARPTCMVENSNVAMKAMIKELEEAI
         R  R    +EN+ V MKA +K+L+EAI
Subjt:  WRAARPTCMVENSNVAMKAMIKELEEAI

XP_016901486.1 PREDICTED: uncharacterized PE-PGRS family protein PE_PGRS33, partial [Cucumis melo]5.3e-1246.09Show/hide
Query:  DGNVVGMVG---------IGRFGSAAPTGMLPGTKLGSGGKLGRDGRVVGNVGCGRDGMEGMPDPVAGIGTVGKGGRGGNAVGLGSEGIGGNGDGVVCRR
        DG+VVG+ G         +GR G+A   GM  G +LGSGG +      +G  G G+ GM+G+      +G VG GGRGG A GLGS+GIGG   G+VCRR
Subjt:  DGNVVGMVG---------IGRFGSAAPTGMLPGTKLGSGGKLGRDGRVVGNVGCGRDGMEGMPDPVAGIGTVGKGGRGGNAVGLGSEGIGGNGDGVVCRR

Query:  WRAARPTCMVENSNVAMKAMIKELEEAI
         R  R    +EN+ V MKA +K+L+EAI
Subjt:  WRAARPTCMVENSNVAMKAMIKELEEAI

TrEMBL top hitse value%identityAlignment
A0A0A0L0M4 Uncharacterized protein4.3e-1248Show/hide
Query:  IDGNVVGMVGI-GRFGSAAPTGMLPGTKLGSGGKLGRDGRVVGNVGCGRDGMEGMPDPVAGIGTVGKGGRGGNAVGLGSEGIGGNGDGVVCRRWRAARPT
        ++GN +GMVGI G+FGS         + +GSGGKL     + GNVGCG  G  G           GK G GG  VG+   G  G   GVVC RWRAA P 
Subjt:  IDGNVVGMVGI-GRFGSAAPTGMLPGTKLGSGGKLGRDGRVVGNVGCGRDGMEGMPDPVAGIGTVGKGGRGGNAVGLGSEGIGGNGDGVVCRRWRAARPT

Query:  CMVENSNVAMKAMIKELEEAIFFFF
         M+E + VA+KAMIK LE AIFF F
Subjt:  CMVENSNVAMKAMIKELEEAIFFFF

A0A1R3GZU4 Uncharacterized protein7.4e-1245.45Show/hide
Query:  IDGNVVGMVG----IGR-----FGSAAPTGMLPGTKLGSGGK---LGRDGRVVGNVGCGRDGMEGMPDPVAGIGTVGKGGRGGNAVGLGSEGIGGNGDGV
        +DG VVGMVG    +GR     FG+     +    +LGSGGK   LGRDG++VGNVGCGR G++               G GGN    G  GIGG+G G 
Subjt:  IDGNVVGMVG----IGR-----FGSAAPTGMLPGTKLGSGGK---LGRDGRVVGNVGCGRDGMEGMPDPVAGIGTVGKGGRGGNAVGLGSEGIGGNGDGV

Query:  VCRRWRAARPTCMVENSNVAMKAMIKELEEAI
          RRWRAARPT M+EN +    A  K+L++AI
Subjt:  VCRRWRAARPTCMVENSNVAMKAMIKELEEAI

A0A1S4DZT7 uncharacterized PE-PGRS family protein PE_PGRS332.5e-1246.09Show/hide
Query:  DGNVVGMVG---------IGRFGSAAPTGMLPGTKLGSGGKLGRDGRVVGNVGCGRDGMEGMPDPVAGIGTVGKGGRGGNAVGLGSEGIGGNGDGVVCRR
        DG+VVG+ G         +GR G+A   GM  G +LGSGG +      +G  G G+ GM+G+      +G VG GGRGG A GLGS+GIGG   G+VCRR
Subjt:  DGNVVGMVG---------IGRFGSAAPTGMLPGTKLGSGGKLGRDGRVVGNVGCGRDGMEGMPDPVAGIGTVGKGGRGGNAVGLGSEGIGGNGDGVVCRR

