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MS012412 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012412
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold63:522342..522662
RNA-Seq ExpressionMS012412
SyntenyMS012412
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044340.1 putative beta-D-xylosidase 5 isoform X2 [Cucumis melo var. makuwa]4.5e-3373.45Show/hide
Query:  MEGLIPYLLHALKKQKPQHNYRSQSIGSSRSYHLL---NAESSHRRTRSDFQPPTFEF-PEQRSANELTHSRSVSK-GFGSSSRPSYGFESGLSSYPGQV
        MEGLIPYL HA+KKQKP+H+YRSQS+GSSRSYHLL   N ESSHRRTRSD+QPPTFEF  +QR + ELTHSRSV+K  FGSS+RPS GFES   SY GQV
Subjt:  MEGLIPYLLHALKKQKPQHNYRSQSIGSSRSYHLL---NAESSHRRTRSDFQPPTFEF-PEQRSANELTHSRSVSK-GFGSSSRPSYGFESGLSSYPGQV

Query:  SSKATY-YGNPPR
        S++  Y YGNPPR
Subjt:  SSKATY-YGNPPR

KAG6576920.1 hypothetical protein SDJN03_24494, partial [Cucurbita argyrosperma subsp. sororia]1.0e-2466.67Show/hide
Query:  MEGLIPYLLHALKKQKPQHNYRSQSIGSSRSYHLL-NAESSHRRTRSDFQPPTFEFPEQRSANELTHSRSVSKGFGSSSRPSYGFESGLSSYPGQVSSKA
        MEGLIPYL HA+KKQKP+H+YRSQS+GSSRSYHLL N ESSHRRTRSDFQPP FE+ +QRS +EL HSRSVSKG       ++G     SSY GQVS+  
Subjt:  MEGLIPYLLHALKKQKPQHNYRSQSIGSSRSYHLL-NAESSHRRTRSDFQPPTFEFPEQRSANELTHSRSVSKGFGSSSRPSYGFESGLSSYPGQVSSKA

Query:  TYYGNPPR
           GN PR
Subjt:  TYYGNPPR

KAG7014945.1 NADH-ubiquinone oxidoreductase chain 4L, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-2469.39Show/hide
Query:  MEGLIPYLLHALKKQKPQHNYRSQSIGSSRSYHLL-NAESSHRRTRSDFQPPTFEFPEQRSANELTHSRSVSKGFGSSSRPSYGFESGLSSYPGQVSS
        MEGLIPYL HA+KKQKP+H+YRSQS+GSSRSYHLL N ESSHRRTRSDFQPP FE+ +QRS +EL HSRSVSKG       ++G     SSY GQVS+
Subjt:  MEGLIPYLLHALKKQKPQHNYRSQSIGSSRSYHLL-NAESSHRRTRSDFQPPTFEFPEQRSANELTHSRSVSKGFGSSSRPSYGFESGLSSYPGQVSS

KGN52765.1 hypothetical protein Csa_015267 [Cucumis sativus]9.1e-3474.11Show/hide
Query:  MEGLIPYLLHALKKQKPQHNYRSQSIGSSRSYHLL---NAESSHRRTRSDFQPPTFEFPEQRSANELTHSRSVSK-GFGSSSRPSYGFESGLSSYPGQVS
        MEGLIPYL HA+KKQKP+H+YRSQS+GSSRSYHLL   N ESSHRRTRSD+QPPTFEF +QRS  ELTHSRSV+K  FGSS+RPS GFES   SY GQVS
Subjt:  MEGLIPYLLHALKKQKPQHNYRSQSIGSSRSYHLL---NAESSHRRTRSDFQPPTFEFPEQRSANELTHSRSVSK-GFGSSSRPSYGFESGLSSYPGQVS

Query:  SKATY-YGNPPR
        ++  Y YGNP R
Subjt:  SKATY-YGNPPR

XP_038905929.1 uncharacterized protein LOC120091851 [Benincasa hispida]6.5e-4081.65Show/hide
Query:  MEGLIPYLLHALKKQKPQHNYRSQSIGSSRSYHLL--NAESSHRRTRSDFQPPTFEFPEQRSANELTHSRSVSKG-FGSSSRPSYGFESGLSSYPGQVSS
        MEGLIPYL HA+KKQKP+HNYRSQS+GSSRSYHLL  N ESSHRRTRSDFQPP  EF +QRS +EL HSRSVSKG FGSS+RPSYGFESG SSYPGQV++
Subjt:  MEGLIPYLLHALKKQKPQHNYRSQSIGSSRSYHLL--NAESSHRRTRSDFQPPTFEFPEQRSANELTHSRSVSKG-FGSSSRPSYGFESGLSSYPGQVSS

Query:  KATYYGNPP
        K TYYGNPP
Subjt:  KATYYGNPP

TrEMBL top hitse value%identityAlignment
A0A0A0KT06 Uncharacterized protein4.4e-3474.11Show/hide
Query:  MEGLIPYLLHALKKQKPQHNYRSQSIGSSRSYHLL---NAESSHRRTRSDFQPPTFEFPEQRSANELTHSRSVSK-GFGSSSRPSYGFESGLSSYPGQVS
        MEGLIPYL HA+KKQKP+H+YRSQS+GSSRSYHLL   N ESSHRRTRSD+QPPTFEF +QRS  ELTHSRSV+K  FGSS+RPS GFES   SY GQVS
Subjt:  MEGLIPYLLHALKKQKPQHNYRSQSIGSSRSYHLL---NAESSHRRTRSDFQPPTFEFPEQRSANELTHSRSVSK-GFGSSSRPSYGFESGLSSYPGQVS

