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MS012384 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012384
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein SOB FIVE-LIKE 6-like isoform X1
Genome locationscaffold63:332409..333180
RNA-Seq ExpressionMS012384
SyntenyMS012384
Gene Ontology termsGO:0009691 - cytokinin biosynthetic process (biological process)
GO:0009736 - cytokinin-activated signaling pathway (biological process)
InterPro domainsIPR044670 - SOB-five-Like (SOFL) family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600277.1 hypothetical protein SDJN03_05510, partial [Cucurbita argyrosperma subsp. sororia]3.6e-7582.68Show/hide
Query:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRMVGGEGGFCDGYWKAKASEEEEEEVEDLSMVSDASSGPPHFIEDDACSHEEDGHFSRASKSATLGKRK
        MDLLGSECSSGCESGWTLYLEQSFLSHGGSDR+VG   GFCDGYWKA+A+EE E E EDLSMVSDASSGPPHF ED+ACSHE+DGHFS ASKS T  K K
Subjt:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRMVGGEGGFCDGYWKAKASEEEEEEVEDLSMVSDASSGPPHFIEDDACSHEEDGHFSRASKSATLGKRK

Query:  GKKQKIKEYQFHEPSSSFLDDTASSPALNFTPNNFTNQASMESFMDFSQTSHFEERSAFTDHFGFLQSSLSGNRMQKNQ
        GKKQKI EYQ H+  SSFLDDTASSPA NFT NNFTNQ SMESF+  SQTSHFEERS+FT+HFGFLQSSLSGNR+QKNQ
Subjt:  GKKQKIKEYQFHEPSSSFLDDTASSPALNFTPNNFTNQASMESFMDFSQTSHFEERSAFTDHFGFLQSSLSGNRMQKNQ

KAG7030936.1 hypothetical protein SDJN02_04973, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-7582.78Show/hide
Query:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRMVGGEGGFCDGYWKAKASEEEEEEVEDLSMVSDASSGPPHFIEDDACSHEEDGHFSRASKSATLGKRK
        MDLLGSECSSGCESGWTLYLEQSFLSHGGSDR+VG   GFCDGYWKA+A+EE E E EDLSMVSDASSGPPHF ED+ACSHE+DGHFS ASKS T  K K
Subjt:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRMVGGEGGFCDGYWKAKASEEEEEEVEDLSMVSDASSGPPHFIEDDACSHEEDGHFSRASKSATLGKRK

Query:  GKKQKIKEYQFHEPSSSFLDDTASSPALNFTPNNFTNQASMESFMDFSQTSHFEERSAFTDHFGFLQSSLSGNRMQKNQL
        GKKQKI EYQ H+  SSFLDDTASSPA NFT NNFTNQ SMESF+  SQTSHFEERS+FT+HFGFLQSSLSGNR+QKNQL
Subjt:  GKKQKIKEYQFHEPSSSFLDDTASSPALNFTPNNFTNQASMESFMDFSQTSHFEERSAFTDHFGFLQSSLSGNRMQKNQL

XP_004150275.1 uncharacterized protein LOC101222672 [Cucumis sativus]2.3e-7480.98Show/hide
Query:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRMVGGEGGFC-DGYWKAKASEEEEEE----VEDLSMVSDASSGPPHFIEDDACSHEEDGHFSRASKSAT
        MDLLGSECSSGCESGWTLYLEQSFLS+G S  +V  EGGFC +GYWK K +EEE+EE    VEDLSMVSDASSGPPHFIED+ACSHE+D HFS  SKSAT
Subjt:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRMVGGEGGFC-DGYWKAKASEEEEEE----VEDLSMVSDASSGPPHFIEDDACSHEEDGHFSRASKSAT

Query:  LGKRKGKKQKIKEYQFHEPSSSFLDDTASSPALNFTPNNFTNQASMESFMDFSQTSHFEERSAFTDHFGFLQSSLSGNRMQKNQ
        LGKRKGKKQ+IKEYQ  +  SSFLDDTASSPALNFT NNFTNQASMESF+  SQT+HFEERSAFT+HFGFLQSSLSGNR+QKNQ
Subjt:  LGKRKGKKQKIKEYQFHEPSSSFLDDTASSPALNFTPNNFTNQASMESFMDFSQTSHFEERSAFTDHFGFLQSSLSGNRMQKNQ

