CuGenDBv2

Gene ID	MS012472
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Pinin_SDK_memA domain-containing protein
Genome location	scaffold63:958178..961845
RNA-Seq Expression	MS012472
Synteny	MS012472
Gene Ontology terms	GO:0006397 - mRNA processing (biological process) GO:0008380 - RNA splicing (biological process) GO:0071013 - catalytic step 2 spliceosome (cellular component) GO:0003729 - mRNA binding (molecular function)
InterPro domains	IPR006786 - Pinin/SDK/MemA protein IPR039853 - Pinin

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6576962.1 Pinin, partial [Cucurbita argyrosperma subsp. sororia]

6.3e-203

89.93

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Query:  MGSNAAAADKTEEDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNFVPNGPRRGFLRPAERIDAEDQPPAKRRLSSAVVKMEEDGEINEEADGK
        MGSNAAA +KTEEDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNF  NGPRRGF+RPAER DAEDQPPAKRRLSSAVVKMEEDGEINEEA+GK
Subjt:  MGSNAAAADKTEEDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNFVPNGPRRGFLRPAERIDAEDQPPAKRRLSSAVVKMEEDGEINEEADGK

Query:  DAMKDTSREETSVSDTAYQNDGKQNHLRQSGSFNRVDGNKRVARMDFEVPAAEHIPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGSEAFMK
        DA+KDTS EETS SD AYQNDGKQ+HLRQS S  R+DGNKR ARMDF+VP AEH+PR+LPKNEDPSLVSRNKRMLGQLLGTLE+FRKEDKQLSG+EAFM+
Subjt:  DAMKDTSREETSVSDTAYQNDGKQNHLRQSGSFNRVDGNKRVARMDFEVPAAEHIPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGSEAFMK

Query:  RSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKLSNFIRTKTEPSIHYLPNKPLDEDATLVEQRKEEAFA
        R+DSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKL NFIRTKTEPSI+YLPNKPLD+DAT  EQR+EEAF 
Subjt:  RSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKLSNFIRTKTEPSIHYLPNKPLDEDATLVEQRKEEAFA

Query:  EWKASRREELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNNEDEDDVEDINAGEDDMIDDVLGVE
        EWKASR EELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNNEDEDDVEDIN GEDDMIDDVLGVE
Subjt:  EWKASRREELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNNEDEDDVEDINAGEDDMIDDVLGVE

Query:  DNGRRGEEAAKPEADGGASPNADNTVQ
        DNGRRGEE  KPEAD  +   ADNTV+
Subjt:  DNGRRGEEAAKPEADGGASPNADNTVQ

XP_022149257.1 pinin [Momordica charantia]

9.0e-226

99.3

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Query:  MGSNAAAADKTEEDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNFVPNGPRRGFLRPAERIDAEDQPPAKRRLSSAVVKMEEDGEINEEADGK
        MGSNAAAADK EEDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPR+FVPNGPRRGFLRPAERIDAEDQPPAKRRLSSAVVKMEEDGEINEEADGK
Subjt:  MGSNAAAADKTEEDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNFVPNGPRRGFLRPAERIDAEDQPPAKRRLSSAVVKMEEDGEINEEADGK

Query:  DAMKDTSREETSVSDTAYQNDGKQNHLRQSGSFNRVDGNKRVARMDFEVPAAEHIPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGSEAFMK
        DAMKDTSREETSVSDTAYQNDGKQNHLRQSGSFNRVDGNKR ARMDFEVPAAEHIPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGSEAFMK
Subjt:  DAMKDTSREETSVSDTAYQNDGKQNHLRQSGSFNRVDGNKRVARMDFEVPAAEHIPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGSEAFMK

Query:  RSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKLSNFIRTKTEPSIHYLPNKPLDEDATLVEQRKEEAFA
        RSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKLSNFIRTKTEPSIHYLPNKPLDEDATLVEQRKEEAFA
Subjt:  RSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKLSNFIRTKTEPSIHYLPNKPLDEDATLVEQRKEEAFA

Query:  EWKASRREELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNNEDEDDVEDINAGEDDMIDDVLGVE
        EWKASRREELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNNEDEDDVEDINAGEDDMIDDVLGVE
Subjt:  EWKASRREELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNNEDEDDVEDINAGEDDMIDDVLGVE

Query:  DNGRRGEEAAKPEADGGASPNADNTVQ
        DNGRRGEEAAKPEADGGASPNADNTVQ
Subjt:  DNGRRGEEAAKPEADGGASPNADNTVQ

XP_022922936.1 pinin [Cucurbita moschata]

