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MS012439 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012439
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLYR motif-containing protein At3g19508
Genome locationscaffold63:688861..689232
RNA-Seq ExpressionMS012439
SyntenyMS012439
Gene Ontology termsNA
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008456173.1 PREDICTED: LYR motif-containing protein At3g19508 [Cucumis melo]6.3e-3590.12Show/hide
Query:  MEKALRIYGGVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLQELFHRAYNHSVWVLNKYSVDPSAADKLREICF
        MEKALR+YG VLRLVRRLPKD+RPYYAKYARENFVNYREVDANDAKSL+ELFHRAYNHS+WVLNKYSVD SAADKL+EIC+
Subjt:  MEKALRIYGGVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLQELFHRAYNHSVWVLNKYSVDPSAADKLREICF
XP_015892821.1 LYR motif-containing protein At3g19508 [Ziziphus jujuba]1.6e-3385.19Show/hide
Query:  MEKALRIYGGVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLQELFHRAYNHSVWVLNKYSVDPSAADKLREICF
        MEKALRIYG +LRLVRRLPKD+RPYYAKYARENFVNYREVDAND+ +L+ELFHRAYNHS+WVLNKYSVD SAADKL+E+C+
Subjt:  MEKALRIYGGVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLQELFHRAYNHSVWVLNKYSVDPSAADKLREICF
XP_022149201.1 LYR motif-containing protein At3g19508 [Momordica charantia]3.2e-39100Show/hide
Query:  MEKALRIYGGVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLQELFHRAYNHSVWVLNKYSVDPSAADKLREICFK
        MEKALRIYGGVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLQELFHRAYNHSVWVLNKYSVDPSAADKLREICFK
Subjt:  MEKALRIYGGVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLQELFHRAYNHSVWVLNKYSVDPSAADKLREICFK
XP_022941949.1 LYR motif-containing protein At3g19508 [Cucurbita moschata]5.3e-3492.5Show/hide
Query:  MEKALRIYGGVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLQELFHRAYNHSVWVLNKYSVDPSAADKLREIC
        MEKALRIY  VLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSL+ELFHRAYNHSVWVLNKYSV+ SAADKL+EIC
Subjt:  MEKALRIYGGVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLQELFHRAYNHSVWVLNKYSVDPSAADKLREIC
XP_038898400.1 LYR motif-containing protein At3g19508 [Benincasa hispida]1.1e-3491.36Show/hide
Query:  MEKALRIYGGVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLQELFHRAYNHSVWVLNKYSVDPSAADKLREICF
        MEKALRIYG VLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSL+ELFHRAY HS+WVLNKYSVD SAADKL+EIC+
Subjt:  MEKALRIYGGVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLQELFHRAYNHSVWVLNKYSVDPSAADKLREICF
TrEMBL top hitse value%identityAlignment
A0A1S3C3W4 LYR motif-containing protein At3g195083.1e-3590.12Show/hide
Query:  MEKALRIYGGVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLQELFHRAYNHSVWVLNKYSVDPSAADKLREICF
        MEKALR+YG VLRLVRRLPKD+RPYYAKYARENFVNYREVDANDAKSL+ELFHRAYNHS+WVLNKYSVD SAADKL+EIC+
Subjt:  MEKALRIYGGVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLQELFHRAYNHSVWVLNKYSVDPSAADKLREICF
A0A5A7T6G8 LYR motif-containing protein3.1e-3590.12Show/hide
Query:  MEKALRIYGGVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLQELFHRAYNHSVWVLNKYSVDPSAADKLREICF
        MEKALR+YG VLRLVRRLPKD+RPYYAKYARENFVNYREVDANDAKSL+ELFHRAYNHS+WVLNKYSVD SAADKL+EIC+
