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MS012461 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012461
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionEKC/KEOPS complex subunit TPRKB
Genome locationscaffold63:878588..879529
RNA-Seq ExpressionMS012461
SyntenyMS012461
Gene Ontology termsGO:0000722 - telomere maintenance via recombination (biological process)
GO:0002949 - tRNA threonylcarbamoyladenosine modification (biological process)
GO:0000408 - EKC/KEOPS complex (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0005829 - cytosol (cellular component)
InterPro domainsIPR013926 - CGI121/TPRKB
IPR036504 - CGI121/TPRKB superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008456125.1 PREDICTED: EKC/KEOPS complex subunit Tprkb [Cucumis melo]4.8e-6382.72Show/hide
Query:  RELLDSMQAGTLEPEVAFLNASLIPDVFPVLASAYKTLVSKSRDSLTTRTPHSELVYNYSGSKHITESLKRCGISDNSSYVLAARFNASPAEVGFRSCET
        +ELLDSMQAGTLEPEVAFLNASLIPDVFPVLA+A+KTLVSKSR SLTTRT HSELVYNYSGSKHITESL+RCGISD+SSYVLAA FN SP EV       
Subjt:  RELLDSMQAGTLEPEVAFLNASLIPDVFPVLASAYKTLVSKSRDSLTTRTPHSELVYNYSGSKHITESLKRCGISDNSSYVLAARFNASPAEVGFRSCET

Query:  KLSYLMEAVEKLVHGKEISLEELGERADQAKIQKHFKITGPELTISSVGDAITCRIAARDAL
              +A+EKLVHGKEI+LEELGERADQA+IQKHFKITGPELT+SSVGDAITCRIAARDAL
Subjt:  KLSYLMEAVEKLVHGKEISLEELGERADQAKIQKHFKITGPELTISSVGDAITCRIAARDAL

XP_022149131.1 EKC/KEOPS complex subunit TPRKB [Momordica charantia]1.1e-7090.74Show/hide
Query:  RELLDSMQAGTLEPEVAFLNASLIPDVFPVLASAYKTLVSKSRDSLTTRTPHSELVYNYSGSKHITESLKRCGISDNSSYVLAARFNASPAEVGFRSCET
        +ELLDSMQAGTLEPEVAFLNASLIPDVFPVLASAYKTLVSKSRDSLTTRTPHSELVYNYSGSKHITESLKRCGISDNSSYVLAARFNASPAE        
Subjt:  RELLDSMQAGTLEPEVAFLNASLIPDVFPVLASAYKTLVSKSRDSLTTRTPHSELVYNYSGSKHITESLKRCGISDNSSYVLAARFNASPAEVGFRSCET

Query:  KLSYLMEAVEKLVHGKEISLEELGERADQAKIQKHFKITGPELTISSVGDAITCRIAARDAL
             MEAVEKLVHGKEISLEELGERADQAKIQKHFKITGPELT+SSVGDAITCRIAARDAL
Subjt:  KLSYLMEAVEKLVHGKEISLEELGERADQAKIQKHFKITGPELTISSVGDAITCRIAARDAL

XP_022941609.1 EKC/KEOPS complex subunit Tprkb isoform X1 [Cucurbita moschata]3.7e-6382.72Show/hide
Query:  RELLDSMQAGTLEPEVAFLNASLIPDVFPVLASAYKTLVSKSRDSLTTRTPHSELVYNYSGSKHITESLKRCGISDNSSYVLAARFNASPAEVGFRSCET
        +ELLD+MQA TLEPEVAFLNASLIPDVFPVLA+AYKTL+SKSRDSLTTRT HSELVYNYSGSKHITESLKRCGISD+SSYVLAARFNASP E        
Subjt:  RELLDSMQAGTLEPEVAFLNASLIPDVFPVLASAYKTLVSKSRDSLTTRTPHSELVYNYSGSKHITESLKRCGISDNSSYVLAARFNASPAEVGFRSCET

Query:  KLSYLMEAVEKLVHGKEISLEELGERADQAKIQKHFKITGPELTISSVGDAITCRIAARDAL
              +A+EKLVHG+EI+LEELG RADQA IQKHFKITGPELTISSVGDAITCRIAARDAL
Subjt:  KLSYLMEAVEKLVHGKEISLEELGERADQAKIQKHFKITGPELTISSVGDAITCRIAARDAL

