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MS012446 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012446
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionD-3-phosphoglycerate dehydrogenase
Genome locationscaffold63:724762..725148
RNA-Seq ExpressionMS012446
SyntenyMS012446
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EHA8591349.1 putative D-3-phosphoglycerate dehydrogenase [Cocos nucifera]1.2e-1141.41Show/hide
Query:  MLSGSHGVGSGSVHHQATMLSSGGQIHIVNANTSPPNDLQPPSRGFKHFAADLSPTPHNKRIAERDLGAELLRAQIIRAIDISEFLEEINTCFTKLLRN
        ML  S+ V  G +H++ TML  GG+I +V+AN    +  +  + G +  AADL     N+ I +RDLGAELL A++I A+D+ E LE++ T   +LLR+
Subjt:  MLSGSHGVGSGSVHHQATMLSSGGQIHIVNANTSPPNDLQPPSRGFKHFAADLSPTPHNKRIAERDLGAELLRAQIIRAIDISEFLEEINTCFTKLLRN

KYP75325.1 hypothetical protein KK1_008046, partial [Cajanus cajan]8.4e-1840.32Show/hide
Query:  TSFSRRIGLSNISGHCSQKRNSMLSGSHGVGSGSVHHQATMLSSGGQIHIVNANTSPPNDLQPPSRGFKHFAADLSPTPHNKRIAERDLGAELLRAQIIR
        TS   R+GLS++SGH  ++R+++L G  GVG GS++ QA ML  GG+I +++++    NDL+    G +  A DL     ++ +AERDL AELL A+++ 
Subjt:  TSFSRRIGLSNISGHCSQKRNSMLSGSHGVGSGSVHHQATMLSSGGQIHIVNANTSPPNDLQPPSRGFKHFAADLSPTPHNKRIAERDLGAELLRAQIIR

Query:  AIDISEFLEEINTCFTKLLRNKNR
        AI + E LE++     +LLR+++R
Subjt:  AIDISEFLEEINTCFTKLLRNKNR

NP_001117302.1 hypothetical protein AT1G17744 [Arabidopsis thaliana]2.3e-1537.21Show/hide
Query:  KRRTSFSRRIGLSNISGHCSQKRNSMLSGSHGVGSGSVHHQATMLSSGGQIHIVNANTSPPNDLQPPSRGFKHFAADLSPTPHNKRIAERDLGAELLRAQ
        + RT F+R +GLSN++ H S++ NSM   SH +   S++HQ  +L    QI+IVN N+   +  QPP R  KHF    S   H++ +  R    ++ R +
Subjt:  KRRTSFSRRIGLSNISGHCSQKRNSMLSGSHGVGSGSVHHQATMLSSGGQIHIVNANTSPPNDLQPPSRGFKHFAADLSPTPHNKRIAERDLGAELLRAQ

Query:  IIRAIDISEFLEEINTCFTKLLRNKNRRL
        I+RA++++EF EEI+  F++ L +++ RL
Subjt:  IIRAIDISEFLEEINTCFTKLLRNKNRRL

RDX79026.1 hypothetical protein CR513_40599, partial [Mucuna pruriens]2.0e-1941.32Show/hide
Query:  RIGLSNISGHCSQKRNSMLSGSHGVGSGSVHHQATMLSSGGQIHIVNANTSPPNDLQPPSRGFKHFAADLSPTPHNKRIAERDLGAELLRAQIIRAIDIS
        R+GL ++ GH  ++R+ +L G  GVGSG +  QA ML  GGQI +++++     DL+P   G +  A DL    H++R+AERDL AE L  +++ AI + 
Subjt:  RIGLSNISGHCSQKRNSMLSGSHGVGSGSVHHQATMLSSGGQIHIVNANTSPPNDLQPPSRGFKHFAADLSPTPHNKRIAERDLGAELLRAQIIRAIDIS

Query:  EFLEEINTCFTKLLRNKNRRL
        E L+++  CF +LLR+++RRL
Subjt:  EFLEEINTCFTKLLRNKNRRL

THU72335.1 hypothetical protein C4D60_Mb04t11010 [Musa balbisiana]6.7e-1536.43Show/hide
Query:  KRRTSFSRRIGLSNISGHCSQKRNSMLSGSHGVGSGSVHHQATMLSSGGQIHIVNANTSPPNDLQPPSRGFKHFAADLSPTPHNKRIAERDLGAELLRAQ
        K +T F   +   ++SGH  ++ + M    H V  G V ++A MLS GG++HIV+ +   P+D +P + G +  AADL   PH++ +AERDLG ELL  +
Subjt:  KRRTSFSRRIGLSNISGHCSQKRNSMLSGSHGVGSGSVHHQATMLSSGGQIHIVNANTSPPNDLQPPSRGFKHFAADLSPTPHNKRIAERDLGAELLRAQ

