CuGenDBv2

Gene ID	MS012401
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	pre-mRNA-splicing factor CWC25-like isoform X2
Genome location	scaffold63:419669..421924
RNA-Seq Expression	MS012401
Synteny	MS012401
Gene Ontology terms	GO:0016070 - RNA metabolic process (biological process) GO:0005622 - intracellular (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6600285.1 hypothetical protein SDJN03_05518, partial [Cucurbita argyrosperma subsp. sororia]

2.8e-131

81.19

Show/hide

Query:  SPKRSRRDRKPLEEKLSRNSSSHIDDNKDRDQKHELRHRGQNLIPHESSLALDSKPEGGVVSKEANKNSDGGRDGGTKHSLNPTEVSRVRSYFQHEERGN
        SPKRSRRDRKPLEEKLSRNSSSH++DNKDRDQKHELRH GQ+  PHESSLALDS PEGG VSK AN+NSD  R+GGTK SLNPTE  R RSYFQH++RG+
Subjt:  SPKRSRRDRKPLEEKLSRNSSSHIDDNKDRDQKHELRHRGQNLIPHESSLALDSKPEGGVVSKEANKNSDGGRDGGTKHSLNPTEVSRVRSYFQHEERGN

Query:  AGQVGRSFGRSATSERGWWKDSKDED--NDRAPGKTATYNSQQRDEMPQ--REDNHTRHRDGSSKVEVDAPTPARKRPAFREKKIAVDSENVDKAAVASE
        AGQVGRSFGRS++S RGWWKDSK++D  +DRA GKTATYNSQ+RDE+PQ  +EDNHTR RDGSSK+EVD+  PARKRPAFREKKI  D+EN +KA +ASE
Subjt:  AGQVGRSFGRSATSERGWWKDSKDED--NDRAPGKTATYNSQQRDEMPQ--REDNHTRHRDGSSKVEVDAPTPARKRPAFREKKIAVDSENVDKAAVASE

Query:  TKKSSDPHHPEDGRERREERGRDTRYSEKLNKHVTGDMGAKRDEIKRGGYPVRERYGN-GGGGNYRGRDRFGGRQGYRAGAGGTRVEKWKHDLFHEANRS
        +KK SDPH P+DGRERREERGRDTRYS+KL+KHVTGDM +KRDE+KRGGY VRERYGN GGGGNYRGRDRFGGRQGY A +GGTRVEKWKHDLFHEANRS
Subjt:  TKKSSDPHHPEDGRERREERGRDTRYSEKLNKHVTGDMGAKRDEIKRGGYPVRERYGN-GGGGNYRGRDRFGGRQGYRAGAGGTRVEKWKHDLFHEANRS

Query:  PTPKNEEDQIAKVEALLAS
        PTPKNEEDQIAKVEALLAS
Subjt:  PTPKNEEDQIAKVEALLAS

XP_022942670.1 pre-mRNA-splicing factor CWC25-like isoform X1 [Cucurbita moschata]

9.6e-132

81.5

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Query:  SPKRSRRDRKPLEEKLSRNSSSHIDDNKDRDQKHELRHRGQNLIPHESSLALDSKPEGGVVSKEANKNSDGGRDGGTKHSLNPTEVSRVRSYFQHEERGN
        SPKRSRRDRKPLEEKLSRNSSSH++DNKDRDQKHELRH GQ+  PHESSLALDS PEGG VSK AN+NSD  R+GGTK SLNPTEV R RSYFQH++RG+
Subjt:  SPKRSRRDRKPLEEKLSRNSSSHIDDNKDRDQKHELRHRGQNLIPHESSLALDSKPEGGVVSKEANKNSDGGRDGGTKHSLNPTEVSRVRSYFQHEERGN

Query:  AGQVGRSFGRSATSERGWWKDSKDED--NDRAPGKTATYNSQQRDEMPQ--REDNHTRHRDGSSKVEVDAPTPARKRPAFREKKIAVDSENVDKAAVASE
        AGQVGRSFGRS++S RGWWKDSK++D  +DRA GKTATYNSQ+RDE+PQ  +EDNHTR RDGSSK+EVD+  PARKRPAFREKKI  D+EN +KA +ASE
Subjt:  AGQVGRSFGRSATSERGWWKDSKDED--NDRAPGKTATYNSQQRDEMPQ--REDNHTRHRDGSSKVEVDAPTPARKRPAFREKKIAVDSENVDKAAVASE