XP_023524844.1 EKC/KEOPS complex subunit Tprkb isoform X1 [Cucurbita pepo subsp. pepo]7.5e-6483.33Show/hide
Query:  RELLDSMQAGTLEPEVAFLNASLIPDVFPVLASAYKTLVSKSRDSLTTRTPHSELVYNYSGSKHITESLKRCGISDNSSYVLAARFNASPAEVGFRSCET
        +ELLD+MQAGTLEPEVAFLNASLIPDVFPVLA+AYKTL+SKSRDSLTTRT HSELVYNYSGSKHITESLKRCGISD+SSYVLAARFNASP E        
Subjt:  RELLDSMQAGTLEPEVAFLNASLIPDVFPVLASAYKTLVSKSRDSLTTRTPHSELVYNYSGSKHITESLKRCGISDNSSYVLAARFNASPAEVGFRSCET

Query:  KLSYLMEAVEKLVHGKEISLEELGERADQAKIQKHFKITGPELTISSVGDAITCRIAARDAL
              +A+EKLVHG+EI+LEELG RADQA IQKHFKITGPELTISSVGDAITCRIAARDAL
Subjt:  KLSYLMEAVEKLVHGKEISLEELGERADQAKIQKHFKITGPELTISSVGDAITCRIAARDAL

XP_038898952.1 EKC/KEOPS complex subunit TPRKB [Benincasa hispida]6.8e-6584.57Show/hide
Query:  RELLDSMQAGTLEPEVAFLNASLIPDVFPVLASAYKTLVSKSRDSLTTRTPHSELVYNYSGSKHITESLKRCGISDNSSYVLAARFNASPAEVGFRSCET
        +ELLDSMQAGTLEPEVAFLNASLIPDVFPVLA+AYKTLVSKSRDSLTTRT HSELVYNYSGSKHITESLKRCGISD+SSYVLAA FNASP E        
Subjt:  RELLDSMQAGTLEPEVAFLNASLIPDVFPVLASAYKTLVSKSRDSLTTRTPHSELVYNYSGSKHITESLKRCGISDNSSYVLAARFNASPAEVGFRSCET

Query:  KLSYLMEAVEKLVHGKEISLEELGERADQAKIQKHFKITGPELTISSVGDAITCRIAARDAL
             M+A+EKLVHG EI+LEELGERADQA+IQKHFKITGPELT+SSVGDAITCRIAARDAL
Subjt:  KLSYLMEAVEKLVHGKEISLEELGERADQAKIQKHFKITGPELTISSVGDAITCRIAARDAL

TrEMBL top hitse value%identityAlignment
A0A1S3C2H5 EKC/KEOPS complex subunit Tprkb2.3e-6382.72Show/hide
Query:  RELLDSMQAGTLEPEVAFLNASLIPDVFPVLASAYKTLVSKSRDSLTTRTPHSELVYNYSGSKHITESLKRCGISDNSSYVLAARFNASPAEVGFRSCET
        +ELLDSMQAGTLEPEVAFLNASLIPDVFPVLA+A+KTLVSKSR SLTTRT HSELVYNYSGSKHITESL+RCGISD+SSYVLAA FN SP EV       
Subjt:  RELLDSMQAGTLEPEVAFLNASLIPDVFPVLASAYKTLVSKSRDSLTTRTPHSELVYNYSGSKHITESLKRCGISDNSSYVLAARFNASPAEVGFRSCET

Query:  KLSYLMEAVEKLVHGKEISLEELGERADQAKIQKHFKITGPELTISSVGDAITCRIAARDAL
              +A+EKLVHGKEI+LEELGERADQA+IQKHFKITGPELT+SSVGDAITCRIAARDAL
Subjt:  KLSYLMEAVEKLVHGKEISLEELGERADQAKIQKHFKITGPELTISSVGDAITCRIAARDAL

A0A5D3DQY2 EKC/KEOPS complex subunit Tprkb2.3e-6382.72Show/hide
Query:  RELLDSMQAGTLEPEVAFLNASLIPDVFPVLASAYKTLVSKSRDSLTTRTPHSELVYNYSGSKHITESLKRCGISDNSSYVLAARFNASPAEVGFRSCET
        +ELLDSMQAGTLEPEVAFLNASLIPDVFPVLA+A+KTLVSKSR SLTTRT HSELVYNYSGSKHITESL+RCGISD+SSYVLAA FN SP EV       
Subjt:  RELLDSMQAGTLEPEVAFLNASLIPDVFPVLASAYKTLVSKSRDSLTTRTPHSELVYNYSGSKHITESLKRCGISDNSSYVLAARFNASPAEVGFRSCET

