; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS012387 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012387
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncysteine-rich and transmembrane domain-containing protein WIH2-like
Genome locationscaffold63:372285..372952
RNA-Seq ExpressionMS012387
SyntenyMS012387
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576909.1 Cysteine-rich and transmembrane domain-containing protein WIH2, partial [Cucurbita argyrosperma subsp. sororia]4.9e-3986.14Show/hide
Query:  MSYYNQGQPPIGVPPPQGYPPEGYPKDA-----YPPQGYPPAGYPPQGYPPPGAYPQQGYPPPYAPQYGQ-PPPQQQSSGPGCLEGCLAALCCCCLLDAC
        MSYYNQGQ P+GVPPP GYPPEGYPKDA     YPPQGYPP GYPPQGYPPPGAYP QGYPPPYAPQYGQ PPPQQQSS  GCL+GCLAALCCCCLLDAC
Subjt:  MSYYNQGQPPIGVPPPQGYPPEGYPKDA-----YPPQGYPPAGYPPQGYPPPGAYPQQGYPPPYAPQYGQ-PPPQQQSSGPGCLEGCLAALCCCCLLDAC

Query:  F
        F
Subjt:  F

XP_008454408.1 PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo]2.6e-4091.58Show/hide
Query:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPQGYPPAGYPPQGYPPPGAYPQQGYPPPYAPQYGQPPPQQQSSGPGCLEGCLAALCCCCLLDACF
        MSYYNQGQPPIGVPPPQGYPPEGYPKDA     YPP GYPPQGYPPPGAYP QGYPPPYAPQY QPPPQQQSSGPGCLEGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPQGYPPAGYPPQGYPPPGAYPQQGYPPPYAPQYGQPPPQQQSSGPGCLEGCLAALCCCCLLDACF

XP_022149329.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Momordica charantia]3.7e-47100Show/hide
Query:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPQGYPPAGYPPQGYPPPGAYPQQGYPPPYAPQYGQPPPQQQSSGPGCLEGCLAALCCCCLLDACF
        MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPQGYPPAGYPPQGYPPPGAYPQQGYPPPYAPQYGQPPPQQQSSGPGCLEGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPQGYPPAGYPPQGYPPPGAYPQQGYPPPYAPQYGQPPPQQQSSGPGCLEGCLAALCCCCLLDACF

XP_022985146.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita maxima]1.3e-3987.13Show/hide
Query:  MSYYNQGQPPIGVPPPQGYPPEGYPKDA-----YPPQGYPPAGYPPQGYPPPGAYPQQGYPPPYAPQYGQ-PPPQQQSSGPGCLEGCLAALCCCCLLDAC
        MSYYNQGQ P+GVPPPQGYPPEGYPKDA     YPPQGYPP GYPPQGYPPPGAYP QGYPPPYAPQYGQ PPPQQQSS  GCL+GCLAALCCCCLLDAC
Subjt:  MSYYNQGQPPIGVPPPQGYPPEGYPKDA-----YPPQGYPPAGYPPQGYPPPGAYPQQGYPPPYAPQYGQ-PPPQQQSSGPGCLEGCLAALCCCCLLDAC

Query:  F
        F
Subjt:  F

XP_023551906.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita pepo subsp. pepo]9.8e-4088.12Show/hide
Query:  MSYYNQGQPPIGVPPPQGYPPEGYPKDA-----YPPQGYPPAGYPPQGYPPPGAYPQQGYPPPYAPQYGQ-PPPQQQSSGPGCLEGCLAALCCCCLLDAC
        MSYYNQGQ PIGVPPPQGYPPEGYPKDA     YPPQGYPP GYPPQGYPPPGAYP QGYPPPYAPQYGQ PPPQQQSS  GCL+GCLAALCCCCLLDAC
Subjt:  MSYYNQGQPPIGVPPPQGYPPEGYPKDA-----YPPQGYPPAGYPPQGYPPPGAYPQQGYPPPYAPQYGQ-PPPQQQSSGPGCLEGCLAALCCCCLLDAC