Query:  WRAARPTCMVENSNVAMKAMIKELEEAI
         R  R    +EN+ V MKA +K+L+EAI
Subjt:  WRAARPTCMVENSNVAMKAMIKELEEAI

A0A5A7TL95 Carbonic anhydrase2.5e-1246.09Show/hide
Query:  DGNVVGMVG---------IGRFGSAAPTGMLPGTKLGSGGKLGRDGRVVGNVGCGRDGMEGMPDPVAGIGTVGKGGRGGNAVGLGSEGIGGNGDGVVCRR
        DG+VVG+ G         +GR G+A   GM  G +LGSGG +      +G  G G+ GM+G+      +G VG GGRGG A GLGS+GIGG   G+VCRR
Subjt:  DGNVVGMVG---------IGRFGSAAPTGMLPGTKLGSGGKLGRDGRVVGNVGCGRDGMEGMPDPVAGIGTVGKGGRGGNAVGLGSEGIGGNGDGVVCRR

Query:  WRAARPTCMVENSNVAMKAMIKELEEAI
         R  R    +EN+ V MKA +K+L+EAI
Subjt:  WRAARPTCMVENSNVAMKAMIKELEEAI

A0A5D3E0R8 Carbonic anhydrase2.5e-1246.09Show/hide
Query:  DGNVVGMVG---------IGRFGSAAPTGMLPGTKLGSGGKLGRDGRVVGNVGCGRDGMEGMPDPVAGIGTVGKGGRGGNAVGLGSEGIGGNGDGVVCRR
        DG+VVG+ G         +GR G+A   GM  G +LGSGG +      +G  G G+ GM+G+      +G VG GGRGG A GLGS+GIGG   G+VCRR
Subjt:  DGNVVGMVG---------IGRFGSAAPTGMLPGTKLGSGGKLGRDGRVVGNVGCGRDGMEGMPDPVAGIGTVGKGGRGGNAVGLGSEGIGGNGDGVVCRR

Query:  WRAARPTCMVENSNVAMKAMIKELEEAI
         R  R    +EN+ V MKA +K+L+EAI
Subjt:  WRAARPTCMVENSNVAMKAMIKELEEAI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTGATGGGAATGTCGTAGGGATGGTCGGGATCGGGAGGTTCGGGAGTGCTGCTCCGACCGGGATGTTACCAGGGACGAAGCTCGGGAGTGGAGGTAAGTTAGGGAGAGA
TGGTAGGGTAGTTGGCAATGTTGGCTGTGGGAGGGATGGTATGGAGGGAATGCCTGATCCTGTCGCCGGGATCGGTACCGTTGGCAAGGGCGGGAGAGGAGGCAATGCAG
TCGGTTTAGGTAGCGAGGGCATCGGAGGCAACGGCGATGGAGTGGTTTGTAGGAGATGGCGAGCAGCTCGACCGACGTGCATGGTAGAAAATAGCAACGTAGCCATGAAA
GCTATGATCAAGGAGTTGGAAGAGGCCATTTTTTTCTTTTTTGGTGATGGATTT
mRNA sequenceShow/hide mRNA sequence
ATTGATGGGAATGTCGTAGGGATGGTCGGGATCGGGAGGTTCGGGAGTGCTGCTCCGACCGGGATGTTACCAGGGACGAAGCTCGGGAGTGGAGGTAAGTTAGGGAGAGA
TGGTAGGGTAGTTGGCAATGTTGGCTGTGGGAGGGATGGTATGGAGGGAATGCCTGATCCTGTCGCCGGGATCGGTACCGTTGGCAAGGGCGGGAGAGGAGGCAATGCAG
TCGGTTTAGGTAGCGAGGGCATCGGAGGCAACGGCGATGGAGTGGTTTGTAGGAGATGGCGAGCAGCTCGACCGACGTGCATGGTAGAAAATAGCAACGTAGCCATGAAA
GCTATGATCAAGGAGTTGGAAGAGGCCATTTTTTTCTTTTTTGGTGATGGATTT
Protein sequenceShow/hide protein sequence
IDGNVVGMVGIGRFGSAAPTGMLPGTKLGSGGKLGRDGRVVGNVGCGRDGMEGMPDPVAGIGTVGKGGRGGNAVGLGSEGIGGNGDGVVCRRWRAARPTCMVENSNVAMK
AMIKELEEAIFFFFGDGF