Query:  KLSYLMEAVEKLVHGKEISLEELGERADQAKIQKHFKITGPELTISSVGDAITCRIAARDAL
              +A+EKLVHGKEI+LEELGERADQA+IQKHFKITGPELT+SSVGDAITCRIAARDAL
Subjt:  KLSYLMEAVEKLVHGKEISLEELGERADQAKIQKHFKITGPELTISSVGDAITCRIAARDAL

A0A6J1D7F7 EKC/KEOPS complex subunit TPRKB5.2e-7190.74Show/hide
Query:  RELLDSMQAGTLEPEVAFLNASLIPDVFPVLASAYKTLVSKSRDSLTTRTPHSELVYNYSGSKHITESLKRCGISDNSSYVLAARFNASPAEVGFRSCET
        +ELLDSMQAGTLEPEVAFLNASLIPDVFPVLASAYKTLVSKSRDSLTTRTPHSELVYNYSGSKHITESLKRCGISDNSSYVLAARFNASPAE        
Subjt:  RELLDSMQAGTLEPEVAFLNASLIPDVFPVLASAYKTLVSKSRDSLTTRTPHSELVYNYSGSKHITESLKRCGISDNSSYVLAARFNASPAEVGFRSCET

Query:  KLSYLMEAVEKLVHGKEISLEELGERADQAKIQKHFKITGPELTISSVGDAITCRIAARDAL
             MEAVEKLVHGKEISLEELGERADQAKIQKHFKITGPELT+SSVGDAITCRIAARDAL
Subjt:  KLSYLMEAVEKLVHGKEISLEELGERADQAKIQKHFKITGPELTISSVGDAITCRIAARDAL

A0A6J1FNX6 EKC/KEOPS complex subunit Tprkb isoform X11.8e-6382.72Show/hide
Query:  RELLDSMQAGTLEPEVAFLNASLIPDVFPVLASAYKTLVSKSRDSLTTRTPHSELVYNYSGSKHITESLKRCGISDNSSYVLAARFNASPAEVGFRSCET
        +ELLD+MQA TLEPEVAFLNASLIPDVFPVLA+AYKTL+SKSRDSLTTRT HSELVYNYSGSKHITESLKRCGISD+SSYVLAARFNASP E        
Subjt:  RELLDSMQAGTLEPEVAFLNASLIPDVFPVLASAYKTLVSKSRDSLTTRTPHSELVYNYSGSKHITESLKRCGISDNSSYVLAARFNASPAEVGFRSCET

Query:  KLSYLMEAVEKLVHGKEISLEELGERADQAKIQKHFKITGPELTISSVGDAITCRIAARDAL
              +A+EKLVHG+EI+LEELG RADQA IQKHFKITGPELTISSVGDAITCRIAARDAL
Subjt:  KLSYLMEAVEKLVHGKEISLEELGERADQAKIQKHFKITGPELTISSVGDAITCRIAARDAL

A0A6J1IY73 EKC/KEOPS complex subunit Tprkb6.8e-6381.48Show/hide
Query:  RELLDSMQAGTLEPEVAFLNASLIPDVFPVLASAYKTLVSKSRDSLTTRTPHSELVYNYSGSKHITESLKRCGISDNSSYVLAARFNASPAEVGFRSCET
        +ELLD+MQAGTLEPEVAFLNASLIPDVFPVLA+AYKT +SKSRDSLTTRT HSELVYNYSGSKHITESLKRCGISD+SSYVLAARFNASP E        
Subjt:  RELLDSMQAGTLEPEVAFLNASLIPDVFPVLASAYKTLVSKSRDSLTTRTPHSELVYNYSGSKHITESLKRCGISDNSSYVLAARFNASPAEVGFRSCET

Query:  KLSYLMEAVEKLVHGKEISLEELGERADQAKIQKHFKITGPELTISSVGDAITCRIAARDAL
              +A+EKLVHG+EI+LEELG RADQA IQKHFKITGPELTISS+GD ITCRIAARDAL
Subjt:  KLSYLMEAVEKLVHGKEISLEELGERADQAKIQKHFKITGPELTISSVGDAITCRIAARDAL