XP_022149141.1 uncharacterized protein LOC111017634 [Momordica charantia]7.8e-9498.89Show/hide
Query:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRMVGGEGGFCDGYWKAKAS-EEEEEEVEDLSMVSDASSGPPHFIEDDACSHEEDGHFSRASKSATLGKR
        MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRMVGGEGGFCDGYWKAKAS EEEEEEVEDLSMVSDASSGPPHFIEDDACSHEEDGHFSRASKSATLGKR
Subjt:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRMVGGEGGFCDGYWKAKAS-EEEEEEVEDLSMVSDASSGPPHFIEDDACSHEEDGHFSRASKSATLGKR

Query:  KGKKQKIKEYQFHEPSSSFLDDTASSPALNFTPNNFTNQASMESFMDFSQTSHFEERSAFTDHFGFLQSSLSGNRMQKNQ
        KGKKQKIKEYQFHEPSSSFLDDTASSPALNFTPNNFTNQASM+SFMDFSQTSHFEERSAFTDHFGFLQSSLSGNRMQKNQ
Subjt:  KGKKQKIKEYQFHEPSSSFLDDTASSPALNFTPNNFTNQASMESFMDFSQTSHFEERSAFTDHFGFLQSSLSGNRMQKNQ

XP_023530436.1 uncharacterized protein LOC111792982 [Cucurbita pepo subsp. pepo]2.8e-7582.12Show/hide
Query:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRMVGGEGGFCDGYWKAKASEEEEEEVEDLSMVSDASSGPPHFIEDDACSHEEDGHFSRASKSATLGKRK
        MDLLGSECS GCESGWTLYLEQSFLSHGGSDR+VG E GFCDGYW+A+A+EE E E EDLSMVSDASSGPPHF ED+ACSHE+DGHFS ASKS T  K K
Subjt:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRMVGGEGGFCDGYWKAKASEEEEEEVEDLSMVSDASSGPPHFIEDDACSHEEDGHFSRASKSATLGKRK

Query:  GKKQKIKEYQFHEPSSSFLDDTASSPALNFTPNNFTNQASMESFMDFSQTSHFEERSAFTDHFGFLQSSLSGNRMQKNQ
        GKKQKI EYQ H+  SSFLDDTASSPA NFT NNFTNQ SMESF+  SQTSHFEERS+FT+HFGFLQSSLSGNR+QKNQ
Subjt:  GKKQKIKEYQFHEPSSSFLDDTASSPALNFTPNNFTNQASMESFMDFSQTSHFEERSAFTDHFGFLQSSLSGNRMQKNQ

TrEMBL top hitse value%identityAlignment
A0A0A0KV02 Uncharacterized protein1.1e-7480.98Show/hide
Query:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRMVGGEGGFC-DGYWKAKASEEEEEE----VEDLSMVSDASSGPPHFIEDDACSHEEDGHFSRASKSAT
        MDLLGSECSSGCESGWTLYLEQSFLS+G S  +V  EGGFC +GYWK K +EEE+EE    VEDLSMVSDASSGPPHFIED+ACSHE+D HFS  SKSAT
Subjt:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRMVGGEGGFC-DGYWKAKASEEEEEE----VEDLSMVSDASSGPPHFIEDDACSHEEDGHFSRASKSAT

Query:  LGKRKGKKQKIKEYQFHEPSSSFLDDTASSPALNFTPNNFTNQASMESFMDFSQTSHFEERSAFTDHFGFLQSSLSGNRMQKNQ
        LGKRKGKKQ+IKEYQ  +  SSFLDDTASSPALNFT NNFTNQASMESF+  SQT+HFEERSAFT+HFGFLQSSLSGNR+QKNQ
Subjt:  LGKRKGKKQKIKEYQFHEPSSSFLDDTASSPALNFTPNNFTNQASMESFMDFSQTSHFEERSAFTDHFGFLQSSLSGNRMQKNQ

