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MS012411 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012411
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold63:520508..520771
RNA-Seq ExpressionMS012411
SyntenyMS012411
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044337.1 hypothetical protein E6C27_scaffold46G00620 [Cucumis melo var. makuwa]3.0e-0636.56Show/hide
Query:  MERARKNMSLVAVGVVMMFM--TAISATAYLENVAAELVAGGGTDAFPRKVMLKNGGNGVCLVRGKPCRSHKDC---PSNCACYTAGHCGDWV
        M+   +N+   A  +VMM +  T + + +  E +   +       +FPRK+M    GNGVC + G PC     C     +CACYTAGHCGD+V
Subjt:  MERARKNMSLVAVGVVMMFM--TAISATAYLENVAAELVAGGGTDAFPRKVMLKNGGNGVCLVRGKPCRSHKDC---PSNCACYTAGHCGDWV

KAA0044338.1 hypothetical protein E6C27_scaffold46G00630 [Cucumis melo var. makuwa]4.7e-2062.96Show/hide
Query:  SLVAVGVVMMFMTAISATAYLENVAAELVAGGGTDAFPRKVMLKNGG-NGVCLVRGKPCRSHKDCPSNCACYTAGHCGDWV
        ++V + VV M  T   +T   ENVA+  V  GG+ AFPRK ++KNG  NGVCLV+GK C+SHKDCPSNCACYTAGHCGDWV
Subjt:  SLVAVGVVMMFMTAISATAYLENVAAELVAGGGTDAFPRKVMLKNGG-NGVCLVRGKPCRSHKDCPSNCACYTAGHCGDWV

KAG6576916.1 hypothetical protein SDJN03_24490, partial [Cucurbita argyrosperma subsp. sororia]2.1e-0745.45Show/hide
Query:  MERARKNMSLVAVGVVMMFMTAISATAYLENVAAELVAGGGTDAFPRKVMLKNGGNGVCLVRGKPCRSHKDCPSNCACYTAGHCGDWV
        ME   KN  LV V +V M M A         +A   VA GG   F  K++LK+ G+  C      C +H+DCP NCACYTAGHCGD+V
Subjt:  MERARKNMSLVAVGVVMMFMTAISATAYLENVAAELVAGGGTDAFPRKVMLKNGGNGVCLVRGKPCRSHKDCPSNCACYTAGHCGDWV

KGN52762.1 hypothetical protein Csa_014579 [Cucumis sativus]5.0e-0642.27Show/hide
Query:  MERARKNMSL-VAVGVVMMFM--TAISATAYLENVA-AELVAG-GGTDAFPRKVMLKNGGNGVCLVRGKPCR-SHKDC---PSNCACYTAGHCGDWV
        M+R  KN+ L VA  +VMM +  T + + +  E +   ELV       +FPRK+M    GNGVC + G+PC   +  C      CACYTAGHCGD+V
Subjt:  MERARKNMSL-VAVGVVMMFM--TAISATAYLENVA-AELVAG-GGTDAFPRKVMLKNGGNGVCLVRGKPCR-SHKDC---PSNCACYTAGHCGDWV

KGN52763.1 hypothetical protein Csa_014543 [Cucumis sativus]1.5e-2162.37Show/hide
Query:  MERARKNMSLVAVGVVMM--FMTAI---SATAYLENVAAELVAGGGTDAFPRKVMLKNGGNGVCLVRGKPCRSHKDCPSNCACYTAGHCGDWV
        ME  +K++  VA  VV+M  FM A    SAT   ENVAA ++  GG+ AFPRK ++KNG NGVCLV+GK C+SHKDCPS+CACYTAGHCGDWV
Subjt:  MERARKNMSLVAVGVVMM--FMTAI---SATAYLENVAAELVAGGGTDAFPRKVMLKNGGNGVCLVRGKPCRSHKDCPSNCACYTAGHCGDWV

TrEMBL top hitse value%identityAlignment
A0A0A0KT53 Uncharacterized protein7.1e-2262.37Show/hide
Query:  MERARKNMSLVAVGVVMM--FMTAI---SATAYLENVAAELVAGGGTDAFPRKVMLKNGGNGVCLVRGKPCRSHKDCPSNCACYTAGHCGDWV
        ME  +K++  VA  VV+M  FM A    SAT   ENVAA ++  GG+ AFPRK ++KNG NGVCLV+GK C+SHKDCPS+CACYTAGHCGDWV
Subjt:  MERARKNMSLVAVGVVMM--FMTAI---SATAYLENVAAELVAGGGTDAFPRKVMLKNGGNGVCLVRGKPCRSHKDCPSNCACYTAGHCGDWV