Query:  TKKSSDPHHPEDGRERREERGRDTRYSEKLNKHVTGDMGAKRDEIKRGGYPVRERYGN-GGGGNYRGRDRFGGRQGYRAGAGGTRVEKWKHDLFHEANRS
        +KK SDPH P+DGRERREERGRDTRYS+KL+KHVTGDM +KRDE+KRGGY VRERYGN GGGGNYRGRDRFGGRQGY A +GGTRVEKWKHDLFHEANRS
Subjt:  TKKSSDPHHPEDGRERREERGRDTRYSEKLNKHVTGDMGAKRDEIKRGGYPVRERYGN-GGGGNYRGRDRFGGRQGYRAGAGGTRVEKWKHDLFHEANRS

Query:  PTPKNEEDQIAKVEALLAS
        PTPKNEEDQIAKVEALLAS
Subjt:  PTPKNEEDQIAKVEALLAS

XP_022984546.1 pre-mRNA-splicing factor CWC25 isoform X1 [Cucurbita maxima]

2.4e-130

80.88

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Query:  SPKRSRRDRKPLEEKLSRNSSSHIDDNKDRDQKHELRHRGQNLIPHESSLALDSKPEGGVVSKEANKNSDGGRDGGTKHSLNPTEVSRVRSYFQHEERGN
        SPKRSRRDRKPLEEKLSRNSSSH++DNKDRDQKHELRH GQ++ PHESSLALDS PEGG VSK AN+NSD  R+GGTK +LNPTEV R RSYFQH++RG+
Subjt:  SPKRSRRDRKPLEEKLSRNSSSHIDDNKDRDQKHELRHRGQNLIPHESSLALDSKPEGGVVSKEANKNSDGGRDGGTKHSLNPTEVSRVRSYFQHEERGN

Query:  AGQVGRSFGRSATSERGWWKDSKDED--NDRAPGKTATYNSQQRDEMPQ--REDNHTRHRDGSSKVEVDAPTPARKRPAFREKKIAVDSENVDKAAVASE
        AGQVGRSFGRS++S RGWWKDSK++D  +DRA GKTATYNSQ+RDE+PQ  +EDNHTR RDGSSK+EVD+  PARKRPAFREKKI  D+EN +KA +ASE
Subjt:  AGQVGRSFGRSATSERGWWKDSKDED--NDRAPGKTATYNSQQRDEMPQ--REDNHTRHRDGSSKVEVDAPTPARKRPAFREKKIAVDSENVDKAAVASE

Query:  TKKSSDPHHPEDGRERREERGRDTRYSEKLNKHVTGDMGAKRDEIKRGGYPVRERYGN-GGGGNYRGRDRFGGRQGYRAGAGGTRVEKWKHDLFHEANRS
        +KK SDPH P+DGRERREERGRDTRYS+KL+KHVTGDM +KRDE+KRGGY VRERYGN GGGGNYRGRDRFGGRQGY A +GGTRVEKWKHDLFHEANRS
Subjt:  TKKSSDPHHPEDGRERREERGRDTRYSEKLNKHVTGDMGAKRDEIKRGGYPVRERYGN-GGGGNYRGRDRFGGRQGYRAGAGGTRVEKWKHDLFHEANRS

Query:  PTPKNEEDQIAKVEALLAS
        PTPKNEE QIAKVEALLAS
Subjt:  PTPKNEEDQIAKVEALLAS

XP_023521659.1 pre-mRNA-splicing factor CWC25-like [Cucurbita pepo subsp. pepo]

6.3e-131

81.19

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Query:  SPKRSRRDRKPLEEKLSRNSSSHIDDNKDRDQKHELRHRGQNLIPHESSLALDSKPEGGVVSKEANKNSDGGRDGGTKHSLNPTEVSRVRSYFQHEERGN
        SPKRSRRDRK LEEKLSRNSSSH++DNKDRDQKHELRH GQ++ PHESSLALDS PEGG VSK AN+NSD  R+GGTK SLNPTEV R RSYFQH++RG+
Subjt:  SPKRSRRDRKPLEEKLSRNSSSHIDDNKDRDQKHELRHRGQNLIPHESSLALDSKPEGGVVSKEANKNSDGGRDGGTKHSLNPTEVSRVRSYFQHEERGN

