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MS012424 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012424
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLOW QUALITY PROTEIN: leucine-rich repeat protein 2-like
Genome locationscaffold63:595590..598127
RNA-Seq ExpressionMS012424
SyntenyMS012424
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007513 - Uncharacterised protein family SERF, N-terminal
IPR026939 - ZNF706/At2g23090 superfamily
IPR039438 - At2g23090-like, zinc-binding domain
IPR039713 - At2g23090-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152272.1 uncharacterized protein At2g23090 [Cucumis sativus]1.5e-3397.4Show/hide
Query:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFMCTTSEVKCREHAEAKHPKADVSTCFPHLQK
        MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFMCTTSEVKCREHAEAKHPK+DV TCFPHLQK
Subjt:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFMCTTSEVKCREHAEAKHPKADVSTCFPHLQK
XP_022149288.1 uncharacterized protein At2g23090-like [Momordica charantia]1.3e-34100Show/hide
Query:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFMCTTSEVKCREHAEAKHPKADVSTCFPHLQK
        MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFMCTTSEVKCREHAEAKHPKADVSTCFPHLQK
Subjt:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFMCTTSEVKCREHAEAKHPKADVSTCFPHLQK
XP_022922955.1 uncharacterized protein At2g23090-like [Cucurbita moschata]1.2e-3294.81Show/hide
Query:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFMCTTSEVKCREHAEAKHPKADVSTCFPHLQK
        MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTF+CTTSEVKCREHAEAKHPK+DV +CFPHLQK
Subjt:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFMCTTSEVKCREHAEAKHPKADVSTCFPHLQK
XP_022941597.1 uncharacterized protein At2g23090-like [Cucurbita moschata]1.2e-3294.81Show/hide
Query:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFMCTTSEVKCREHAEAKHPKADVSTCFPHLQK
        MGGGNGQKAKMARE+NLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFMCTTSEVKCREHAEAKHPK+DV  CFPHLQK
Subjt:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFMCTTSEVKCREHAEAKHPKADVSTCFPHLQK
XP_023552184.1 uncharacterized protein At2g23090-like [Cucurbita pepo subsp. pepo]1.2e-3294.81Show/hide
Query:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFMCTTSEVKCREHAEAKHPKADVSTCFPHLQK
        MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTF+CTTSEVKCREHAEAKHPK+DV +CFPHLQK
Subjt:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFMCTTSEVKCREHAEAKHPKADVSTCFPHLQK
TrEMBL top hitse value%identityAlignment
A0A0A0KV37 Uncharacterized protein7.1e-3497.4Show/hide
Query:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFMCTTSEVKCREHAEAKHPKADVSTCFPHLQK
        MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFMCTTSEVKCREHAEAKHPK+DV TCFPHLQK
Subjt:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFMCTTSEVKCREHAEAKHPKADVSTCFPHLQK
A0A1S3BZP7 uncharacterized protein At2g23090-like7.1e-3497.4Show/hide
Query:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFMCTTSEVKCREHAEAKHPKADVSTCFPHLQK
        MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFMCTTSEVKCREHAEAKHPK+DV TCFPHLQK
Subjt:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFMCTTSEVKCREHAEAKHPKADVSTCFPHLQK
A0A6J1D6E9 uncharacterized protein At2g23090-like6.4e-35100Show/hide
Query:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFMCTTSEVKCREHAEAKHPKADVSTCFPHLQK
        MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFMCTTSEVKCREHAEAKHPKADVSTCFPHLQK
Subjt:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFMCTTSEVKCREHAEAKHPKADVSTCFPHLQK
A0A6J1EA95 uncharacterized protein At2g23090-like6.0e-3394.81Show/hide
Query:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFMCTTSEVKCREHAEAKHPKADVSTCFPHLQK
        MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTF+CTTSEVKCREHAEAKHPK+DV +CFPHLQK
Subjt:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFMCTTSEVKCREHAEAKHPKADVSTCFPHLQK
A0A6J1J8V9 uncharacterized protein At2g23090-like6.0e-3394.81Show/hide
Query:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFMCTTSEVKCREHAEAKHPKADVSTCFPHLQK
        MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTF+CTTSEVKCREHAEAKHPK+DV +CFPHLQK
Subjt:  MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFMCTTSEVKCREHAEAKHPKADVSTCFPHLQK
SwissProt top hitse value%identityAlignment
O64818 Uncharacterized protein At2g230901.9e-2880.77Show/hide
Query:  MGGGNGQKAKMARERNLEKQKGA-KGSQLDSNKKAMTIQCKVCMQTFMCTTSEVKCREHAEAKHPKADVSTCFPHLQK
        MGGGN QK+ MAR +NLEK K A KGSQL++NKKAM+IQCKVCMQTF+CTTSEVKCREHAEAKHPKADV  CFPHL+K
Subjt:  MGGGNGQKAKMARERNLEKQKGA-KGSQLDSNKKAMTIQCKVCMQTFMCTTSEVKCREHAEAKHPKADVSTCFPHLQK
Arabidopsis top hitse value%identityAlignment
AT2G23090.1 Uncharacterised protein family SERF1.4e-2980.77Show/hide
Query:  MGGGNGQKAKMARERNLEKQKGA-KGSQLDSNKKAMTIQCKVCMQTFMCTTSEVKCREHAEAKHPKADVSTCFPHLQK
        MGGGN QK+ MAR +NLEK K A KGSQL++NKKAM+IQCKVCMQTF+CTTSEVKCREHAEAKHPKADV  CFPHL+K
Subjt:  MGGGNGQKAKMARERNLEKQKGA-KGSQLDSNKKAMTIQCKVCMQTFMCTTSEVKCREHAEAKHPKADVSTCFPHLQK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGAGGCAACGGGCAGAAGGCCAAGATGGCTCGCGAGAGAAACTTGGAGAAGCAAAAAGGCGCCAAGGGAAGCCAGCTCGATTCCAACAAAAAAGCCATGACTAT
CCAGTGCAAGGTGTGCATGCAGACATTTATGTGTACAACCTCAGAGGTGAAATGTAGGGAGCATGCTGAAGCAAAACACCCAAAAGCTGATGTTTCCACCTGTTTCCCCC
ATCTTCAGAAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGAGGCAACGGGCAGAAGGCCAAGATGGCTCGCGAGAGAAACTTGGAGAAGCAAAAAGGCGCCAAGGGAAGCCAGCTCGATTCCAACAAAAAAGCCATGACTAT
CCAGTGCAAGGTGTGCATGCAGACATTTATGTGTACAACCTCAGAGGTGAAATGTAGGGAGCATGCTGAAGCAAAACACCCAAAAGCTGATGTTTCCACCTGTTTCCCCC
ATCTTCAGAAG
Protein sequenceShow/hide protein sequence
MGGGNGQKAKMARERNLEKQKGAKGSQLDSNKKAMTIQCKVCMQTFMCTTSEVKCREHAEAKHPKADVSTCFPHLQK