Query:  F
        F
Subjt:  F

TrEMBL top hitse value%identityAlignment
A0A0A0KWC5 Uncharacterized protein3.1e-3990.62Show/hide
Query:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPQGYPPAGYPPQGYPPPGAYPQQGYPPPYAPQYGQPPPQQQ-SSGPGCLEGCLAALCCCCLLDACF
        MSYYNQGQPPIGVPPPQGYPPEGYPKDA     YPP GYPPQGYPPPGAYP QGYPPPYAPQY QPPPQQQ SSGPGCLEGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPQGYPPAGYPPQGYPPPGAYPQQGYPPPYAPQYGQPPPQQQ-SSGPGCLEGCLAALCCCCLLDACF

A0A1S3BZB4 cysteine-rich and transmembrane domain-containing protein A-like1.3e-4091.58Show/hide
Query:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPQGYPPAGYPPQGYPPPGAYPQQGYPPPYAPQYGQPPPQQQSSGPGCLEGCLAALCCCCLLDACF
        MSYYNQGQPPIGVPPPQGYPPEGYPKDA     YPP GYPPQGYPPPGAYP QGYPPPYAPQY QPPPQQQSSGPGCLEGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPQGYPPAGYPPQGYPPPGAYPQQGYPPPYAPQYGQPPPQQQSSGPGCLEGCLAALCCCCLLDACF

A0A6J1D5E9 cysteine-rich and transmembrane domain-containing protein WIH2-like1.8e-47100Show/hide
Query:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPQGYPPAGYPPQGYPPPGAYPQQGYPPPYAPQYGQPPPQQQSSGPGCLEGCLAALCCCCLLDACF
        MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPQGYPPAGYPPQGYPPPGAYPQQGYPPPYAPQYGQPPPQQQSSGPGCLEGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPQGYPPAGYPPQGYPPPGAYPQQGYPPPYAPQYGQPPPQQQSSGPGCLEGCLAALCCCCLLDACF

A0A6J1E456 cysteine-rich and transmembrane domain-containing protein WIH2-like2.4e-3986.14Show/hide
Query:  MSYYNQGQPPIGVPPPQGYPPEGYPKDA-----YPPQGYPPAGYPPQGYPPPGAYPQQGYPPPYAPQYGQ-PPPQQQSSGPGCLEGCLAALCCCCLLDAC
        MSYYNQGQ P+GVPPP GYPPEGYPKDA     YPPQGYPP GYPPQGYPPPGAYP QGYPPPYAPQYGQ PPPQQQSS  GCL+GCLAALCCCCLLDAC
Subjt:  MSYYNQGQPPIGVPPPQGYPPEGYPKDA-----YPPQGYPPAGYPPQGYPPPGAYPQQGYPPPYAPQYGQ-PPPQQQSSGPGCLEGCLAALCCCCLLDAC

Query:  F
        F
Subjt:  F

A0A6J1J7A9 cysteine-rich and transmembrane domain-containing protein WIH2-like6.2e-4087.13Show/hide
Query:  MSYYNQGQPPIGVPPPQGYPPEGYPKDA-----YPPQGYPPAGYPPQGYPPPGAYPQQGYPPPYAPQYGQ-PPPQQQSSGPGCLEGCLAALCCCCLLDAC
        MSYYNQGQ P+GVPPPQGYPPEGYPKDA     YPPQGYPP GYPPQGYPPPGAYP QGYPPPYAPQYGQ PPPQQQSS  GCL+GCLAALCCCCLLDAC
Subjt:  MSYYNQGQPPIGVPPPQGYPPEGYPKDA-----YPPQGYPPAGYPPQGYPPPGAYPQQGYPPPYAPQYGQ-PPPQQQSSGPGCLEGCLAALCCCCLLDAC

Query:  F
        F
Subjt:  F

SwissProt top hitse value%identityAlignment
A5PLE2 Cysteine-rich and transmembrane domain-containing protein 13.8e-1046.96Show/hide
Query:  NQGQPP--IGVPPPQGYPPEGYPKDAYPPQGYPPAGYPPQGYPPPGAYPQQGY-------PPPYAPQ-----YGQPPP-------------QQQSSGPGC
        N  QPP   G  P  GYP +GYP   YP QGYP  GYPPQGYP  G YP QGY       P PY  Q     Y QP P               QS    C
Subjt:  NQGQPP--IGVPPPQGYPPEGYPKDAYPPQGYPPAGYPPQGYPPPGAYPQQGY-------PPPYAPQ-----YGQPPP-------------QQQSSGPGC