Query:  AGQVGRSFGRSATSERGWWKDSKDED--NDRAPGKTATYNSQQRDEMPQ--REDNHTRHRDGSSKVEVDAPTPARKRPAFREKKIAVDSENVDKAAVASE
        AGQVGRSFGRS++S RGWWKDSK++D  +DRA GKTATYNSQ+RDE+PQ  +EDNHTR RDGSSK+EVD+  PARKRPAFREKKI  D+EN +KA +ASE
Subjt:  AGQVGRSFGRSATSERGWWKDSKDED--NDRAPGKTATYNSQQRDEMPQ--REDNHTRHRDGSSKVEVDAPTPARKRPAFREKKIAVDSENVDKAAVASE

Query:  TKKSSDPHHPEDGRERREERGRDTRYSEKLNKHVTGDMGAKRDEIKRGGYPVRERYGN-GGGGNYRGRDRFGGRQGYRAGAGGTRVEKWKHDLFHEANRS
        +KK SDPH P+DGRERREERGRDTRYS+KL+KHVTGDM +KRDE+KRGGY VRERYGN GGGGNYRGRDRFGGRQGY A +GGTRVEKWKHDLFHEANRS
Subjt:  TKKSSDPHHPEDGRERREERGRDTRYSEKLNKHVTGDMGAKRDEIKRGGYPVRERYGN-GGGGNYRGRDRFGGRQGYRAGAGGTRVEKWKHDLFHEANRS

Query:  PTPKNEEDQIAKVEALLAS
        PTPKNEEDQIAKVEALLAS
Subjt:  PTPKNEEDQIAKVEALLAS

XP_023548006.1 pre-mRNA-splicing factor CWC25-like [Cucurbita pepo subsp. pepo]

7.4e-132

81.5

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Query:  SPKRSRRDRKPLEEKLSRNSSSHIDDNKDRDQKHELRHRGQNLIPHESSLALDSKPEGGVVSKEANKNSDGGRDGGTKHSLNPTEVSRVRSYFQHEERGN
        SPKRSRRDRKPLEEKLSRNSSSH++DNKDRDQKHELRH GQ++ PHESSLALDS PEGG VSK AN+NSD  R+GGTK SLNPTEV R RSYFQH++RG+
Subjt:  SPKRSRRDRKPLEEKLSRNSSSHIDDNKDRDQKHELRHRGQNLIPHESSLALDSKPEGGVVSKEANKNSDGGRDGGTKHSLNPTEVSRVRSYFQHEERGN

Query:  AGQVGRSFGRSATSERGWWKDSKDED--NDRAPGKTATYNSQQRDEMPQ--REDNHTRHRDGSSKVEVDAPTPARKRPAFREKKIAVDSENVDKAAVASE
        AGQVGRSFGRS++S RGWWKDSK++D  +DRA GKTATYNSQ+RDE+PQ  +EDNHTR RDGSSK+EVD+  PARKRPAFREKKI  D+EN +KA +ASE
Subjt:  AGQVGRSFGRSATSERGWWKDSKDED--NDRAPGKTATYNSQQRDEMPQ--REDNHTRHRDGSSKVEVDAPTPARKRPAFREKKIAVDSENVDKAAVASE

Query:  TKKSSDPHHPEDGRERREERGRDTRYSEKLNKHVTGDMGAKRDEIKRGGYPVRERYGN-GGGGNYRGRDRFGGRQGYRAGAGGTRVEKWKHDLFHEANRS
        +KK SDPH P+DGRERREERGRDTRYS+KL+KHVTGDM +KRDE+KRGGY VRERYGN GGGGNYRGRDRFGGRQGY A +GGTRVEKWKHDLFHEANRS
Subjt:  TKKSSDPHHPEDGRERREERGRDTRYSEKLNKHVTGDMGAKRDEIKRGGYPVRERYGN-GGGGNYRGRDRFGGRQGYRAGAGGTRVEKWKHDLFHEANRS

Query:  PTPKNEEDQIAKVEALLAS
        PTPKNEEDQIAKVEALLAS
Subjt:  PTPKNEEDQIAKVEALLAS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KV12 Uncharacterized protein

