; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS012363 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012363
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSqualene monooxygenase
Genome locationscaffold63:212768..213172
RNA-Seq ExpressionMS012363
SyntenyMS012363
Gene Ontology termsGO:0016126 - sterol biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004506 - squalene monooxygenase activity (molecular function)
GO:0071949 - FAD binding (molecular function)
InterPro domainsIPR040125 - Squalene monooxygenase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MBA0565986.1 hypothetical protein [Gossypium lobatum]4.8e-2762.62Show/hide
Query:  ITYHGLQDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPL-NSNSNVTGKSFHNGLYVQRPREKAA
        IT+  LQDGRRVH+I +DLT  +R++ E+LQPG  LKL+ELGLE DCV +IDAQ+VFGY + K GK+ RL YPL N +S+V+G+SFHNG ++QR REKAA
Subjt:  ITYHGLQDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPL-NSNSNVTGKSFHNGLYVQRPREKAA

Query:  SLPKYYL
        SLP   L
Subjt:  SLPKYYL

MBA0623685.1 hypothetical protein [Gossypium davidsonii]4.8e-2762.62Show/hide
Query:  ITYHGLQDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPL-NSNSNVTGKSFHNGLYVQRPREKAA
        IT+  LQDGRRVH+I +DLT  +R++ E+LQPG  LKL+ELGLE DCV +IDAQ+VFGY + K GK+ RL YPL N +S+V+G+SFHNG ++QR REKAA
Subjt:  ITYHGLQDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPL-NSNSNVTGKSFHNGLYVQRPREKAA

Query:  SLPKYYL
        SLP   L
Subjt:  SLPKYYL

MBA0775342.1 hypothetical protein [Gossypium trilobum]1.4e-2662.26Show/hide
Query:  TYHGLQDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPL-NSNSNVTGKSFHNGLYVQRPREKAAS
        T+  LQDGRRVH+I +DLT  +R++ E+LQPG  LKL+ELGLE DCV +IDAQ+VFGY + K GK+ RL YPL N +S+V+G+SFHNG ++QR REKAAS
Subjt:  TYHGLQDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPL-NSNSNVTGKSFHNGLYVQRPREKAAS

Query:  LPKYYL
        LP   L
Subjt:  LPKYYL

XP_028754970.1 LOW QUALITY PROTEIN: squalene monooxygenase-like [Prosopis alba]1.8e-2663.37Show/hide
Query:  QDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPLNS-NSNVTGKSFHNGLYVQRPREKAASLPKYY
        +DGRRVH+I +DL+   R++ E+LQPG  LKL+ELGLE DCV +IDAQQVFGY ++K GK  RLPYPL   +S+V+G+SFHNG ++QR REKAASLPK +
Subjt:  QDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPLNS-NSNVTGKSFHNGLYVQRPREKAASLPKYY

Query:  L
        L
Subjt:  L

XP_042012570.1 squalene monooxygenase SE1-like [Salvia splendens]2.4e-2662.38Show/hide
Query:  QDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPLNS-NSNVTGKSFHNGLYVQRPREKAASLPKYY
        +DGRRVH++ +DLT  +R++ E+LQPG  LKL+ELGLE DCV DIDAQQVFGY ++K GK  +LPYPL S  ++V+G+SFHNG Y+QR REKAA+LP   
Subjt:  QDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPLNS-NSNVTGKSFHNGLYVQRPREKAASLPKYY

Query:  L
        L
Subjt:  L

TrEMBL top hitse value%identityAlignment
A0A4D8ZXX0 Squalene monooxygenase2.6e-2662.38Show/hide
Query:  QDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPLNS-NSNVTGKSFHNGLYVQRPREKAASLPKYY
        +DGRRVH+I +DLT  +R++ E+LQPG  LKL+ELGLE DCV DIDAQQVFGY ++K GK  +LPYPL S  ++V+G+SFHNG ++QR REKAA+LP   
Subjt:  QDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPLNS-NSNVTGKSFHNGLYVQRPREKAASLPKYY

Query:  L
        L
Subjt:  L

A0A4D9ADA4 Squalene monooxygenase1.2e-2662.38Show/hide
Query:  QDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPLNS-NSNVTGKSFHNGLYVQRPREKAASLPKYY
        +DGRRVH++ +DLT  +R++ E+LQPG  LKL+ELGLE DCV DIDAQQVFGY ++K GK  +LPYPL S  ++V+G+SFHNG Y+QR REKAA+LP   
Subjt:  QDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPLNS-NSNVTGKSFHNGLYVQRPREKAASLPKYY