Query:  LEGCLAALCCCCLLD
        L  C AALCCCCL D
Subjt:  LEGCLAALCCCCLLD

P09241 Rhodopsin5.5e-0967.74Show/hide
Query:  QPPIGVPPPQGYPPEGY-PKDAY-PPQGYPPAGYPPQGYPPPGAYPQQGYPPPYAPQYGQPP
        QPP   PPPQGYPP+GY P+ AY PPQGYPP GYPPQGYPP G YP QG PP      G PP
Subjt:  QPPIGVPPPQGYPPEGY-PKDAY-PPQGYPPAGYPPQGYPPPGAYPQQGYPPPYAPQYGQPP

Q8LCL8 Cysteine-rich and transmembrane domain-containing protein B7.6e-1961.39Show/hide
Query:  NQGQPPIGVPPPQGYPPEGYPKDAYPP-------QGY-PPAGYPPQGYPPPGAYPQQGYPPPYAPQYGQPPPQQQSS--GPGCLEGCLAALCCCCLLDAC
        +Q  P +GVPP   YP EG PKDAYPP       QGY PP GYP QGYPP G YP QGYP    PQ G PP QQQ     PG LEGC+AALCC C+LDAC
Subjt:  NQGQPPIGVPPPQGYPPEGYPKDAYPP-------QGY-PPAGYPPQGYPPPGAYPQQGYPPPYAPQYGQPPPQQQSS--GPGCLEGCLAALCCCCLLDAC

Query:  F
        F
Subjt:  F

Q8S8M0 Cysteine-rich and transmembrane domain-containing protein WIH22.6e-3581Show/hide
Query:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPQGYPPAGYPPQGYPPPG----AYPQQGYPPPYAPQYGQPPP-QQQSSGPGCLEGCLAALCCCCLLDACF
        MS YN  QPP+GVPPPQGYPPEGYPKDAYPPQGYPP GYP QGYPP G     YPQQGYPPPYAPQY  PP  QQQ S PG LEGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPQGYPPAGYPPQGYPPPG----AYPQQGYPPPYAPQYGQPPP-QQQSSGPGCLEGCLAALCCCCLLDACF

Q9FJW3 Cysteine-rich and transmembrane domain-containing protein WIH15.6e-2267.39Show/hide
Query:  YNQGQPPIGVPPPQGYPPEGYPKDAYPPQGYPPAGYPPQGYPPPGAYPQQGYPPPYAPQYGQPPPQQQSSGPGCLEGCLAALCCCCLLDACF
        Y+Q Q P+G PPPQGYP    PKD YPP GYPPAGYPP GY     YP QGYPP   PQY Q P Q+Q++  G LEGCLAALCCCCLLDACF
Subjt:  YNQGQPPIGVPPPQGYPPEGYPKDAYPPQGYPPAGYPPQGYPPPGAYPQQGYPPPYAPQYGQPPPQQQSSGPGCLEGCLAALCCCCLLDACF

Arabidopsis top hitse value%identityAlignment
AT2G41420.1 proline-rich family protein1.9e-3681Show/hide
Query:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPQGYPPAGYPPQGYPPPG----AYPQQGYPPPYAPQYGQPPP-QQQSSGPGCLEGCLAALCCCCLLDACF
        MS YN  QPP+GVPPPQGYPPEGYPKDAYPPQGYPP GYP QGYPP G     YPQQGYPPPYAPQY  PP  QQQ S PG LEGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPQGYPPAGYPPQGYPPPG----AYPQQGYPPPYAPQYGQPPP-QQQSSGPGCLEGCLAALCCCCLLDACF

