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MS012404 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012404
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold63:490462..490740
RNA-Seq ExpressionMS012404
SyntenyMS012404
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044336.1 hypothetical protein E6C27_scaffold46G00610 [Cucumis melo var. makuwa]4.4e-1654.35Show/hide
Query:  KKIGLVAMMVVMMLMIATVVDSASPTTENIVVELELVTDRRGVNAFPRKVLKNG-GSGVCHATGWPCNPMYGC-PFPN-CACYTAGHCGDFV
        K +G  A M+VMML+IATVV+SA+  TE  ++  ELVTD    ++FPRK+++NG G+GVC   GWPC P +GC P    CACYT+G+CGD+V
Subjt:  KKIGLVAMMVVMMLMIATVVDSASPTTENIVVELELVTDRRGVNAFPRKVLKNG-GSGVCHATGWPCNPMYGC-PFPN-CACYTAGHCGDFV

KAA0044337.1 hypothetical protein E6C27_scaffold46G00620 [Cucumis melo var. makuwa]7.7e-2163.04Show/hide
Query:  KKIGLVAMMVVMMLMIATVVDSASPTTENIVVELELVTDRRGVNAFPRKVLKNG-GSGVCHATGWPCNPMYGC-PF-PNCACYTAGHCGDFV
        + IG  A M+VMML+IATVV+SASPT + I    +LVTD     +FPRK+++NG G+GVC  TGWPCNP YGC PF  +CACYTAGHCGDFV
Subjt:  KKIGLVAMMVVMMLMIATVVDSASPTTENIVVELELVTDRRGVNAFPRKVLKNG-GSGVCHATGWPCNPMYGC-PF-PNCACYTAGHCGDFV

KAA0044338.1 hypothetical protein E6C27_scaffold46G00630 [Cucumis melo var. makuwa]1.7e-0752.53Show/hide
Query:  MESKK-KIGL-VAMMVVMML--MIATVVDSASPTTENIVVELELVTDRRGVNAFPRK-VLKNGG-SGVCHATGWPCNPMYGCPFPNCACYTAGHCGDFV
        MESKK   GL VA +VVMM+  MIAT+ DS + TTEN+     +     G +AFPRK ++KNG  +GVC   G  C     CP  NCACYTAGHCGD+V
Subjt:  MESKK-KIGL-VAMMVVMML--MIATVVDSASPTTENIVVELELVTDRRGVNAFPRK-VLKNGG-SGVCHATGWPCNPMYGCPFPNCACYTAGHCGDFV

KGN52762.1 hypothetical protein Csa_014579 [Cucumis sativus]3.9e-1761.7Show/hide
Query:  KKIGL-VAMMVVMMLMIATVVDSASPTTENIVVELELVTDRRGVNAFPRKVLKNG-GSGVCHATGWPCNPMY-GC-PFPN-CACYTAGHCGDFV
        K IGL VA M+VMML+IATVV+SASPT +  +  +ELVT+    ++FPRK+++NG G+GVC   G PCNP Y GC PF + CACYTAGHCGDFV
Subjt:  KKIGL-VAMMVVMMLMIATVVDSASPTTENIVVELELVTDRRGVNAFPRKVLKNG-GSGVCHATGWPCNPMY-GC-PFPN-CACYTAGHCGDFV

KGN52763.1 hypothetical protein Csa_014543 [Cucumis sativus]3.6e-1053.61Show/hide
Query:  MESKKK-IGLVAMMVVMML--MIATVVDSASPTTENIVVELELVTDRRGVNAFPRK-VLKNGGSGVCHATGWPCNPMYGCPFPNCACYTAGHCGDFV
        MESKKK I  VA +VV+M+  MIAT+ DSA+  TEN+      V    G +AFPRK V+KNG +GVC   G  C     CP  +CACYTAGHCGD+V
Subjt:  MESKKK-IGLVAMMVVMML--MIATVVDSASPTTENIVVELELVTDRRGVNAFPRK-VLKNGGSGVCHATGWPCNPMYGCPFPNCACYTAGHCGDFV

TrEMBL top hitse value%identityAlignment
A0A0A0KT53 Uncharacterized protein1.7e-1053.61Show/hide
Query:  MESKKK-IGLVAMMVVMML--MIATVVDSASPTTENIVVELELVTDRRGVNAFPRK-VLKNGGSGVCHATGWPCNPMYGCPFPNCACYTAGHCGDFV
        MESKKK I  VA +VV+M+  MIAT+ DSA+  TEN+      V    G +AFPRK V+KNG +GVC   G  C     CP  +CACYTAGHCGD+V
Subjt:  MESKKK-IGLVAMMVVMML--MIATVVDSASPTTENIVVELELVTDRRGVNAFPRK-VLKNGGSGVCHATGWPCNPMYGCPFPNCACYTAGHCGDFV