Query:  L
        L
Subjt:  L

A0A7J8MMW3 Squalene monooxygenase (Fragment)2.3e-2762.62Show/hide
Query:  ITYHGLQDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPL-NSNSNVTGKSFHNGLYVQRPREKAA
        IT+  LQDGRRVH+I +DLT  +R++ E+LQPG  LKL+ELGLE DCV +IDAQ+VFGY + K GK+ RL YPL N +S+V+G+SFHNG ++QR REKAA
Subjt:  ITYHGLQDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPL-NSNSNVTGKSFHNGLYVQRPREKAA

Query:  SLPKYYL
        SLP   L
Subjt:  SLPKYYL

A0A7J8SCP0 Squalene monooxygenase (Fragment)2.3e-2762.62Show/hide
Query:  ITYHGLQDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPL-NSNSNVTGKSFHNGLYVQRPREKAA
        IT+  LQDGRRVH+I +DLT  +R++ E+LQPG  LKL+ELGLE DCV +IDAQ+VFGY + K GK+ RL YPL N +S+V+G+SFHNG ++QR REKAA
Subjt:  ITYHGLQDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPL-NSNSNVTGKSFHNGLYVQRPREKAA

Query:  SLPKYYL
        SLP   L
Subjt:  SLPKYYL

A0A7J9EQM4 Squalene monooxygenase (Fragment)6.7e-2762.26Show/hide
Query:  TYHGLQDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPL-NSNSNVTGKSFHNGLYVQRPREKAAS
        T+  LQDGRRVH+I +DLT  +R++ E+LQPG  LKL+ELGLE DCV +IDAQ+VFGY + K GK+ RL YPL N +S+V+G+SFHNG ++QR REKAAS
Subjt:  TYHGLQDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPL-NSNSNVTGKSFHNGLYVQRPREKAAS

Query:  LPKYYL
        LP   L
Subjt:  LPKYYL

SwissProt top hitse value%identityAlignment
B7TWW5 Squalene monooxygenase SE26.5e-2758.25Show/hide
Query:  ITYHGLQDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPLNS-NSNVTGKSFHNGLYVQRPREKAA
        + Y   +DGRRVH+I +DLT  +R++ E+LQPG  LKL+ELGLE DCV +IDAQ+VFGY ++  GK  RL YPL   +++V G+SFHNG ++QR REKAA
Subjt:  ITYHGLQDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPLNS-NSNVTGKSFHNGLYVQRPREKAA

Query:  SLP
        SLP
Subjt:  SLP

O48651 Squalene monooxygenase SE12.2e-2760.19Show/hide
Query:  ITYHGLQDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPLNS-NSNVTGKSFHNGLYVQRPREKAA
        + Y    DGRRVH+I +DLT  +R++ E+LQPG  LKL+ELGLE DCV +IDAQ+VFGY ++  GK  RL YPL   +S+V G+SFHNG +VQR REKAA
Subjt:  ITYHGLQDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPLNS-NSNVTGKSFHNGLYVQRPREKAA

Query:  SLP
        SLP
Subjt:  SLP

O81000 Squalene epoxidase 2, mitochondrial3.0e-2457.29Show/hide
Query:  QDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPLNS-NSNVTGKSFHNGLYVQRPREKAASL
        ++GRRVH+I +D +  +R++ E+LQPG  LKL+ELGLE DCV  IDAQ+V GYV+ K GK+ +L YPL + +S+V G+SFHNG +VQR REKA +L
Subjt:  QDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPLNS-NSNVTGKSFHNGLYVQRPREKAASL

Q8VYH2 Squalene epoxidase 35.5e-2659.79Show/hide
Query:  QDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPLNS-NSNVTGKSFHNGLYVQRPREKAASLP
        ++GRRVH+I +DLT  +R++ E+LQPG  LKL+ELGLE DCV DIDAQ+V GY + K GK+ +L YPL+  +S+V G+SFHNG +VQR REKA+ LP
Subjt:  QDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPLNS-NSNVTGKSFHNGLYVQRPREKAASLP

Q9SM02 Squalene epoxidase 17.2e-2657.43Show/hide
Query:  QDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPLNS-NSNVTGKSFHNGLYVQRPREKAASLPKYY
        +D RRVH+I +DL+  +R++ E+LQPG  LKLLELG+E DCV +IDAQ+V+GY + K+GK +RL YPL   + +V+G+SFHNG ++QR REKAASLP   
Subjt:  QDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPLNS-NSNVTGKSFHNGLYVQRPREKAASLPKYY