SwissProt top hitse value%identityAlignment
A1CEY5 EKC/KEOPS complex subunit cgi1211.5e-0628.47Show/hide
Query:  LLDSMQAGTLEPEVAFLNASLIPDVFPVLASAYKTLVSKSRDSLTTRTPHSELVYNYSGSKHITESLKRCGISDNSSYVLAARFNASPAEVGFRSCETKL
        L   + +G  + E AF++AS++     VL++ ++ +       L +R  HSE+V++ S + +I ES ++ GI+D +  +L  + + +P ++   S     
Subjt:  LLDSMQAGTLEPEVAFLNASLIPDVFPVLASAYKTLVSKSRDSLTTRTPHSELVYNYSGSKHITESLKRCGISDNSSYVLAARFNASPAEVGFRSCETKL

Query:  SYLMEAVEKL-VHGKEISLEELGERADQAKIQKHFKI
         +L +++E L V   + SL E+G   D AKI+K +K+
Subjt:  SYLMEAVEKL-VHGKEISLEELGERADQAKIQKHFKI

F1QZ15 EKC/KEOPS complex subunit TPRKB4.5e-1129.17Show/hide
Query:  AFLNASLIPDVFPVLASAYKTLVSKSRDSLTTRTPHSELVYNYSGSKHITESLKRCGISDNSSYVLAARFNASPAEVGFRSCETKLSYLMEAVEKLVHGK
        A +N S++ D F +L +  K +       + TR+ +SE+++N S + +I+E+ KR GISD+ + V     +     +      +K           V G+
Subjt:  AFLNASLIPDVFPVLASAYKTLVSKSRDSLTTRTPHSELVYNYSGSKHITESLKRCGISDNSSYVLAARFNASPAEVGFRSCETKLSYLMEAVEKLVHGK

Query:  EISLEELGERADQAKIQKHFKITGPELTISSVGDAITCRIAARD
        +I + ++ E  D AKI+K +KIT  E    ++ DA+ CR+A +D
Subjt:  EISLEELGERADQAKIQKHFKITGPELTISSVGDAITCRIAARD

Q0C9R3 EKC/KEOPS complex subunit cgi1215.7e-0626.81Show/hide
Query:  LLDSMQAGTLEPEVAFLNASLIPDVFPVLASAYKTLVSKSRDSLTTRTPHSELVYNYSGSKHITESLKRCGISDNSSYVLAARFNASPAEVGFRSCETKL
        L   + +G  + E AF++AS++      L++ ++ +       L +R  HSE V+++S + +I +S +R GISD++  +L  + + +P      + E+  
Subjt:  LLDSMQAGTLEPEVAFLNASLIPDVFPVLASAYKTLVSKSRDSLTTRTPHSELVYNYSGSKHITESLKRCGISDNSSYVLAARFNASPAEVGFRSCETKL

Query:  SYLMEAVEKLVHGKEISL--EELGERADQAKIQKHFKI
        ++L ++VE    G  +    E L   +D AKI+K +K+
Subjt:  SYLMEAVEKLVHGKEISL--EELGERADQAKIQKHFKI

Q8QZZ7 EKC/KEOPS complex subunit Tprkb2.9e-1028.08Show/hide
Query:  AFLNASLIPDVFPVLASAYKTLVSKSRDSLTTRTPHSELVYNYSGSKHITESLKRCGISDNSSYVLAARFNASPAEVGFRSCETKLSYLMEAVEKLVHGK
        + +N ++I D F +L +A K +       + TRT  +E+++N S + +I+E+LK+ GIS+ ++ VL         +V             E +   V G+
Subjt:  AFLNASLIPDVFPVLASAYKTLVSKSRDSLTTRTPHSELVYNYSGSKHITESLKRCGISDNSSYVLAARFNASPAEVGFRSCETKLSYLMEAVEKLVHGK

Query:  EISLEELGERADQAKIQKHFKITGPELTISSVGDAITCRIAARDAL
        ++ LE L E    ++++K +K++  E  I ++ DAI CR++ +D L
Subjt:  EISLEELGERADQAKIQKHFKITGPELTISSVGDAITCRIAARDAL

Q9Y3C4 EKC/KEOPS complex subunit TPRKB5.8e-1128.77Show/hide
Query:  AFLNASLIPDVFPVLASAYKTLVSKSRDSLTTRTPHSELVYNYSGSKHITESLKRCGISDNSSYVLAARFNASPAEVGFRSCETKLSYLMEAVEKLVHGK
        + +N ++I D F +L +A K +       + TRT  +E+++N S + +I+E+LK+ GIS N + +L         ++          YL+  VE    G 
Subjt:  AFLNASLIPDVFPVLASAYKTLVSKSRDSLTTRTPHSELVYNYSGSKHITESLKRCGISDNSSYVLAARFNASPAEVGFRSCETKLSYLMEAVEKLVHGK

