; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS012432 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012432
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionhomeobox protein HAT3.1 isoform X2
Genome locationscaffold63:652110..652364
RNA-Seq ExpressionMS012432
SyntenyMS012432
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN57486.1 hypothetical protein Csa_010932 [Cucumis sativus]4.7e-0962.86Show/hide
Query:  WRRAPALAPARNMCGGSGRQTVRVKAGRNAAACNGGPDLEDSETKPLYSLFALRTRTATTTTTRTIDKIL
        WRRA          GGSGRQTVRVKA +NA + NGGPDLEDSETKPLYSLF LRT+  T   T  I K L
Subjt:  WRRAPALAPARNMCGGSGRQTVRVKAGRNAAACNGGPDLEDSETKPLYSLFALRTRTATTTTTRTIDKIL
XP_022149327.1 homeobox protein HAT3.1 isoform X2 [Momordica charantia]2.4e-3798.82Show/hide
Query:  WAGQNWRRAPALAPARNMCGGSGRQTVRVKAGRNAAACNGGPDLEDSETKPLYSLFALRTRTATTTTTRTIDKILLTPPTRSKTR
        WAGQNWRRAPALAPARNMCGGSGRQTVRVKAGRNAAACNGGPDLEDSETKPLYSLFALRTRTATTTT RTIDKILLTPPTRSKTR
Subjt:  WAGQNWRRAPALAPARNMCGGSGRQTVRVKAGRNAAACNGGPDLEDSETKPLYSLFALRTRTATTTTTRTIDKILLTPPTRSKTR
TrEMBL top hitse value%identityAlignment
A0A0A0LBT3 Uncharacterized protein2.3e-0962.86Show/hide
Query:  WRRAPALAPARNMCGGSGRQTVRVKAGRNAAACNGGPDLEDSETKPLYSLFALRTRTATTTTTRTIDKIL
        WRRA          GGSGRQTVRVKA +NA + NGGPDLEDSETKPLYSLF LRT+  T   T  I K L
Subjt:  WRRAPALAPARNMCGGSGRQTVRVKAGRNAAACNGGPDLEDSETKPLYSLFALRTRTATTTTTRTIDKIL
A0A6J1D7M5 homeobox protein HAT3.1 isoform X21.2e-3798.82Show/hide
Query:  WAGQNWRRAPALAPARNMCGGSGRQTVRVKAGRNAAACNGGPDLEDSETKPLYSLFALRTRTATTTTTRTIDKILLTPPTRSKTR
        WAGQNWRRAPALAPARNMCGGSGRQTVRVKAGRNAAACNGGPDLEDSETKPLYSLFALRTRTATTTT RTIDKILLTPPTRSKTR
Subjt:  WAGQNWRRAPALAPARNMCGGSGRQTVRVKAGRNAAACNGGPDLEDSETKPLYSLFALRTRTATTTTTRTIDKILLTPPTRSKTR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGGCCGGGCAGAATTGGAGGCGCGCACCCGCACTCGCACCCGCACGCAATATGTGCGGCGGTAGCGGAAGGCAGACGGTGCGCGTGAAGGCTGGCCGAAATGCAGCTGC
TTGTAACGGTGGCCCAGATTTGGAGGACTCTGAGACAAAGCCGCTTTATTCTCTCTTCGCGCTGAGGACGAGAACAGCAACAACAACAACAACAAGAACCATCGACAAAA
TTTTACTCACGCCACCAACAAGATCCAAAACCAGG
mRNA sequenceShow/hide mRNA sequence
TGGGCCGGGCAGAATTGGAGGCGCGCACCCGCACTCGCACCCGCACGCAATATGTGCGGCGGTAGCGGAAGGCAGACGGTGCGCGTGAAGGCTGGCCGAAATGCAGCTGC
TTGTAACGGTGGCCCAGATTTGGAGGACTCTGAGACAAAGCCGCTTTATTCTCTCTTCGCGCTGAGGACGAGAACAGCAACAACAACAACAACAAGAACCATCGACAAAA
TTTTACTCACGCCACCAACAAGATCCAAAACCAGG
Protein sequenceShow/hide protein sequence
WAGQNWRRAPALAPARNMCGGSGRQTVRVKAGRNAAACNGGPDLEDSETKPLYSLFALRTRTATTTTTRTIDKILLTPPTRSKTR