Query:  IIRAIDISEFLEEINTCFTKLLRNKNRRL
        ++ A+D+ E LEE+     + L +++  L
Subjt:  IIRAIDISEFLEEINTCFTKLLRNKNRRL

TrEMBL top hitse value%identityAlignment
A0A151U7N4 Uncharacterized protein (Fragment)4.1e-1840.32Show/hide
Query:  TSFSRRIGLSNISGHCSQKRNSMLSGSHGVGSGSVHHQATMLSSGGQIHIVNANTSPPNDLQPPSRGFKHFAADLSPTPHNKRIAERDLGAELLRAQIIR
        TS   R+GLS++SGH  ++R+++L G  GVG GS++ QA ML  GG+I +++++    NDL+    G +  A DL     ++ +AERDL AELL A+++ 
Subjt:  TSFSRRIGLSNISGHCSQKRNSMLSGSHGVGSGSVHHQATMLSSGGQIHIVNANTSPPNDLQPPSRGFKHFAADLSPTPHNKRIAERDLGAELLRAQIIR

Query:  AIDISEFLEEINTCFTKLLRNKNR
        AI + E LE++     +LLR+++R
Subjt:  AIDISEFLEEINTCFTKLLRNKNR

A0A371FL44 Uncharacterized protein (Fragment)9.7e-2041.32Show/hide
Query:  RIGLSNISGHCSQKRNSMLSGSHGVGSGSVHHQATMLSSGGQIHIVNANTSPPNDLQPPSRGFKHFAADLSPTPHNKRIAERDLGAELLRAQIIRAIDIS
        R+GL ++ GH  ++R+ +L G  GVGSG +  QA ML  GGQI +++++     DL+P   G +  A DL    H++R+AERDL AE L  +++ AI + 
Subjt:  RIGLSNISGHCSQKRNSMLSGSHGVGSGSVHHQATMLSSGGQIHIVNANTSPPNDLQPPSRGFKHFAADLSPTPHNKRIAERDLGAELLRAQIIRAIDIS

Query:  EFLEEINTCFTKLLRNKNRRL
        E L+++  CF +LLR+++RRL
Subjt:  EFLEEINTCFTKLLRNKNRRL

A0A4V4H9N8 Uncharacterized protein3.2e-1536.43Show/hide
Query:  KRRTSFSRRIGLSNISGHCSQKRNSMLSGSHGVGSGSVHHQATMLSSGGQIHIVNANTSPPNDLQPPSRGFKHFAADLSPTPHNKRIAERDLGAELLRAQ
        K +T F   +   ++SGH  ++ + M    H V  G V ++A MLS GG++HIV+ +   P+D +P + G +  AADL   PH++ +AERDLG ELL  +
Subjt:  KRRTSFSRRIGLSNISGHCSQKRNSMLSGSHGVGSGSVHHQATMLSSGGQIHIVNANTSPPNDLQPPSRGFKHFAADLSPTPHNKRIAERDLGAELLRAQ

Query:  IIRAIDISEFLEEINTCFTKLLRNKNRRL
        ++ A+D+ E LEE+     + L +++  L
Subjt:  IIRAIDISEFLEEINTCFTKLLRNKNRRL

A0A654EC97 Uncharacterized protein1.1e-1537.21Show/hide
Query:  KRRTSFSRRIGLSNISGHCSQKRNSMLSGSHGVGSGSVHHQATMLSSGGQIHIVNANTSPPNDLQPPSRGFKHFAADLSPTPHNKRIAERDLGAELLRAQ
        + RT F+R +GLSN++ H S++ NSM   SH +   S++HQ  +L    QI+IVN N+   +  QPP R  KHF    S   H++ +  R    ++ R +
Subjt:  KRRTSFSRRIGLSNISGHCSQKRNSMLSGSHGVGSGSVHHQATMLSSGGQIHIVNANTSPPNDLQPPSRGFKHFAADLSPTPHNKRIAERDLGAELLRAQ