1.7e-121

78.44

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Query:  SPKRSRRDRKPLEEKLSRNSSSHIDDNKDRDQKHELRHRGQNLIPHESSLALDSKPEGGVVSKEANKNSDGGRDGGTKHSLNPTEVSRVRSYFQHEERGN
        SPKRS+RDRK LEEKLSRNSSSH++DNK+RDQKHELR  GQ++IPHESSLAL+SKPEGG     AN+NSD GRDGGTKHS+NPTEV R RSYFQH+ER N
Subjt:  SPKRSRRDRKPLEEKLSRNSSSHIDDNKDRDQKHELRHRGQNLIPHESSLALDSKPEGGVVSKEANKNSDGGRDGGTKHSLNPTEVSRVRSYFQHEERGN

Query:  AGQVGRSFGRSATSERGWWKDSK--DEDNDRAPGKTATYNSQQRDEMPQ--REDNHTRHRDGSSKVEVDAPTPARKRPAFREKKIAVDSENVDKAAVASE
        AGQVGRSFGRSATSERGWWKDSK  D+D+DRA GK+ TY SQQRDE PQ  RED   RH DGSSK+EVDA TPARKRPAFREKKI VD+E+ +K A+  E
Subjt:  AGQVGRSFGRSATSERGWWKDSK--DEDNDRAPGKTATYNSQQRDEMPQ--REDNHTRHRDGSSKVEVDAPTPARKRPAFREKKIAVDSENVDKAAVASE

Query:  TKKSSDPHHPEDGRERREERGRDTRYSEKL-NKHVTGDMGAKRDEIKRGGYPVRERYGNG-GGGNYRGRDRFGGRQGYRAGAGGTRVEKWKHDLFHEANR
        +KKS+D H  ++GRERREERGRD RYSEKL NKH  GDM +KRDE+KR GYPVRERYGNG GGGNYRGRDRFGGRQGYR    GTRVEKWKHDLFHEANR
Subjt:  TKKSSDPHHPEDGRERREERGRDTRYSEKL-NKHVTGDMGAKRDEIKRGGYPVRERYGNG-GGGNYRGRDRFGGRQGYRAGAGGTRVEKWKHDLFHEANR

Query:  SPTPKNEEDQIAKVEALLAS
        SPTPKNEEDQIAKVEALL+S
Subjt:  SPTPKNEEDQIAKVEALLAS

A0A6J1FPJ0 pre-mRNA-splicing factor CWC25-like isoform X1

4.7e-132

81.5

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Query:  SPKRSRRDRKPLEEKLSRNSSSHIDDNKDRDQKHELRHRGQNLIPHESSLALDSKPEGGVVSKEANKNSDGGRDGGTKHSLNPTEVSRVRSYFQHEERGN
        SPKRSRRDRKPLEEKLSRNSSSH++DNKDRDQKHELRH GQ+  PHESSLALDS PEGG VSK AN+NSD  R+GGTK SLNPTEV R RSYFQH++RG+
Subjt:  SPKRSRRDRKPLEEKLSRNSSSHIDDNKDRDQKHELRHRGQNLIPHESSLALDSKPEGGVVSKEANKNSDGGRDGGTKHSLNPTEVSRVRSYFQHEERGN

Query:  AGQVGRSFGRSATSERGWWKDSKDED--NDRAPGKTATYNSQQRDEMPQ--REDNHTRHRDGSSKVEVDAPTPARKRPAFREKKIAVDSENVDKAAVASE
        AGQVGRSFGRS++S RGWWKDSK++D  +DRA GKTATYNSQ+RDE+PQ  +EDNHTR RDGSSK+EVD+  PARKRPAFREKKI  D+EN +KA +ASE
Subjt:  AGQVGRSFGRSATSERGWWKDSKDED--NDRAPGKTATYNSQQRDEMPQ--REDNHTRHRDGSSKVEVDAPTPARKRPAFREKKIAVDSENVDKAAVASE

Query:  TKKSSDPHHPEDGRERREERGRDTRYSEKLNKHVTGDMGAKRDEIKRGGYPVRERYGN-GGGGNYRGRDRFGGRQGYRAGAGGTRVEKWKHDLFHEANRS
        +KK SDPH P+DGRERREERGRDTRYS+KL+KHVTGDM +KRDE+KRGGY VRERYGN GGGGNYRGRDRFGGRQGY A +GGTRVEKWKHDLFHEANRS
Subjt:  TKKSSDPHHPEDGRERREERGRDTRYSEKLNKHVTGDMGAKRDEIKRGGYPVRERYGN-GGGGNYRGRDRFGGRQGYRAGAGGTRVEKWKHDLFHEANRS