A0A0A0KWE4 Uncharacterized protein1.9e-1761.7Show/hide
Query:  KKIGL-VAMMVVMMLMIATVVDSASPTTENIVVELELVTDRRGVNAFPRKVLKNG-GSGVCHATGWPCNPMY-GC-PFPN-CACYTAGHCGDFV
        K IGL VA M+VMML+IATVV+SASPT +  +  +ELVT+    ++FPRK+++NG G+GVC   G PCNP Y GC PF + CACYTAGHCGDFV
Subjt:  KKIGL-VAMMVVMMLMIATVVDSASPTTENIVVELELVTDRRGVNAFPRKVLKNG-GSGVCHATGWPCNPMY-GC-PFPN-CACYTAGHCGDFV

A0A5D3E009 Uncharacterized protein8.0e-0852.53Show/hide
Query:  MESKK-KIGL-VAMMVVMML--MIATVVDSASPTTENIVVELELVTDRRGVNAFPRK-VLKNGG-SGVCHATGWPCNPMYGCPFPNCACYTAGHCGDFV
        MESKK   GL VA +VVMM+  MIAT+ DS + TTEN+     +     G +AFPRK ++KNG  +GVC   G  C     CP  NCACYTAGHCGD+V
Subjt:  MESKK-KIGL-VAMMVVMML--MIATVVDSASPTTENIVVELELVTDRRGVNAFPRK-VLKNGG-SGVCHATGWPCNPMYGCPFPNCACYTAGHCGDFV

A0A5D3E0N0 Uncharacterized protein3.7e-2163.04Show/hide
Query:  KKIGLVAMMVVMMLMIATVVDSASPTTENIVVELELVTDRRGVNAFPRKVLKNG-GSGVCHATGWPCNPMYGC-PF-PNCACYTAGHCGDFV
        + IG  A M+VMML+IATVV+SASPT + I    +LVTD     +FPRK+++NG G+GVC  TGWPCNP YGC PF  +CACYTAGHCGDFV
Subjt:  KKIGLVAMMVVMMLMIATVVDSASPTTENIVVELELVTDRRGVNAFPRKVLKNG-GSGVCHATGWPCNPMYGC-PF-PNCACYTAGHCGDFV

A0A5D3E254 Uncharacterized protein2.1e-1654.35Show/hide
Query:  KKIGLVAMMVVMMLMIATVVDSASPTTENIVVELELVTDRRGVNAFPRKVLKNG-GSGVCHATGWPCNPMYGC-PFPN-CACYTAGHCGDFV
        K +G  A M+VMML+IATVV+SA+  TE  ++  ELVTD    ++FPRK+++NG G+GVC   GWPC P +GC P    CACYT+G+CGD+V
Subjt:  KKIGLVAMMVVMMLMIATVVDSASPTTENIVVELELVTDRRGVNAFPRKVLKNG-GSGVCHATGWPCNPMYGC-PFPN-CACYTAGHCGDFV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGCAAGAAGAAGATTGGTTTGGTAGCGATGATGGTGGTGATGATGCTTATGATTGCTACTGTGGTCGACTCCGCCTCTCCTACGACCGAGAATATCGTAGTCGA
ACTCGAACTCGTCACCGACCGTCGGGGCGTCAATGCTTTCCCAAGAAAAGTACTGAAAAATGGAGGATCTGGTGTGTGCCATGCAACAGGTTGGCCGTGCAACCCTATGT
ACGGTTGCCCTTTCCCCAACTGTGCTTGCTACACTGCCGGCCATTGTGGAGATTTCGTG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGCAAGAAGAAGATTGGTTTGGTAGCGATGATGGTGGTGATGATGCTTATGATTGCTACTGTGGTCGACTCCGCCTCTCCTACGACCGAGAATATCGTAGTCGA
ACTCGAACTCGTCACCGACCGTCGGGGCGTCAATGCTTTCCCAAGAAAAGTACTGAAAAATGGAGGATCTGGTGTGTGCCATGCAACAGGTTGGCCGTGCAACCCTATGT
ACGGTTGCCCTTTCCCCAACTGTGCTTGCTACACTGCCGGCCATTGTGGAGATTTCGTG
Protein sequenceShow/hide protein sequence
MESKKKIGLVAMMVVMMLMIATVVDSASPTTENIVVELELVTDRRGVNAFPRKVLKNGGSGVCHATGWPCNPMYGCPFPNCACYTAGHCGDFV