Query:  IIRAIDISEFLEEINTCFTKLLRNKNRRL
        I+RA++++EF EEI+  F++ L +++ RL
Subjt:  IIRAIDISEFLEEINTCFTKLLRNKNRRL

Q94AG7 Uncharacterized protein At1g177401.1e-1537.21Show/hide
Query:  KRRTSFSRRIGLSNISGHCSQKRNSMLSGSHGVGSGSVHHQATMLSSGGQIHIVNANTSPPNDLQPPSRGFKHFAADLSPTPHNKRIAERDLGAELLRAQ
        + RT F+R +GLSN++ H S++ NSM   SH +   S++HQ  +L    QI+IVN N+   +  QPP R  KHF    S   H++ +  R    ++ R +
Subjt:  KRRTSFSRRIGLSNISGHCSQKRNSMLSGSHGVGSGSVHHQATMLSSGGQIHIVNANTSPPNDLQPPSRGFKHFAADLSPTPHNKRIAERDLGAELLRAQ

Query:  IIRAIDISEFLEEINTCFTKLLRNKNRRL
        I+RA++++EF EEI+  F++ L +++ RL
Subjt:  IIRAIDISEFLEEINTCFTKLLRNKNRRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G17744.1 unknown protein2.1e-1937.21Show/hide
Query:  KRRTSFSRRIGLSNISGHCSQKRNSMLSGSHGVGSGSVHHQATMLSSGGQIHIVNANTSPPNDLQPPSRGFKHFAADLSPTPHNKRIAERDLGAELLRAQ
        + RT F+R +GLSN++ H S++ NSM   SH +   S++HQ  +L    QI+IVN N+   +  QPP R  KHF    S   H++ +  R    ++ R +
Subjt:  KRRTSFSRRIGLSNISGHCSQKRNSMLSGSHGVGSGSVHHQATMLSSGGQIHIVNANTSPPNDLQPPSRGFKHFAADLSPTPHNKRIAERDLGAELLRAQ

Query:  IIRAIDISEFLEEINTCFTKLLRNKNRRL
        I+RA++++EF EEI+  F++ L +++ RL
Subjt:  IIRAIDISEFLEEINTCFTKLLRNKNRRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAAGACGTACCAGCTTTAGTAGACGCATCGGCTTGAGCAACATTTCTGGCCATTGCAGTCAAAAGCGCAATTCCATGCTCAGCGGCAGCCACGGTGTTGGCAGTGGGAG
CGTTCACCACCAAGCAACCATGCTCAGTAGCGGCGGCCAGATCCACATTGTCAATGCCAACACCAGCCCTCCCAACGACCTTCAACCTCCCTCCAGAGGATTCAAACACT
TCGCGGCTGACCTTAGTCCCACTCCGCACAATAAGCGCATCGCAGAGCGAGATCTTGGTGCAGAGCTCCTCAGGGCTCAAATTATACGAGCAATCGACATTAGCGAATTC
CTTGAGGAGATCAATACCTGCTTCACCAAGCTTCTCCGCAACAAGAACCGTCGGCTT
mRNA sequenceShow/hide mRNA sequence
AAAAGACGTACCAGCTTTAGTAGACGCATCGGCTTGAGCAACATTTCTGGCCATTGCAGTCAAAAGCGCAATTCCATGCTCAGCGGCAGCCACGGTGTTGGCAGTGGGAG
CGTTCACCACCAAGCAACCATGCTCAGTAGCGGCGGCCAGATCCACATTGTCAATGCCAACACCAGCCCTCCCAACGACCTTCAACCTCCCTCCAGAGGATTCAAACACT
TCGCGGCTGACCTTAGTCCCACTCCGCACAATAAGCGCATCGCAGAGCGAGATCTTGGTGCAGAGCTCCTCAGGGCTCAAATTATACGAGCAATCGACATTAGCGAATTC
CTTGAGGAGATCAATACCTGCTTCACCAAGCTTCTCCGCAACAAGAACCGTCGGCTT
Protein sequenceShow/hide protein sequence
KRRTSFSRRIGLSNISGHCSQKRNSMLSGSHGVGSGSVHHQATMLSSGGQIHIVNANTSPPNDLQPPSRGFKHFAADLSPTPHNKRIAERDLGAELLRAQIIRAIDISEF
LEEINTCFTKLLRNKNRRL