Query:  PTPKNEEDQIAKVEALLAS
        PTPKNEEDQIAKVEALLAS
Subjt:  PTPKNEEDQIAKVEALLAS

A0A6J1FQX4 pre-mRNA-splicing factor CWC25-like isoform X2

7.2e-125

78.62

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Query:  SPKRSRRDRKPLEEKLSRNSSSHIDDNKDRDQKHELRHRGQNLIPHESSLALDSKPEGGVVSKEANKNSDGGRDGGTKHSLNPTEVSRVRSYFQHEERGN
        SPKRSRRDRKPLEEKLSRNSSSH++DNKDRDQKHELRH GQ+  PHESSLALDS PEGG VSK AN+NSD  R+GGTK SLNPTEV R RSYFQH++RG+
Subjt:  SPKRSRRDRKPLEEKLSRNSSSHIDDNKDRDQKHELRHRGQNLIPHESSLALDSKPEGGVVSKEANKNSDGGRDGGTKHSLNPTEVSRVRSYFQHEERGN

Query:  AGQVGRSFGRSATSERGWWKDSKDED--NDRAPGKTATYNSQQRDEMPQ--REDNHTRHRDGSSKVEVDAPTPARKRPAFREKKIAVDSENVDKAAVASE
        AGQVGRSFGRS++S RGWWKDSK++D  +DRA GKTATYNSQ+RDE+PQ  +EDNHTR RDGSSK+EVD+  PARKRPAFREKKI  D+EN +KA +ASE
Subjt:  AGQVGRSFGRSATSERGWWKDSKDED--NDRAPGKTATYNSQQRDEMPQ--REDNHTRHRDGSSKVEVDAPTPARKRPAFREKKIAVDSENVDKAAVASE

Query:  TKKSSDPHHPEDGRERREERGRDTRYSEKLNKHVTGDMGAKRDEIKRGGYPVRERYGNGGGGNYRGRDRFGGRQGYRAGAGGTRVEKWKHDLFHEANRSP
        +KK SDPH P+DGRERREERGRDTRYS+KL+KHVTGDM +KRDE+KR           GGGGNYRGRDRFGGRQGY A +GGTRVEKWKHDLFHEANRSP
Subjt:  TKKSSDPHHPEDGRERREERGRDTRYSEKLNKHVTGDMGAKRDEIKRGGYPVRERYGNGGGGNYRGRDRFGGRQGYRAGAGGTRVEKWKHDLFHEANRSP

Query:  TPKNEEDQIAKVEALLAS
        TPKNEEDQIAKVEALLAS
Subjt:  TPKNEEDQIAKVEALLAS

A0A6J1J5K1 pre-mRNA-splicing factor CWC25 isoform X1

1.2e-130

80.88

Show/hide

Query:  SPKRSRRDRKPLEEKLSRNSSSHIDDNKDRDQKHELRHRGQNLIPHESSLALDSKPEGGVVSKEANKNSDGGRDGGTKHSLNPTEVSRVRSYFQHEERGN
        SPKRSRRDRKPLEEKLSRNSSSH++DNKDRDQKHELRH GQ++ PHESSLALDS PEGG VSK AN+NSD  R+GGTK +LNPTEV R RSYFQH++RG+
Subjt:  SPKRSRRDRKPLEEKLSRNSSSHIDDNKDRDQKHELRHRGQNLIPHESSLALDSKPEGGVVSKEANKNSDGGRDGGTKHSLNPTEVSRVRSYFQHEERGN

Query:  AGQVGRSFGRSATSERGWWKDSKDED--NDRAPGKTATYNSQQRDEMPQ--REDNHTRHRDGSSKVEVDAPTPARKRPAFREKKIAVDSENVDKAAVASE
        AGQVGRSFGRS++S RGWWKDSK++D  +DRA GKTATYNSQ+RDE+PQ  +EDNHTR RDGSSK+EVD+  PARKRPAFREKKI  D+EN +KA +ASE
Subjt:  AGQVGRSFGRSATSERGWWKDSKDED--NDRAPGKTATYNSQQRDEMPQ--REDNHTRHRDGSSKVEVDAPTPARKRPAFREKKIAVDSENVDKAAVASE

