; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS012400 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012400
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDNA/RNA polymerases superfamily protein isoform 1
Genome locationscaffold63:415456..416572
RNA-Seq ExpressionMS012400
SyntenyMS012400
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014938.1 hypothetical protein SDJN02_22569, partial [Cucurbita argyrosperma subsp. argyrosperma]3.5e-9682.59Show/hide
Query:  MEFTQTISRIPQNFSPIPRFLSKIHASSSSSSKCPNSQLPAPSKSPKPLKS----REDNIPTMREILAAGAAQNLDLRLQTLGPFFRITAKSTESQREIG
        ME T  I  IPQNFSPI R L+K H +SSSSSK PN QLP PSKSPKP K+    R +  PTM EILAAG AQN+ LRLQTLGPFFRITAKS ESQREIG
Subjt:  MEFTQTISRIPQNFSPIPRFLSKIHASSSSSSKCPNSQLPAPSKSPKPLKS----REDNIPTMREILAAGAAQNLDLRLQTLGPFFRITAKSTESQREIG

Query:  KAEGLIRVWFGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKMGDFGDMLVW
        KAEGLIRVW  GRILHLDSIRL RESLGMEKSIFGLGLFIGAVAIRYG+DCGCKTAELLAINDSDLYHSKLVRFYTRIGFKS+YEVSGSK+GD GDMLVW
Subjt:  KAEGLIRVWFGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKMGDFGDMLVW

Query:  GGVGTRMDADIEELLLKWCTRFKS
        GGVGTRMDA IE LLLKWC+RFKS
Subjt:  GGVGTRMDADIEELLLKWCTRFKS

XP_022149148.1 uncharacterized protein LOC111017637 [Momordica charantia]4.1e-121100Show/hide
Query:  MEFTQTISRIPQNFSPIPRFLSKIHASSSSSSKCPNSQLPAPSKSPKPLKSREDNIPTMREILAAGAAQNLDLRLQTLGPFFRITAKSTESQREIGKAEG
        MEFTQTISRIPQNFSPIPRFLSKIHASSSSSSKCPNSQLPAPSKSPKPLKSREDNIPTMREILAAGAAQNLDLRLQTLGPFFRITAKSTESQREIGKAEG
Subjt:  MEFTQTISRIPQNFSPIPRFLSKIHASSSSSSKCPNSQLPAPSKSPKPLKSREDNIPTMREILAAGAAQNLDLRLQTLGPFFRITAKSTESQREIGKAEG

Query:  LIRVWFGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKMGDFGDMLVWGGVG
        LIRVWFGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKMGDFGDMLVWGGVG
Subjt:  LIRVWFGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKMGDFGDMLVWGGVG

Query:  TRMDADIEELLLKWCTRFKSP
        TRMDADIEELLLKWCTRFKSP
Subjt:  TRMDADIEELLLKWCTRFKSP

XP_022922749.1 uncharacterized protein LOC111430648 [Cucurbita moschata]5.9e-9682.14Show/hide
Query:  MEFTQTISRIPQNFSPIPRFLSKIHASSSSSSKCPNSQLPAPSKSPKPLKS----REDNIPTMREILAAGAAQNLDLRLQTLGPFFRITAKSTESQREIG
        ME T  I RIPQNF PI R L+K H +SSSSSK PN QLP PSKSPKP K+    R +  PTM EI+AAG AQN+ LRLQTLGPFFRITAKS ESQREIG
Subjt:  MEFTQTISRIPQNFSPIPRFLSKIHASSSSSSKCPNSQLPAPSKSPKPLKS----REDNIPTMREILAAGAAQNLDLRLQTLGPFFRITAKSTESQREIG

Query:  KAEGLIRVWFGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKMGDFGDMLVW
        KAEGLIRVW  GRILHLDSIRL RESLGMEKSIFGLGLFIGAVAIRYG+DCGCKTAELLAINDSDLYHSKLVRFYTRIGFKS+YEVSGSK+GD GDMLVW
Subjt:  KAEGLIRVWFGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKMGDFGDMLVW

Query:  GGVGTRMDADIEELLLKWCTRFKS
        GGVGTRMDA IE LLLKWC+RFKS
Subjt:  GGVGTRMDADIEELLLKWCTRFKS

XP_022984679.1 uncharacterized protein LOC111482888 [Cucurbita maxima]3.8e-9581.7Show/hide
Query:  MEFTQTISRIPQNFSPIPRFLSKIHASSSSSSKCPNSQLPAPSKSPKPLKS----REDNIPTMREILAAGAAQNLDLRLQTLGPFFRITAKSTESQREIG
        ME T  I RIPQNFSPI R L+K H SSSSSSK PN QLP PSK PKP K+    R +  PTM EILAAG AQN+ LRLQTLGPFFRITAKS ESQREIG
Subjt:  MEFTQTISRIPQNFSPIPRFLSKIHASSSSSSKCPNSQLPAPSKSPKPLKS----REDNIPTMREILAAGAAQNLDLRLQTLGPFFRITAKSTESQREIG

Query:  KAEGLIRVWFGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKMGDFGDMLVW
        KAEGLIRVW  GRILHLDSIRL RESLGMEKSIFGLGLFIGAVAIRYG+DCGCKTAELLAINDSDLYHSKLVRFYTRIGF+S+YEVSGS +GD GDMLVW
Subjt:  KAEGLIRVWFGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKMGDFGDMLVW

Query:  GGVGTRMDADIEELLLKWCTRFKS
        GGVGTRMDA IE LL KWC+RFKS
Subjt:  GGVGTRMDADIEELLLKWCTRFKS

XP_023521663.1 uncharacterized protein LOC111785501 [Cucurbita pepo subsp. pepo]1.7e-9582.14Show/hide
Query:  MEFTQTISRIPQNFSPIPRFLSKIHASSSSSSKCPNSQLPAPSKSPKPLKS----REDNIPTMREILAAGAAQNLDLRLQTLGPFFRITAKSTESQREIG
        ME T  I RIPQNFSPI R L+K H +SSSSSK PN QLP PSKS KP K+    R +  PTM EILAAG AQN+ LRLQTLGPFFRITAKS ESQREIG
Subjt:  MEFTQTISRIPQNFSPIPRFLSKIHASSSSSSKCPNSQLPAPSKSPKPLKS----REDNIPTMREILAAGAAQNLDLRLQTLGPFFRITAKSTESQREIG

Query:  KAEGLIRVWFGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKMGDFGDMLVW
        KAEGLIRVW  GRILHLDSIRL RESLGMEKSIFGLGLFIGAVAIRYG+DCGC+TAELLAINDSDLYHSKLVRFYTRIGFKS+YEVSGSK+GD GDMLVW
Subjt:  KAEGLIRVWFGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKMGDFGDMLVW

Query:  GGVGTRMDADIEELLLKWCTRFKS
        GGVGTRMDA IE LLLKWC+RFKS
Subjt:  GGVGTRMDADIEELLLKWCTRFKS

TrEMBL top hitse value%identityAlignment
A0A0A0KT41 Uncharacterized protein9.6e-9281.57Show/hide
Query:  FTQTISRIPQNFSPIPRFLSKIHASSSSSSKCPNSQLPAPSKSPKPLKSREDNIPTMREILAAGAAQNLDLRLQTLGPFFRITAKSTESQREIGKAEGLI
        FT TI RIP   SPI R L+KIHA  SSSSK PNSQLP PSK     +  E+NIPTM EI+AAG AQNL LRLQTLGPFFRITAKS  ++REIGKAEGL+
Subjt:  FTQTISRIPQNFSPIPRFLSKIHASSSSSSKCPNSQLPAPSKSPKPLKSREDNIPTMREILAAGAAQNLDLRLQTLGPFFRITAKSTESQREIGKAEGLI

Query:  RVWFGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKMGDFGDMLVWGGVGTR
        RVW GG+ILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYG+DCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSK+ D GDMLVWGG+GTR
Subjt:  RVWFGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKMGDFGDMLVWGGVGTR

Query:  MDADIEELLLKWCTRFK
        MDA I+ LLLKWCTRFK
Subjt:  MDADIEELLLKWCTRFK

A0A1S3BZR1 uncharacterized protein LOC1034948154.6e-9481.82Show/hide
Query:  FTQTISRIPQNFSPIPRFLSKIHASSSSSSKCPNSQLPAPSKSPKPLKSR-EDNIPTMREILAAGAAQNLDLRLQTLGPFFRITAKSTESQREIGKAEGL
        FT TI RIP   SPI R L+KIHA  SSSSK PNSQLP PSKS    + + E+NIPTM EI+AAG +QNL LRLQTLGPFFRITAKS E++REIGKAEGL
Subjt:  FTQTISRIPQNFSPIPRFLSKIHASSSSSSKCPNSQLPAPSKSPKPLKSR-EDNIPTMREILAAGAAQNLDLRLQTLGPFFRITAKSTESQREIGKAEGL

Query:  IRVWFGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKMGDFGDMLVWGGVGT
        +RVW GG+ILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYG+DCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSK+ D GDM+VWGG+GT
Subjt:  IRVWFGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKMGDFGDMLVWGGVGT

Query:  RMDADIEELLLKWCTRFKSP
        RMDA IE LLLKWCTRFKSP
Subjt:  RMDADIEELLLKWCTRFKSP

A0A6J1D616 uncharacterized protein LOC1110176372.0e-121100Show/hide
Query:  MEFTQTISRIPQNFSPIPRFLSKIHASSSSSSKCPNSQLPAPSKSPKPLKSREDNIPTMREILAAGAAQNLDLRLQTLGPFFRITAKSTESQREIGKAEG
        MEFTQTISRIPQNFSPIPRFLSKIHASSSSSSKCPNSQLPAPSKSPKPLKSREDNIPTMREILAAGAAQNLDLRLQTLGPFFRITAKSTESQREIGKAEG
Subjt:  MEFTQTISRIPQNFSPIPRFLSKIHASSSSSSKCPNSQLPAPSKSPKPLKSREDNIPTMREILAAGAAQNLDLRLQTLGPFFRITAKSTESQREIGKAEG

Query:  LIRVWFGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKMGDFGDMLVWGGVG
        LIRVWFGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKMGDFGDMLVWGGVG
Subjt:  LIRVWFGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKMGDFGDMLVWGGVG

Query:  TRMDADIEELLLKWCTRFKSP
        TRMDADIEELLLKWCTRFKSP
Subjt:  TRMDADIEELLLKWCTRFKSP

A0A6J1E4B2 uncharacterized protein LOC1114306482.9e-9682.14Show/hide
Query:  MEFTQTISRIPQNFSPIPRFLSKIHASSSSSSKCPNSQLPAPSKSPKPLKS----REDNIPTMREILAAGAAQNLDLRLQTLGPFFRITAKSTESQREIG
        ME T  I RIPQNF PI R L+K H +SSSSSK PN QLP PSKSPKP K+    R +  PTM EI+AAG AQN+ LRLQTLGPFFRITAKS ESQREIG
Subjt:  MEFTQTISRIPQNFSPIPRFLSKIHASSSSSSKCPNSQLPAPSKSPKPLKS----REDNIPTMREILAAGAAQNLDLRLQTLGPFFRITAKSTESQREIG

Query:  KAEGLIRVWFGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKMGDFGDMLVW
        KAEGLIRVW  GRILHLDSIRL RESLGMEKSIFGLGLFIGAVAIRYG+DCGCKTAELLAINDSDLYHSKLVRFYTRIGFKS+YEVSGSK+GD GDMLVW
Subjt:  KAEGLIRVWFGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKMGDFGDMLVW

Query:  GGVGTRMDADIEELLLKWCTRFKS
        GGVGTRMDA IE LLLKWC+RFKS
Subjt:  GGVGTRMDADIEELLLKWCTRFKS

A0A6J1JB84 uncharacterized protein LOC1114828881.9e-9581.7Show/hide
Query:  MEFTQTISRIPQNFSPIPRFLSKIHASSSSSSKCPNSQLPAPSKSPKPLKS----REDNIPTMREILAAGAAQNLDLRLQTLGPFFRITAKSTESQREIG
        ME T  I RIPQNFSPI R L+K H SSSSSSK PN QLP PSK PKP K+    R +  PTM EILAAG AQN+ LRLQTLGPFFRITAKS ESQREIG
Subjt:  MEFTQTISRIPQNFSPIPRFLSKIHASSSSSSKCPNSQLPAPSKSPKPLKS----REDNIPTMREILAAGAAQNLDLRLQTLGPFFRITAKSTESQREIG