A0A1S3BZC0 uncharacterized protein LOC103494824 isoform X41.6e-7380.11Show/hide
Query:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRMVGGEGGFC-DGYWKAKAS----EEEEEEVEDLSMVSDASSGPPHFIEDDACSHEEDGHFSRASKSAT
        MDLLGSE SSGCESGWTLYLEQSFLS+G S  +V  EGGFC +GYWK + +    EEEEE VEDLSMVSDASSGPPHFIED+ACSHE+D HFS  SKSAT
Subjt:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRMVGGEGGFC-DGYWKAKAS----EEEEEEVEDLSMVSDASSGPPHFIEDDACSHEEDGHFSRASKSAT

Query:  LGKRKGKKQKIKEYQFHEPSSSFLDDTASSPALNFTPNNFTNQASMESFMDFSQTSHFEERSAFTDHFGFLQSSLSGNRMQKNQLS
        LGKRKGKKQ+IKEYQ  +  SSFLDDTASSPALNFT NNFTNQASMESF+  SQT+HFEERSAFT+HFGFLQSSLSGNR+QKNQLS
Subjt:  LGKRKGKKQKIKEYQFHEPSSSFLDDTASSPALNFTPNNFTNQASMESFMDFSQTSHFEERSAFTDHFGFLQSSLSGNRMQKNQLS

A0A6J1D7H0 uncharacterized protein LOC1110176343.8e-9498.89Show/hide
Query:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRMVGGEGGFCDGYWKAKAS-EEEEEEVEDLSMVSDASSGPPHFIEDDACSHEEDGHFSRASKSATLGKR
        MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRMVGGEGGFCDGYWKAKAS EEEEEEVEDLSMVSDASSGPPHFIEDDACSHEEDGHFSRASKSATLGKR
Subjt:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRMVGGEGGFCDGYWKAKAS-EEEEEEVEDLSMVSDASSGPPHFIEDDACSHEEDGHFSRASKSATLGKR

Query:  KGKKQKIKEYQFHEPSSSFLDDTASSPALNFTPNNFTNQASMESFMDFSQTSHFEERSAFTDHFGFLQSSLSGNRMQKNQ
        KGKKQKIKEYQFHEPSSSFLDDTASSPALNFTPNNFTNQASM+SFMDFSQTSHFEERSAFTDHFGFLQSSLSGNRMQKNQ
Subjt:  KGKKQKIKEYQFHEPSSSFLDDTASSPALNFTPNNFTNQASMESFMDFSQTSHFEERSAFTDHFGFLQSSLSGNRMQKNQ

A0A6J1FVB5 uncharacterized protein LOC1114471865.6e-7481.56Show/hide
Query:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRMVGGEGGFCDGYWKAKASEEEEEEVEDLSMVSDASSGPPHFIEDDACSHEEDGHFSRASKSATLGKRK
        MDLLGSE SSGCESGWTLYLEQSFLSHGGSDR+V  E GFCDGYWKA+A+EE E E +DLSMVSDASSGPPHF ED+ACSHE+DGHFS ASKS T  K K
Subjt:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRMVGGEGGFCDGYWKAKASEEEEEEVEDLSMVSDASSGPPHFIEDDACSHEEDGHFSRASKSATLGKRK

Query:  GKKQKIKEYQFHEPSSSFLDDTASSPALNFTPNNFTNQASMESFMDFSQTSHFEERSAFTDHFGFLQSSLSGNRMQKNQ
        GKKQKI EYQ H+  SSFLDDTASSPA NFT NNFTNQ SMESF+  SQTSHFEERS+FT+HFGFLQSSLSGNR+QKNQ
Subjt:  GKKQKIKEYQFHEPSSSFLDDTASSPALNFTPNNFTNQASMESFMDFSQTSHFEERSAFTDHFGFLQSSLSGNRMQKNQ

A0A6J1K068 uncharacterized protein LOC1114894435.6e-7481.56Show/hide
Query:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRMVGGEGGFCDGYWKAKASEEEEEEVEDLSMVSDASSGPPHFIEDDACSHEEDGHFSRASKSATLGKRK
        MDLL SECSSGCESGWTLYLEQSFLSHGGSDR+V  E GFCDGYWKA+A+EE E E EDLSMVSDASSGPPHF ED+ACSHE+DGHFS ASKS T  K K
Subjt:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRMVGGEGGFCDGYWKAKASEEEEEEVEDLSMVSDASSGPPHFIEDDACSHEEDGHFSRASKSATLGKRK