Query:  SKATY-YGNPPR
        ++  Y YGNP R
Subjt:  SKATY-YGNPPR

A0A2N9EKL5 Uncharacterized protein4.4e-1857.55Show/hide
Query:  MEGLIPYLLHALKKQKPQHNYRSQSIGSSRSYHLLN-----AESSHRRTRSDFQPPTFEFPEQRSANELTHSRSVSKGFGSSSRPSYGFESG--LSSYPG
        MEGLIP+LLHA+KKQ+PQ++YR  S GSSRSYHLLN     + SSHRRTRS+FQPPT EF  QRS +E   S SV+K    +S P+    SG  + SYP 
Subjt:  MEGLIPYLLHALKKQKPQHNYRSQSIGSSRSYHLLN-----AESSHRRTRSDFQPPTFEFPEQRSANELTHSRSVSKGFGSSSRPSYGFESG--LSSYPG

Query:  QVSSKA
        QV  +A
Subjt:  QVSSKA

A0A2N9EXY1 Uncharacterized protein5.8e-1857.55Show/hide
Query:  MEGLIPYLLHALKKQKPQHNYRSQSIGSSRSYHLLN-----AESSHRRTRSDFQPPTFEFPEQRSANELTHSRSVSKGFGSSSRPSYGFESG--LSSYPG
        MEGLIP+LLHA+KKQ+PQ++YR  S GSSRSYHLLN     + SSHRRTRS+FQPPT EF  QRS  E   S SV+K    +S P+    SG  + SYP 
Subjt:  MEGLIPYLLHALKKQKPQHNYRSQSIGSSRSYHLLN-----AESSHRRTRSDFQPPTFEFPEQRSANELTHSRSVSKGFGSSSRPSYGFESG--LSSYPG

Query:  QVSSKA
        QV  +A
Subjt:  QVSSKA

A0A5A7TM95 Putative beta-D-xylosidase 5 isoform X22.2e-3373.45Show/hide
Query:  MEGLIPYLLHALKKQKPQHNYRSQSIGSSRSYHLL---NAESSHRRTRSDFQPPTFEF-PEQRSANELTHSRSVSK-GFGSSSRPSYGFESGLSSYPGQV
        MEGLIPYL HA+KKQKP+H+YRSQS+GSSRSYHLL   N ESSHRRTRSD+QPPTFEF  +QR + ELTHSRSV+K  FGSS+RPS GFES   SY GQV
Subjt:  MEGLIPYLLHALKKQKPQHNYRSQSIGSSRSYHLL---NAESSHRRTRSDFQPPTFEF-PEQRSANELTHSRSVSK-GFGSSSRPSYGFESGLSSYPGQV

Query:  SSKATY-YGNPPR
        S++  Y YGNPPR
Subjt:  SSKATY-YGNPPR

A0A6P6AFC0 uncharacterized protein LOC1113090192.9e-1755.14Show/hide
Query:  MEGLIPYLLHALKKQKPQHNYRSQSIGSSRSYHLLNAE--------SSHRRTRSDFQPPTFEFPEQRSANELTHSRSVSKGFGSSSRPSYGFESGLSSYP
        MEGLIPYL+ A++KQKP H YRS S+GSSRSYHLL  +        SSHRRTRSDFQPPT EF EQRS  +   ++S + G  S + PS    S + SY 
Subjt:  MEGLIPYLLHALKKQKPQHNYRSQSIGSSRSYHLLNAE--------SSHRRTRSDFQPPTFEFPEQRSANELTHSRSVSKGFGSSSRPSYGFESGLSSYP

Query:  GQVSSKA
         Q +SKA
Subjt:  GQVSSKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G19615.1 unknown protein3.7e-0959.02Show/hide
Query:  MEGLIPYLLHALKK-QKPQH-NYRSQSIGSSRSYHLL---------NAESSHRRTRSDFQP
        MEGLIPYL+HA+KK  KP H  YRS S+GSSRSY  L            SSHRRTRSD+ P
Subjt:  MEGLIPYLLHALKK-QKPQH-NYRSQSIGSSRSYHLL---------NAESSHRRTRSDFQP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGCTTAATTCCATATCTTCTCCATGCCCTTAAGAAGCAGAAGCCACAACACAACTATAGAAGCCAGTCCATAGGTTCAAGTAGGAGCTACCATCTCCTGAATGC
CGAGTCGTCTCACCGGCGAACTCGATCGGATTTTCAGCCTCCAACGTTCGAGTTCCCGGAGCAGCGATCGGCGAACGAGTTGACGCATTCCCGCAGCGTTAGCAAGGGCT
TTGGATCATCTTCCAGACCTAGCTATGGGTTTGAATCTGGCTTATCTTCCTATCCTGGCCAGGTTTCAAGTAAGGCTACTTATTATGGTAATCCTCCTCGC
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGCTTAATTCCATATCTTCTCCATGCCCTTAAGAAGCAGAAGCCACAACACAACTATAGAAGCCAGTCCATAGGTTCAAGTAGGAGCTACCATCTCCTGAATGC
CGAGTCGTCTCACCGGCGAACTCGATCGGATTTTCAGCCTCCAACGTTCGAGTTCCCGGAGCAGCGATCGGCGAACGAGTTGACGCATTCCCGCAGCGTTAGCAAGGGCT
TTGGATCATCTTCCAGACCTAGCTATGGGTTTGAATCTGGCTTATCTTCCTATCCTGGCCAGGTTTCAAGTAAGGCTACTTATTATGGTAATCCTCCTCGC
Protein sequenceShow/hide protein sequence
MEGLIPYLLHALKKQKPQHNYRSQSIGSSRSYHLLNAESSHRRTRSDFQPPTFEFPEQRSANELTHSRSVSKGFGSSSRPSYGFESGLSSYPGQVSSKATYYGNPPR