Query:  KAEGLIRVWFGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKMGDFGDMLVW
        KAEGLIRVW  GRILHLDSIRL RESLGMEKSIFGLGLFIGAVAIRYG+DCGCKTAELLAINDSDLYHSKLVRFYTRIGF+S+YEVSGS +GD GDMLVW
Subjt:  KAEGLIRVWFGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKMGDFGDMLVW

Query:  GGVGTRMDADIEELLLKWCTRFKS
        GGVGTRMDA IE LL KWC+RFKS
Subjt:  GGVGTRMDADIEELLLKWCTRFKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTCACTCAAACAATTTCCCGAATCCCCCAAAATTTCTCGCCAATTCCAAGATTCCTTAGTAAAATCCACGCCTCCTCCTCTTCCTCATCCAAATGCCCTAATTC
CCAATTACCAGCCCCTTCAAAATCGCCAAAACCACTGAAATCCAGAGAAGATAACATACCGACGATGCGTGAGATTTTGGCGGCCGGCGCGGCCCAGAATCTGGACCTCC
GGCTCCAAACCTTGGGGCCGTTCTTCAGAATCACGGCGAAAAGCACGGAATCGCAGCGGGAAATCGGGAAGGCGGAGGGATTGATAAGAGTGTGGTTTGGAGGGAGGATT
CTGCATCTGGATTCGATCCGATTGAACAGAGAGAGCTTGGGAATGGAGAAATCGATCTTCGGACTCGGATTGTTCATCGGCGCTGTCGCGATCCGATATGGATTTGATTG
TGGATGCAAAACGGCTGAGTTGTTGGCGATCAACGACTCGGATCTTTATCATTCTAAGCTGGTTAGATTCTACACGAGGATTGGGTTCAAGAGTATGTATGAAGTGAGTG
GCTCAAAGATGGGAGATTTTGGGGACATGTTGGTGTGGGGAGGGGTTGGGACTAGAATGGATGCAGACATTGAAGAGCTTCTTCTTAAATGGTGCACTAGATTCAAATCC
CCC
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTCACTCAAACAATTTCCCGAATCCCCCAAAATTTCTCGCCAATTCCAAGATTCCTTAGTAAAATCCACGCCTCCTCCTCTTCCTCATCCAAATGCCCTAATTC
CCAATTACCAGCCCCTTCAAAATCGCCAAAACCACTGAAATCCAGAGAAGATAACATACCGACGATGCGTGAGATTTTGGCGGCCGGCGCGGCCCAGAATCTGGACCTCC
GGCTCCAAACCTTGGGGCCGTTCTTCAGAATCACGGCGAAAAGCACGGAATCGCAGCGGGAAATCGGGAAGGCGGAGGGATTGATAAGAGTGTGGTTTGGAGGGAGGATT
CTGCATCTGGATTCGATCCGATTGAACAGAGAGAGCTTGGGAATGGAGAAATCGATCTTCGGACTCGGATTGTTCATCGGCGCTGTCGCGATCCGATATGGATTTGATTG
TGGATGCAAAACGGCTGAGTTGTTGGCGATCAACGACTCGGATCTTTATCATTCTAAGCTGGTTAGATTCTACACGAGGATTGGGTTCAAGAGTATGTATGAAGTGAGTG
GCTCAAAGATGGGAGATTTTGGGGACATGTTGGTGTGGGGAGGGGTTGGGACTAGAATGGATGCAGACATTGAAGAGCTTCTTCTTAAATGGTGCACTAGATTCAAATCC
CCC
Protein sequenceShow/hide protein sequence
MEFTQTISRIPQNFSPIPRFLSKIHASSSSSSKCPNSQLPAPSKSPKPLKSREDNIPTMREILAAGAAQNLDLRLQTLGPFFRITAKSTESQREIGKAEGLIRVWFGGRI
LHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKMGDFGDMLVWGGVGTRMDADIEELLLKWCTRFKS
P