; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS012436 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012436
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCaspase-6 protein
Genome locationscaffold63:669100..669252
RNA-Seq ExpressionMS012436
SyntenyMS012436
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149347.1 uncharacterized protein LOC111017781 isoform X1 [Momordica charantia]8.5e-22100Show/hide
Query:  SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR
        SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR
Subjt:  SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR

XP_022922830.1 uncharacterized protein LOC111430696 isoform X1 [Cucurbita moschata]4.2e-2198.04Show/hide
Query:  SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR
        SRNLGELGCTQSLLPMH IMGATCLTSHLCVSARAFCELSHGTFCRTCQDR
Subjt:  SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR

XP_022984255.1 uncharacterized protein LOC111482625 isoform X1 [Cucurbita maxima]1.2e-2096.08Show/hide
Query:  SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR
        SRNLGELGCTQSLLPMH IMGATCLTSHLCV ARAFCELSHGTFCRTCQDR
Subjt:  SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR

XP_023551739.1 uncharacterized protein LOC111809622 isoform X2 [Cucurbita pepo subsp. pepo]5.1e-1992.16Show/hide
Query:  SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR
        SR LGELGCTQSLLPMH IMGATC TSHLCVSARAFCELSHGTFC TCQDR
Subjt:  SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR

XP_038882967.1 uncharacterized protein LOC120074027 isoform X1 [Benincasa hispida]4.2e-2198.04Show/hide
Query:  SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR
        SRNLGELGCTQSLLPMH IMGATCLTSHLCVSARAFCELSHGTFCRTCQDR
Subjt:  SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR

TrEMBL top hitse value%identityAlignment
A0A6J1D5H0 uncharacterized protein LOC111017781 isoform X32.0e-16100Show/hide
Query:  SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGT
        SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGT
Subjt:  SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGT

A0A6J1D7P5 uncharacterized protein LOC111017781 isoform X14.1e-22100Show/hide
Query:  SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR
        SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR
Subjt:  SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR

A0A6J1E9X4 uncharacterized protein LOC111430696 isoform X12.0e-2198.04Show/hide
Query:  SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR
        SRNLGELGCTQSLLPMH IMGATCLTSHLCVSARAFCELSHGTFCRTCQDR
Subjt:  SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR

A0A6J1FMT0 uncharacterized protein LOC111446884 isoform X13.6e-1892.16Show/hide
Query:  SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR
        SRNLGELGCTQSLL MH I+GATCLTSHLCVS RAFCELSHGTFCRTCQDR
Subjt:  SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR

A0A6J1J861 uncharacterized protein LOC111482625 isoform X15.9e-2196.08Show/hide
Query:  SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR
        SRNLGELGCTQSLLPMH IMGATCLTSHLCV ARAFCELSHGTFCRTCQDR
Subjt:  SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G15000.1 unknown protein1.6e-1065.12Show/hide
Query:  SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGT
        SRNLG LGCTQS LP++ ++  + LTSHL V+ RAFCELS+GT
Subjt:  SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGT

AT2G15000.4 unknown protein8.2e-1568.63Show/hide
Query:  SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR
        SRNLG LGCTQS LP++ ++  + LTSHL V+ RAFCELS+GTF RTCQDR
Subjt:  SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR

AT2G15000.5 unknown protein8.2e-1568.63Show/hide
Query:  SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR
        SRNLG LGCTQS LP++ ++  + LTSHL V+ RAFCELS+GTF RTCQDR
Subjt:  SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR

AT4G34265.1 unknown protein3.6e-1065.85Show/hide
Query:  RNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHG
        RNLGELGCT+S LP++ ++ A  LTSHL V+ RAFCELS+G
Subjt:  RNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHG

AT4G34265.2 unknown protein9.4e-1166.67Show/hide
Query:  RNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGT
        RNLGELGCT+S LP++ ++ A  LTSHL V+ RAFCELS+GT
Subjt:  RNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCCAGGAATTTGGGAGAACTGGGATGTACACAGTCTCTTCTGCCCATGCACGGCATCATGGGTGCTACCTGCCTGACATCCCACCTCTGTGTTAGCGCACGGGCCTTTTG
CGAGCTGTCTCATGGTACCTTCTGCCGTACTTGTCAGGATCGC
mRNA sequenceShow/hide mRNA sequence
TCCAGGAATTTGGGAGAACTGGGATGTACACAGTCTCTTCTGCCCATGCACGGCATCATGGGTGCTACCTGCCTGACATCCCACCTCTGTGTTAGCGCACGGGCCTTTTG
CGAGCTGTCTCATGGTACCTTCTGCCGTACTTGTCAGGATCGC
Protein sequenceShow/hide protein sequence
SRNLGELGCTQSLLPMHGIMGATCLTSHLCVSARAFCELSHGTFCRTCQDR