Query:  GKKQKIKEYQFHEPSSSFLDDTASSPALNFTPNNFTNQASMESFMDFSQTSHFEERSAFTDHFGFLQSSLSGNRMQKNQ
        GKKQKI EYQ H+  SSFLDDTASSPA NFT NNF NQ SMESF+  SQTSHFEERS+FT+HFGFLQSSLSGNR+QKNQ
Subjt:  GKKQKIKEYQFHEPSSSFLDDTASSPALNFTPNNFTNQASMESFMDFSQTSHFEERSAFTDHFGFLQSSLSGNRMQKNQ

SwissProt top hitse value%identityAlignment
B6IDH8 Protein SOB FIVE-LIKE 62.8e-0629.55Show/hide
Query:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRMVGGEGGFCDGYWKAKASEEEEEEVEDLSMVSDASSGPPHFIEDDACSHEEDGHFSRASKSATLGKRK
        MD    + S   +SGWT+Y     L H  S  +          ++     E ++E  ED SMVSDASSGPP++ E+         +     KS +  K K
Subjt:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRMVGGEGGFCDGYWKAKASEEEEEEVEDLSMVSDASSGPPHFIEDDACSHEEDGHFSRASKSATLGKRK

Query:  GKKQKIKEYQFHEPSSSFLDDTASS-PALNFTPNNFTNQASMESFMDFSQTSHFEERSAFTDHFGFLQSSLSGNRM
         KK+  +E  + E  +S  DDTASS P       +  +Q   + F DF Q+           + GFLQ +   +++
Subjt:  GKKQKIKEYQFHEPSSSFLDDTASS-PALNFTPNNFTNQASMESFMDFSQTSHFEERSAFTDHFGFLQSSLSGNRM

Q8L9K4 Protein SOB FIVE-LIKE 55.7e-1537.36Show/hide
Query:  LLGSECSSGCESGWTLYLEQS--------FLSHGGSDRMVGGEGGFCDGYWKAKASEEEEEEVEDLSMVSDASSGPPHFIEDDACSHEEDGHFSRASKSA
        +LGS  SSGCESGWTLYL+QS        F    G D     +  +   Y      +EEEEE +DLSM+SDASSGP +  E+D+             K  
Subjt:  LLGSECSSGCESGWTLYLEQS--------FLSHGGSDRMVGGEGGFCDGYWKAKASEEEEEEVEDLSMVSDASSGPPHFIEDDACSHEEDGHFSRASKSA

Query:  TLGKRKGKKQKIKEYQFHEPSSSFLDDTASSPALNF-------TPNNFTNQASMESFMDFSQ---TSHFEERSAFTDHFGFL
         +G +K  K++ K+ + +E  +S LDDTASSP  NF          N   Q   ES +D+SQ    + F++++AF +  G+L
Subjt:  TLGKRKGKKQKIKEYQFHEPSSSFLDDTASSPALNF-------TPNNFTNQASMESFMDFSQ---TSHFEERSAFTDHFGFL

Arabidopsis top hitse value%identityAlignment
AT1G58460.1 unknown protein2.0e-0729.55Show/hide
Query:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRMVGGEGGFCDGYWKAKASEEEEEEVEDLSMVSDASSGPPHFIEDDACSHEEDGHFSRASKSATLGKRK
        MD    + S   +SGWT+Y     L H  S  +          ++     E ++E  ED SMVSDASSGPP++ E+         +     KS +  K K
Subjt:  MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRMVGGEGGFCDGYWKAKASEEEEEEVEDLSMVSDASSGPPHFIEDDACSHEEDGHFSRASKSATLGKRK

Query:  GKKQKIKEYQFHEPSSSFLDDTASS-PALNFTPNNFTNQASMESFMDFSQTSHFEERSAFTDHFGFLQSSLSGNRM
         KK+  +E  + E  +S  DDTASS P       +  +Q   + F DF Q+           + GFLQ +   +++
Subjt:  GKKQKIKEYQFHEPSSSFLDDTASS-PALNFTPNNFTNQASMESFMDFSQTSHFEERSAFTDHFGFLQSSLSGNRM