Query:  TKKSSDPHHPEDGRERREERGRDTRYSEKLNKHVTGDMGAKRDEIKRGGYPVRERYGN-GGGGNYRGRDRFGGRQGYRAGAGGTRVEKWKHDLFHEANRS
        +KK SDPH P+DGRERREERGRDTRYS+KL+KHVTGDM +KRDE+KRGGY VRERYGN GGGGNYRGRDRFGGRQGY A +GGTRVEKWKHDLFHEANRS
Subjt:  TKKSSDPHHPEDGRERREERGRDTRYSEKLNKHVTGDMGAKRDEIKRGGYPVRERYGN-GGGGNYRGRDRFGGRQGYRAGAGGTRVEKWKHDLFHEANRS

Query:  PTPKNEEDQIAKVEALLAS
        PTPKNEE QIAKVEALLAS
Subjt:  PTPKNEEDQIAKVEALLAS

A0A6J1JAV5 pre-mRNA-splicing factor CWC25 isoform X2

1.8e-123

77.99

Show/hide

Query:  SPKRSRRDRKPLEEKLSRNSSSHIDDNKDRDQKHELRHRGQNLIPHESSLALDSKPEGGVVSKEANKNSDGGRDGGTKHSLNPTEVSRVRSYFQHEERGN
        SPKRSRRDRKPLEEKLSRNSSSH++DNKDRDQKHELRH GQ++ PHESSLALDS PEGG VSK AN+NSD  R+GGTK +LNPTEV R RSYFQH++RG+
Subjt:  SPKRSRRDRKPLEEKLSRNSSSHIDDNKDRDQKHELRHRGQNLIPHESSLALDSKPEGGVVSKEANKNSDGGRDGGTKHSLNPTEVSRVRSYFQHEERGN

Query:  AGQVGRSFGRSATSERGWWKDSKDED--NDRAPGKTATYNSQQRDEMPQ--REDNHTRHRDGSSKVEVDAPTPARKRPAFREKKIAVDSENVDKAAVASE
        AGQVGRSFGRS++S RGWWKDSK++D  +DRA GKTATYNSQ+RDE+PQ  +EDNHTR RDGSSK+EVD+  PARKRPAFREKKI  D+EN +KA +ASE
Subjt:  AGQVGRSFGRSATSERGWWKDSKDED--NDRAPGKTATYNSQQRDEMPQ--REDNHTRHRDGSSKVEVDAPTPARKRPAFREKKIAVDSENVDKAAVASE

Query:  TKKSSDPHHPEDGRERREERGRDTRYSEKLNKHVTGDMGAKRDEIKRGGYPVRERYGNGGGGNYRGRDRFGGRQGYRAGAGGTRVEKWKHDLFHEANRSP
        +KK SDPH P+DGRERREERGRDTRYS+KL+KHVTGDM +KRDE+KR           GGGGNYRGRDRFGGRQGY A +GGTRVEKWKHDLFHEANRSP
Subjt:  TKKSSDPHHPEDGRERREERGRDTRYSEKLNKHVTGDMGAKRDEIKRGGYPVRERYGNGGGGNYRGRDRFGGRQGYRAGAGGTRVEKWKHDLFHEANRSP

Query:  TPKNEEDQIAKVEALLAS
        TPKNEE QIAKVEALLAS
Subjt:  TPKNEEDQIAKVEALLAS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G19650.1 cyclin-related

1.3e-20

33.33

Show/hide

Query:  SPKRSRRDRKPLEEKLSRNSSSHIDDNKDRDQKHELRHRGQNLIPHESSLALDSKPEGGVVSKEANKNSDGGRDGGTKHSLNPTEVSRVRSYFQHEERGN
        SPKRSRRD KP  E++       + D  D +     ++  Q+L   ++ L LD+       S++ ++    G    TK + + ++V R R Y QH++R +
Subjt:  SPKRSRRDRKPLEEKLSRNSSSHIDDNKDRDQKHELRHRGQNLIPHESSLALDSKPEGGVVSKEANKNSDGGRDGGTKHSLNPTEVSRVRSYFQHEERGN