Query:  L
        L
Subjt:  L

Arabidopsis top hitse value%identityAlignment
AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein5.1e-2757.43Show/hide
Query:  QDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPLNS-NSNVTGKSFHNGLYVQRPREKAASLPKYY
        +D RRVH+I +DL+  +R++ E+LQPG  LKLLELG+E DCV +IDAQ+V+GY + K+GK +RL YPL   + +V+G+SFHNG ++QR REKAASLP   
Subjt:  QDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPLNS-NSNVTGKSFHNGLYVQRPREKAASLPKYY

Query:  L
        L
Subjt:  L

AT2G22830.1 squalene epoxidase 22.1e-2557.29Show/hide
Query:  QDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPLNS-NSNVTGKSFHNGLYVQRPREKAASL
        ++GRRVH+I +D +  +R++ E+LQPG  LKL+ELGLE DCV  IDAQ+V GYV+ K GK+ +L YPL + +S+V G+SFHNG +VQR REKA +L
Subjt:  QDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPLNS-NSNVTGKSFHNGLYVQRPREKAASL

AT4G37760.1 squalene epoxidase 33.9e-2759.79Show/hide
Query:  QDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPLNS-NSNVTGKSFHNGLYVQRPREKAASLP
        ++GRRVH+I +DLT  +R++ E+LQPG  LKL+ELGLE DCV DIDAQ+V GY + K GK+ +L YPL+  +S+V G+SFHNG +VQR REKA+ LP
Subjt:  QDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPLNS-NSNVTGKSFHNGLYVQRPREKAASLP

AT5G24150.1 FAD/NAD(P)-binding oxidoreductase family protein1.0e-1944.95Show/hide
Query:  ITYHGLQDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPLNSNS---NVTGKSFHNGLYVQRPREK
        + Y   +DGRRVH+I +DL    R++ E +QPG RL L +LGLE DC+  IDAQ+  G  ++K GK     +P+++N+   + + +SFHNG +VQR R+K
Subjt:  ITYHGLQDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPLNSNS---NVTGKSFHNGLYVQRPREK

Query:  AASLPKYYL
        A+SLP   L
Subjt:  AASLPKYYL

AT5G24150.2 FAD/NAD(P)-binding oxidoreductase family protein1.0e-1944.95Show/hide
Query:  ITYHGLQDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPLNSNS---NVTGKSFHNGLYVQRPREK
        + Y   +DGRRVH+I +DL    R++ E +QPG RL L +LGLE DC+  IDAQ+  G  ++K GK     +P+++N+   + + +SFHNG +VQR R+K
Subjt:  ITYHGLQDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPLNSNS---NVTGKSFHNGLYVQRPREK

Query:  AASLPKYYL
        A+SLP   L
Subjt:  AASLPKYYL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTACATATCATGGCTTGCAGGATGGGCGTCGTGTGCATATTATCGGTCAAGATTTAACAACACACAATAGAATGATCAAGGAAGTGCTTCAGCCAGGAGACCGTCTGAA
ATTACTTGAGTTGGGACTCGAAGCAGATTGTGTGTTGGATATTGATGCTCAACAAGTTTTTGGATATGTCATACACAAGCATGGGAAATATGTTCGGCTGCCTTATCCCT
TAAACAGCAATTCAAATGTGACAGGAAAAAGCTTCCACAATGGCCTCTATGTACAAAGACCAAGAGAAAAGGCTGCATCTCTTCCCAAGTATTATCTC
mRNA sequenceShow/hide mRNA sequence
ATTACATATCATGGCTTGCAGGATGGGCGTCGTGTGCATATTATCGGTCAAGATTTAACAACACACAATAGAATGATCAAGGAAGTGCTTCAGCCAGGAGACCGTCTGAA
ATTACTTGAGTTGGGACTCGAAGCAGATTGTGTGTTGGATATTGATGCTCAACAAGTTTTTGGATATGTCATACACAAGCATGGGAAATATGTTCGGCTGCCTTATCCCT
TAAACAGCAATTCAAATGTGACAGGAAAAAGCTTCCACAATGGCCTCTATGTACAAAGACCAAGAGAAAAGGCTGCATCTCTTCCCAAGTATTATCTC
Protein sequenceShow/hide protein sequence
ITYHGLQDGRRVHIIGQDLTTHNRMIKEVLQPGDRLKLLELGLEADCVLDIDAQQVFGYVIHKHGKYVRLPYPLNSNSNVTGKSFHNGLYVQRPREKAASLPKYYL