AT4G33800.1 unknown protein4.1e-1637.36Show/hide
Query:  LLGSECSSGCESGWTLYLEQS--------FLSHGGSDRMVGGEGGFCDGYWKAKASEEEEEEVEDLSMVSDASSGPPHFIEDDACSHEEDGHFSRASKSA
        +LGS  SSGCESGWTLYL+QS        F    G D     +  +   Y      +EEEEE +DLSM+SDASSGP +  E+D+             K  
Subjt:  LLGSECSSGCESGWTLYLEQS--------FLSHGGSDRMVGGEGGFCDGYWKAKASEEEEEEVEDLSMVSDASSGPPHFIEDDACSHEEDGHFSRASKSA

Query:  TLGKRKGKKQKIKEYQFHEPSSSFLDDTASSPALNF-------TPNNFTNQASMESFMDFSQ---TSHFEERSAFTDHFGFL
         +G +K  K++ K+ + +E  +S LDDTASSP  NF          N   Q   ES +D+SQ    + F++++AF +  G+L
Subjt:  TLGKRKGKKQKIKEYQFHEPSSSFLDDTASSPALNF-------TPNNFTNQASMESFMDFSQ---TSHFEERSAFTDHFGFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTGTTGGGTTCTGAGTGTAGTAGTGGGTGTGAGTCTGGTTGGACTCTGTATTTGGAGCAGTCTTTTCTTTCACATGGCGGTTCTGATCGCATGGTTGGGGGAGA
GGGTGGTTTCTGTGATGGATATTGGAAGGCTAAAGCTAGTGAAGAAGAAGAAGAGGAGGTTGAGGACCTTTCTATGGTTTCTGATGCTTCTTCTGGGCCTCCACATTTCA
TAGAAGACGACGCTTGCTCCCATGAAGAAGATGGCCATTTTTCTCGTGCTTCTAAGTCTGCCACATTGGGGAAGAGGAAGGGGAAGAAGCAGAAGATTAAAGAATATCAG
TTCCATGAGCCTTCTTCTTCCTTCCTAGATGACACTGCTAGTTCTCCTGCTCTCAACTTCACTCCTAATAATTTCACCAATCAAGCCTCAATGGAAAGCTTCATGGACTT
CTCTCAAACTAGTCATTTTGAGGAAAGATCAGCATTTACAGACCACTTTGGTTTCCTCCAATCTTCTCTATCAGGAAACAGAATGCAAAAGAACCAGTTAAGT
mRNA sequenceShow/hide mRNA sequence
ATGGATTTGTTGGGTTCTGAGTGTAGTAGTGGGTGTGAGTCTGGTTGGACTCTGTATTTGGAGCAGTCTTTTCTTTCACATGGCGGTTCTGATCGCATGGTTGGGGGAGA
GGGTGGTTTCTGTGATGGATATTGGAAGGCTAAAGCTAGTGAAGAAGAAGAAGAGGAGGTTGAGGACCTTTCTATGGTTTCTGATGCTTCTTCTGGGCCTCCACATTTCA
TAGAAGACGACGCTTGCTCCCATGAAGAAGATGGCCATTTTTCTCGTGCTTCTAAGTCTGCCACATTGGGGAAGAGGAAGGGGAAGAAGCAGAAGATTAAAGAATATCAG
TTCCATGAGCCTTCTTCTTCCTTCCTAGATGACACTGCTAGTTCTCCTGCTCTCAACTTCACTCCTAATAATTTCACCAATCAAGCCTCAATGGAAAGCTTCATGGACTT
CTCTCAAACTAGTCATTTTGAGGAAAGATCAGCATTTACAGACCACTTTGGTTTCCTCCAATCTTCTCTATCAGGAAACAGAATGCAAAAGAACCAGTTAAGT
Protein sequenceShow/hide protein sequence
MDLLGSECSSGCESGWTLYLEQSFLSHGGSDRMVGGEGGFCDGYWKAKASEEEEEEVEDLSMVSDASSGPPHFIEDDACSHEEDGHFSRASKSATLGKRKGKKQKIKEYQ
FHEPSSSFLDDTASSPALNFTPNNFTNQASMESFMDFSQTSHFEERSAFTDHFGFLQSSLSGNRMQKNQLS