AT3G49845.1 unknown protein1.5e-1754.29Show/hide
Query:  QGQPPIGVPPPQGYPPEGYPKDAYPPQGYPP------AGYPPQGYPPPGAYPQQGYPPPY------APQYGQPPP---QQQSSGPGCLEGCLAALCCCCL
        +G PP G PPP GYPP  YP+  YPP GYPP       GYP QGYPPP  YP QG+PP Y       P YGQ PP   + +    G +EGCLA LCCC L
Subjt:  QGQPPIGVPPPQGYPPEGYPKDAYPPQGYPP------AGYPPQGYPPPGAYPQQGYPPPY------APQYGQPPP---QQQSSGPGCLEGCLAALCCCCL

Query:  LDACF
        L+ACF
Subjt:  LDACF

AT5G45350.1 proline-rich family protein1.5e-0956Show/hide
Query:  GQPPIGVPPPQGYPPEGYPKDAYPPQ--GYPPAGYPPQGYPP-PGAYPQQ----GYPPPYAPQYGQPPPQQQSSG
        G PP G PPP  YPP GYP+  YPP    YPPAGYPP  YPP PG YP      GYPP  AP YG  PP     G
Subjt:  GQPPIGVPPPQGYPPEGYPKDAYPPQ--GYPPAGYPPQGYPP-PGAYPQQ----GYPPPYAPQYGQPPPQQQSSG

AT5G45350.2 proline-rich family protein1.5e-0956Show/hide
Query:  GQPPIGVPPPQGYPPEGYPKDAYPPQ--GYPPAGYPPQGYPP-PGAYPQQ----GYPPPYAPQYGQPPPQQQSSG
        G PP G PPP  YPP GYP+  YPP    YPPAGYPP  YPP PG YP      GYPP  AP YG  PP     G
Subjt:  GQPPIGVPPPQGYPPEGYPKDAYPPQ--GYPPAGYPPQGYPP-PGAYPQQ----GYPPPYAPQYGQPPPQQQSSG

AT5G67600.1 unknown protein4.0e-2367.39Show/hide
Query:  YNQGQPPIGVPPPQGYPPEGYPKDAYPPQGYPPAGYPPQGYPPPGAYPQQGYPPPYAPQYGQPPPQQQSSGPGCLEGCLAALCCCCLLDACF
        Y+Q Q P+G PPPQGYP    PKD YPP GYPPAGYPP GY     YP QGYPP   PQY Q P Q+Q++  G LEGCLAALCCCCLLDACF
Subjt:  YNQGQPPIGVPPPQGYPPEGYPKDAYPPQGYPPAGYPPQGYPPPGAYPQQGYPPPYAPQYGQPPPQQQSSGPGCLEGCLAALCCCCLLDACF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTATTATAATCAGGGACAGCCTCCGATTGGAGTTCCTCCGCCTCAAGGTTATCCGCCGGAAGGTTATCCGAAGGATGCTTATCCGCCGCAAGGCTATCCGCCGGC
CGGATACCCGCCGCAGGGCTATCCTCCTCCCGGCGCGTACCCGCAGCAGGGATATCCTCCGCCTTACGCTCCTCAGTACGGCCAGCCTCCTCCTCAACAGCAAAGTAGCG
GCCCTGGTTGCTTGGAAGGCTGTTTGGCTGCGCTGTGCTGTTGCTGCTTGCTTGACGCCTGCTTC
mRNA sequenceShow/hide mRNA sequence
ATGAGTTATTATAATCAGGGACAGCCTCCGATTGGAGTTCCTCCGCCTCAAGGTTATCCGCCGGAAGGTTATCCGAAGGATGCTTATCCGCCGCAAGGCTATCCGCCGGC
CGGATACCCGCCGCAGGGCTATCCTCCTCCCGGCGCGTACCCGCAGCAGGGATATCCTCCGCCTTACGCTCCTCAGTACGGCCAGCCTCCTCCTCAACAGCAAAGTAGCG
GCCCTGGTTGCTTGGAAGGCTGTTTGGCTGCGCTGTGCTGTTGCTGCTTGCTTGACGCCTGCTTC
Protein sequenceShow/hide protein sequence
MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPQGYPPAGYPPQGYPPPGAYPQQGYPPPYAPQYGQPPPQQQSSGPGCLEGCLAALCCCCLLDACF