Query:  AGQVGRSFGRSATSERGWWKDSKDEDNDRAPGKTATYNSQQRDEMPQREDNHTRHRDGSSKVEVDAPTPARKRPAFREKKIAVDSENVDKAAVASETKKS
         G+V     R  TS RG W+ S+D+ N RA     + + +  D+   R D      D    +       +RKRPAFREKKI            A ET  +
Subjt:  AGQVGRSFGRSATSERGWWKDSKDEDNDRAPGKTATYNSQQRDEMPQREDNHTRHRDGSSKVEVDAPTPARKRPAFREKKIAVDSENVDKAAVASETKKS

Query:  SDPHHPEDGRE----RREERGRDTRYSEKLNKHVTGDMGAKRDEIKRGGYPVRERYGNGGGGNYRG-RDRF--GGRQGYRAGAGGTRVEKWKHDLFHEAN
        +D    EDG++     R +  R+ R +    +H    MG  RD +    +   +  G G   +Y+  RDRF   GR G+ +G+     +KW HDLF EAN
Subjt:  SDPHHPEDGRE----RREERGRDTRYSEKLNKHVTGDMGAKRDEIKRGGYPVRERYGNGGGGNYRG-RDRF--GGRQGYRAGAGGTRVEKWKHDLFHEAN

Query:  RSPTPKNEEDQIAKVEALLAS
        +SP    EE+QIAKVEALLAS
Subjt:  RSPTPKNEEDQIAKVEALLAS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

CTTGTTGTTATTAGTCCTAAGAGGTCTAGGAGGGACAGGAAACCATTAGAGGAGAAGTTATCCAGAAACTCTAGTTCTCACATTGATGATAATAAAGATCGGGATCAGAA
GCATGAGCTTCGTCACAGAGGGCAAAATCTGATACCCCATGAGTCTTCATTAGCACTTGATTCTAAGCCAGAAGGTGGGGTTGTTAGCAAAGAGGCAAACAAGAACAGTG
ATGGGGGGAGGGATGGAGGGACTAAACATTCATTGAATCCCACTGAAGTATCTCGAGTGCGATCTTATTTTCAGCACGAGGAACGTGGTAATGCCGGGCAAGTTGGTCGA
AGCTTTGGTCGGAGTGCAACTAGTGAGCGTGGTTGGTGGAAGGATTCGAAGGATGAGGATAACGATAGGGCACCTGGAAAGACAGCAACTTACAATTCACAGCAAAGAGA
TGAGATGCCACAAAGGGAGGATAATCACACGAGGCATCGTGATGGATCCTCGAAAGTGGAGGTTGATGCACCCACTCCTGCTCGGAAAAGGCCTGCATTTAGGGAAAAGA
AGATTGCAGTAGACAGTGAAAATGTTGACAAAGCGGCTGTGGCATCAGAGACTAAGAAATCGAGTGATCCACACCATCCTGAGGACGGAAGGGAACGGAGAGAGGAAAGA
GGCCGCGACACACGTTATTCTGAGAAACTTAATAAGCATGTCACTGGAGACATGGGTGCCAAAAGGGATGAGATAAAGAGAGGTGGCTACCCAGTGAGAGAAAGGTATGG
GAATGGAGGTGGTGGGAACTACAGGGGAAGAGACAGATTCGGCGGGAGGCAAGGATATCGAGCGGGAGCGGGTGGTACTCGTGTAGAGAAATGGAAGCACGACCTGTTTC
ACGAGGCTAACCGGAGTCCAACTCCGAAGAATGAAGAGGACCAAATTGCCAAGGTTGAAGCTCTCCTCGCTTCT

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

LVVISPKRSRRDRKPLEEKLSRNSSSHIDDNKDRDQKHELRHRGQNLIPHESSLALDSKPEGGVVSKEANKNSDGGRDGGTKHSLNPTEVSRVRSYFQHEERGNAGQVGR
SFGRSATSERGWWKDSKDEDNDRAPGKTATYNSQQRDEMPQREDNHTRHRDGSSKVEVDAPTPARKRPAFREKKIAVDSENVDKAAVASETKKSSDPHHPEDGRERREER
GRDTRYSEKLNKHVTGDMGAKRDEIKRGGYPVRERYGNGGGGNYRGRDRFGGRQGYRAGAGGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVEALLAS

MS012401 (gene) of Bitter gourd (TR) v1 genome