Subjt:  MEKALRIYGGVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLQELFHRAYNHSVWVLNKYSVDPSAADKLREICF
A0A6J1D7N7 LYR motif-containing protein At3g195081.6e-39100Show/hide
Query:  MEKALRIYGGVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLQELFHRAYNHSVWVLNKYSVDPSAADKLREICFK
        MEKALRIYGGVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLQELFHRAYNHSVWVLNKYSVDPSAADKLREICFK
Subjt:  MEKALRIYGGVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLQELFHRAYNHSVWVLNKYSVDPSAADKLREICFK
A0A6J1FPX9 LYR motif-containing protein At3g195082.6e-3492.5Show/hide
Query:  MEKALRIYGGVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLQELFHRAYNHSVWVLNKYSVDPSAADKLREIC
        MEKALRIY  VLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSL+ELFHRAYNHSVWVLNKYSV+ SAADKL+EIC
Subjt:  MEKALRIYGGVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLQELFHRAYNHSVWVLNKYSVDPSAADKLREIC
A0A6P4A9N6 LYR motif-containing protein At3g195087.5e-3485.19Show/hide
Query:  MEKALRIYGGVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLQELFHRAYNHSVWVLNKYSVDPSAADKLREICF
        MEKALRIYG +LRLVRRLPKD+RPYYAKYARENFVNYREVDAND+ +L+ELFHRAYNHS+WVLNKYSVD SAADKL+E+C+
Subjt:  MEKALRIYGGVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLQELFHRAYNHSVWVLNKYSVDPSAADKLREICF
SwissProt top hitse value%identityAlignment
A9SNJ1 LYR motif-containing protein PHYPADRAFT_1868632.5e-1055.17Show/hide
Query:  YGGVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLQELFHRAYNHSVWVLNK
        Y  VL+LV+RLP  SR YYA+YARENFV Y EV+  D +S++ L  R ++H+ WVL K
Subjt:  YGGVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLQELFHRAYNHSVWVLNK
Q1G3M2 LYR motif-containing protein At3g195083.7e-3075.61Show/hide
Query:  MEKALRIYGGVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLQELFHRAYNHSVWVLNKYSVDPSAADKLREICFK
        M+K LR+YGGV+RLVR LP DSRPYYAKYARENFVNYREVD ++  SL ELF RAYNHS+WVL KYS+D SAA KL+EICF+
Subjt:  MEKALRIYGGVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLQELFHRAYNHSVWVLNKYSVDPSAADKLREICFK
Arabidopsis top hitse value%identityAlignment
AT3G19508.1 unknown protein2.6e-3175.61Show/hide
Query:  MEKALRIYGGVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLQELFHRAYNHSVWVLNKYSVDPSAADKLREICFK
        M+K LR+YGGV+RLVR LP DSRPYYAKYARENFVNYREVD ++  SL ELF RAYNHS+WVL KYS+D SAA KL+EICF+
Subjt:  MEKALRIYGGVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLQELFHRAYNHSVWVLNKYSVDPSAADKLREICFK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGGCGCTGAGAATATACGGCGGAGTTCTGCGGCTGGTGCGGCGGTTACCTAAGGATTCCAGGCCTTACTACGCCAAATACGCTCGAGAGAATTTCGTCAACTA
CAGAGAAGTCGATGCGAACGATGCCAAATCTCTTCAAGAACTCTTCCACAGAGCCTACAATCACTCCGTTTGGGTTCTCAACAAGTATTCGGTGGATCCATCCGCGGCGG
ATAAGCTGAGGGAGATCTGTTTCAAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGGCGCTGAGAATATACGGCGGAGTTCTGCGGCTGGTGCGGCGGTTACCTAAGGATTCCAGGCCTTACTACGCCAAATACGCTCGAGAGAATTTCGTCAACTA
CAGAGAAGTCGATGCGAACGATGCCAAATCTCTTCAAGAACTCTTCCACAGAGCCTACAATCACTCCGTTTGGGTTCTCAACAAGTATTCGGTGGATCCATCCGCGGCGG
ATAAGCTGAGGGAGATCTGTTTCAAA
Protein sequenceShow/hide protein sequence
MEKALRIYGGVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLQELFHRAYNHSVWVLNKYSVDPSAADKLREICFK