A0A0A0KWE4 Uncharacterized protein2.4e-0642.27Show/hide
Query:  MERARKNMSL-VAVGVVMMFM--TAISATAYLENVA-AELVAG-GGTDAFPRKVMLKNGGNGVCLVRGKPCR-SHKDC---PSNCACYTAGHCGDWV
        M+R  KN+ L VA  +VMM +  T + + +  E +   ELV       +FPRK+M    GNGVC + G+PC   +  C      CACYTAGHCGD+V
Subjt:  MERARKNMSL-VAVGVVMMFM--TAISATAYLENVA-AELVAG-GGTDAFPRKVMLKNGGNGVCLVRGKPCR-SHKDC---PSNCACYTAGHCGDWV

A0A5D3E009 Uncharacterized protein2.3e-2062.96Show/hide
Query:  SLVAVGVVMMFMTAISATAYLENVAAELVAGGGTDAFPRKVMLKNGG-NGVCLVRGKPCRSHKDCPSNCACYTAGHCGDWV
        ++V + VV M  T   +T   ENVA+  V  GG+ AFPRK ++KNG  NGVCLV+GK C+SHKDCPSNCACYTAGHCGDWV
Subjt:  SLVAVGVVMMFMTAISATAYLENVAAELVAGGGTDAFPRKVMLKNGG-NGVCLVRGKPCRSHKDCPSNCACYTAGHCGDWV

A0A5D3E0N0 Uncharacterized protein1.4e-0636.56Show/hide
Query:  MERARKNMSLVAVGVVMMFM--TAISATAYLENVAAELVAGGGTDAFPRKVMLKNGGNGVCLVRGKPCRSHKDC---PSNCACYTAGHCGDWV
        M+   +N+   A  +VMM +  T + + +  E +   +       +FPRK+M    GNGVC + G PC     C     +CACYTAGHCGD+V
Subjt:  MERARKNMSLVAVGVVMMFM--TAISATAYLENVAAELVAGGGTDAFPRKVMLKNGGNGVCLVRGKPCRSHKDC---PSNCACYTAGHCGDWV

A0A5D3E254 Uncharacterized protein2.4e-0643.33Show/hide
Query:  KNMSLVAVGVVMMFMTAI---SATAYLENVAAELVAG-GGTDAFPRKVMLKNGGNGVCLVRGKPCRSHKDC---PSNCACYTAGHCGDWV
        KNM   A  +VMM + A    SA +  E    ELV       +FPRK+M    GNGVC +RG PC     C      CACYT+G+CGD+V
Subjt:  KNMSLVAVGVVMMFMTAI---SATAYLENVAAELVAG-GGTDAFPRKVMLKNGGNGVCLVRGKPCRSHKDC---PSNCACYTAGHCGDWV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGAGCTCGGAAGAATATGAGCTTGGTGGCGGTGGGGGTGGTGATGATGTTTATGACTGCTATTTCGGCGACCGCATACCTCGAGAATGTGGCGGCCGAGCTCGT
GGCCGGAGGCGGCACCGACGCTTTTCCGAGAAAAGTTATGCTGAAAAATGGAGGGAATGGAGTGTGTCTTGTTAGAGGTAAGCCTTGCAGATCTCACAAGGATTGCCCTT
CCAACTGTGCTTGCTACACCGCCGGCCACTGCGGAGATTGGGTC
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGAGCTCGGAAGAATATGAGCTTGGTGGCGGTGGGGGTGGTGATGATGTTTATGACTGCTATTTCGGCGACCGCATACCTCGAGAATGTGGCGGCCGAGCTCGT
GGCCGGAGGCGGCACCGACGCTTTTCCGAGAAAAGTTATGCTGAAAAATGGAGGGAATGGAGTGTGTCTTGTTAGAGGTAAGCCTTGCAGATCTCACAAGGATTGCCCTT
CCAACTGTGCTTGCTACACCGCCGGCCACTGCGGAGATTGGGTC
Protein sequenceShow/hide protein sequence
MERARKNMSLVAVGVVMMFMTAISATAYLENVAAELVAGGGTDAFPRKVMLKNGGNGVCLVRGKPCRSHKDCPSNCACYTAGHCGDWV