Query:  EISLEELGERADQAKIQKHFKITGPELTISSVGDAITCRIAARDAL
        ++SL+ L E  +  +++K +K++  E +I ++ DAI CR++ +D L
Subjt:  EISLEELGERADQAKIQKHFKITGPELTISSVGDAITCRIAARDAL

Arabidopsis top hitse value%identityAlignment
AT4G34412.1 CONTAINS InterPro DOMAIN/s: Kinase binding protein CGI-121 (InterPro:IPR013926); Has 275 Blast hits to 275 proteins in 139 species: Archae - 0; Bacteria - 5; Metazoa - 98; Fungi - 109; Plants - 42; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).5.7e-5468.52Show/hide
Query:  RELLDSMQAGTLEPEVAFLNASLIPDVFPVLASAYKTLVSKSRDSLTTRTPHSELVYNYSGSKHITESLKRCGISDNSSYVLAARFNASPAEVGFRSCET
        +ELL+SM  G+L+ EV+FLNASLIPD+FP+LA+A K L+SKSRDSL+TRT HSELVYNYSGSKHITESLKRCGIS+N++Y+LAARFNASP E        
Subjt:  RELLDSMQAGTLEPEVAFLNASLIPDVFPVLASAYKTLVSKSRDSLTTRTPHSELVYNYSGSKHITESLKRCGISDNSSYVLAARFNASPAEVGFRSCET

Query:  KLSYLMEAVEKLVHGKEISLEELGERADQAKIQKHFKITGPELTISSVGDAITCRIAARDAL
             ME V KL++GKEI LEEL   A+QA I KH+KIT  EL ISS+GDAI CRIAARDAL
Subjt:  KLSYLMEAVEKLVHGKEISLEELGERADQAKIQKHFKITGPELTISSVGDAITCRIAARDAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGGGAACTTCTTGATTCTATGCAAGCTGGAACTCTGGAGCCGGAAGTTGCATTTCTCAATGCCTCTCTTATCCCAGATGTTTTCCCGGTGCTCGCGTCTGCTTATAAGAC
ACTTGTATCTAAGTCGAGGGATTCTCTGACTACCCGCACCCCTCATTCAGAACTAGTCTACAATTATTCGGGTTCAAAGCATATTACAGAGTCTTTAAAAAGATGCGGAA
TTTCTGATAACTCCTCTTATGTCCTTGCGGCTCGTTTTAACGCTTCTCCTGCCGAGGTTGGATTTAGATCTTGTGAAACTAAATTATCTTACCTTATGGAAGCTGTTGAG
AAACTTGTACATGGTAAAGAGATCAGCTTAGAGGAGTTGGGAGAGAGAGCAGACCAAGCTAAGATTCAAAAGCATTTTAAGATCACCGGACCCGAGTTGACAATATCCTC
AGTTGGAGACGCTATAACATGTCGGATCGCTGCACGCGATGCCTTG
mRNA sequenceShow/hide mRNA sequence
AGGGAACTTCTTGATTCTATGCAAGCTGGAACTCTGGAGCCGGAAGTTGCATTTCTCAATGCCTCTCTTATCCCAGATGTTTTCCCGGTGCTCGCGTCTGCTTATAAGAC
ACTTGTATCTAAGTCGAGGGATTCTCTGACTACCCGCACCCCTCATTCAGAACTAGTCTACAATTATTCGGGTTCAAAGCATATTACAGAGTCTTTAAAAAGATGCGGAA
TTTCTGATAACTCCTCTTATGTCCTTGCGGCTCGTTTTAACGCTTCTCCTGCCGAGGTTGGATTTAGATCTTGTGAAACTAAATTATCTTACCTTATGGAAGCTGTTGAG
AAACTTGTACATGGTAAAGAGATCAGCTTAGAGGAGTTGGGAGAGAGAGCAGACCAAGCTAAGATTCAAAAGCATTTTAAGATCACCGGACCCGAGTTGACAATATCCTC
AGTTGGAGACGCTATAACATGTCGGATCGCTGCACGCGATGCCTTG
Protein sequenceShow/hide protein sequence
RELLDSMQAGTLEPEVAFLNASLIPDVFPVLASAYKTLVSKSRDSLTTRTPHSELVYNYSGSKHITESLKRCGISDNSSYVLAARFNASPAEVGFRSCETKLSYLMEAVE
KLVHGKEISLEELGERADQAKIQKHFKITGPELTISSVGDAITCRIAARDAL