2.2e-203

90.16

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Query:  MGSNAAAADKTEEDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNFVPNGPRRGFLRPAERIDAEDQPPAKRRLSSAVVKMEEDGEINEEADGK
        MGSNAAA +KTEEDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNF  NGPRRGF+RPAER DAEDQPPAKRRLSSAVVKMEEDGEINEEA+GK
Subjt:  MGSNAAAADKTEEDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNFVPNGPRRGFLRPAERIDAEDQPPAKRRLSSAVVKMEEDGEINEEADGK

Query:  DAMKDTSREETSVSDTAYQNDGKQNHLRQSGSFNRVDGNKRVARMDFEVPAAEHIPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGSEAFMK
        DA+KDTS EETS SD AYQNDGKQ+HLRQS S  R+DGNKR ARMDF+VP AEH+PR+LPKNEDPSLVSRNKRMLGQLLGTLE+FRKEDKQLSG+EAFM+
Subjt:  DAMKDTSREETSVSDTAYQNDGKQNHLRQSGSFNRVDGNKRVARMDFEVPAAEHIPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGSEAFMK

Query:  RSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKLSNFIRTKTEPSIHYLPNKPLDEDATLVEQRKEEAFA
        R+DSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKL NFIRTKTEPSI+YLPNKPLD+DAT  EQR+EEAF 
Subjt:  RSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKLSNFIRTKTEPSIHYLPNKPLDEDATLVEQRKEEAFA

Query:  EWKASRREELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNNEDEDDVEDINAGEDDMIDDVLGVE
        EWKASR EELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNNEDEDDVEDIN GEDDMIDDVLGVE
Subjt:  EWKASRREELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNNEDEDDVEDINAGEDDMIDDVLGVE

Query:  DNGRRGEEAAKPEADGGASPNADNTVQ
        DNGRRGEE AKPEAD  +   ADNTV+
Subjt:  DNGRRGEEAAKPEADGGASPNADNTVQ

XP_022984792.1 pinin [Cucurbita maxima]

1.7e-203

90.4

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Query:  MGSNAAAADKTEEDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNFVPNGPRRGFLRPAERIDAEDQPPAKRRLSSAVVKMEEDGEINEEADGK
        MGSNAAA +KTEEDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNF  NGPRRGF+RPAER DAEDQPPAKRRLSSAVVKMEEDGEINEEA+GK
Subjt:  MGSNAAAADKTEEDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNFVPNGPRRGFLRPAERIDAEDQPPAKRRLSSAVVKMEEDGEINEEADGK

Query:  DAMKDTSREETSVSDTAYQNDGKQNHLRQSGSFNRVDGNKRVARMDFEVPAAEHIPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGSEAFMK
        DA+KDTS EETS SD AYQNDGKQ+HLRQS S  R+DGNKR ARMDFEVP AEH+PRVLPKNEDPSLVSRNKRMLGQLLGTLE+FRKEDKQLSG+EAFM+
Subjt:  DAMKDTSREETSVSDTAYQNDGKQNHLRQSGSFNRVDGNKRVARMDFEVPAAEHIPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGSEAFMK

Query:  RSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKLSNFIRTKTEPSIHYLPNKPLDEDATLVEQRKEEAFA
        R+DSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKL NF RTKTEPSI+YLPNKPLD+DATL EQR+EEAF 
Subjt:  RSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKLSNFIRTKTEPSIHYLPNKPLDEDATLVEQRKEEAFA

Query:  EWKASRREELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNNEDEDDVEDINAGEDDMIDDVLGVE
        EWKASR EELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNNEDEDDVEDIN GEDDMIDDVLGVE
Subjt:  EWKASRREELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNNEDEDDVEDINAGEDDMIDDVLGVE

Query:  DNGRRGEEAAKPEADGGASPNADNTVQ
        DNGRRGEE AKPEAD  +   A+NTV+
Subjt:  DNGRRGEEAAKPEADGGASPNADNTVQ

XP_038902762.1 pinin [Benincasa hispida]

8.8e-205

91.57

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Query:  MGSNAAAADKTEEDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNFVPNGPRRGFLRPAERIDAEDQPPAKRRLSSAVVKMEEDGEINEEADGK
        MG+NAAA +KTE+DLRKEIDELQRQQREITERLRDPRGLRR GF GPGPRNF  NGPRRGF+RP ER DAEDQPPAKRRLSSAVVKMEEDGEINEEA+GK
Subjt:  MGSNAAAADKTEEDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNFVPNGPRRGFLRPAERIDAEDQPPAKRRLSSAVVKMEEDGEINEEADGK

Query:  DAMKDTSREETSVSDTAYQNDGKQNHLRQSGSFNRVDGNKRVARMDFEVPAAEHIPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGSEAFMK
        DAMKDTSREETS SDTA+QND KQNHLRQSGSF R+DGN+R ARMDFEVPAAE++PR+LPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSG+EAFM+
Subjt:  DAMKDTSREETSVSDTAYQNDGKQNHLRQSGSFNRVDGNKRVARMDFEVPAAEHIPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGSEAFMK

Query:  RSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKLSNFIRTKTEPSIHYLPNKPLDEDATLVEQRKEEAFA
        RSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKL NFIRTKTEPSI+YLPNKPLDEDATL EQR++EAF 
Subjt:  RSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKLSNFIRTKTEPSIHYLPNKPLDEDATLVEQRKEEAFA

Query:  EWKASRREELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNNEDEDDVEDINAGEDDMIDDVLGVE
        EWK SRREELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNNEDEDDVEDIN GEDDMIDDVLGVE
Subjt:  EWKASRREELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNNEDEDDVEDINAGEDDMIDDVLGVE

Query:  DNGRRGEEAAKPEADGGASPNADNTVQ
        DNGRRGEE AKPEAD  ASP ADNTVQ
Subjt:  DNGRRGEEAAKPEADGGASPNADNTVQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L734 Pinin_SDK_memA domain-containing protein

9.2e-200

89.23

Show/hide

Query:  MGSNAAAADKTEEDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNFVPNGPRRGFLRPAERIDAEDQPPAKRRLSSAVVKMEEDGEINEEADGK
        MG+NAA  +KTE+DLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNF  NGPRRGF+RP ER DAEDQPPAKRRLSSAVVKM EDGEINEEA+GK
Subjt:  MGSNAAAADKTEEDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNFVPNGPRRGFLRPAERIDAEDQPPAKRRLSSAVVKMEEDGEINEEADGK

Query:  DAMKDTSREETSVSDTAYQNDGKQNHLRQSGSFNRVDGNKRVARMDFEVPAAEHIPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGSEAFMK
        DA+KDTSREETS SD  +QND +QNHLRQSGSF R+DGNKR ARMD ++PAAE++PR+LPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSG+EAFM+
Subjt:  DAMKDTSREETSVSDTAYQNDGKQNHLRQSGSFNRVDGNKRVARMDFEVPAAEHIPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGSEAFMK

Query:  RSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKLSNFIRTKTEPSIHYLPNKPLDEDATLVEQRKEEAFA
        RSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKL NFIRTKTEPSI+YLPNKPLDEDATL EQ+++EAF 
Subjt:  RSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKLSNFIRTKTEPSIHYLPNKPLDEDATLVEQRKEEAFA

Query:  EWKASRREELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNNEDEDDVEDINAGEDDMIDDVLGVE
        EWKASRREELSEYQKQIGEQYIANVEKDLERWQNARRARKG+NDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNNEDEDDVEDIN GEDDMIDDVL VE
Subjt:  EWKASRREELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNNEDEDDVEDINAGEDDMIDDVLGVE

Query:  DNGRRGEEAAKPEADGGASPNADNTVQ
        +NGRRGEE AKPEAD  ASP AD+TVQ
Subjt:  DNGRRGEEAAKPEADGGASPNADNTVQ

A0A1S4E1Q0 pinin

6.0e-199

88.99

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Query:  MGSNAAAADKTEEDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNFVPNGPRRGFLRPAERIDAEDQPPAKRRLSSAVVKMEEDGEINEEADGK
        MG+  A  +KTE+DLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNF  NGPRRGF+RP ER DAEDQPPAKRRLSSAVVKM EDGEINEEA+GK
Subjt:  MGSNAAAADKTEEDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNFVPNGPRRGFLRPAERIDAEDQPPAKRRLSSAVVKMEEDGEINEEADGK

Query:  DAMKDTSREETSVSDTAYQNDGKQNHLRQSGSFNRVDGNKRVARMDFEVPAAEHIPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGSEAFMK
        DAMKDTSREETS SD  +QND +QNHLRQSGSF R+DGNKR ARMD ++PAAE++PR+LPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSG+EAFM+
Subjt:  DAMKDTSREETSVSDTAYQNDGKQNHLRQSGSFNRVDGNKRVARMDFEVPAAEHIPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGSEAFMK

Query:  RSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKLSNFIRTKTEPSIHYLPNKPLDEDATLVEQRKEEAFA
        RSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKL NFIRTKTEPSI+YLPNKPLDEDATL EQ+++EAF 
Subjt:  RSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKLSNFIRTKTEPSIHYLPNKPLDEDATLVEQRKEEAFA

Query:  EWKASRREELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNNEDEDDVEDINAGEDDMIDDVLGVE
        EWKASRREELSEYQKQIGEQYIANVEKDLERWQNARRARKG+NDVSNLQETMDKELDTHRLEHGPKKR IPGGSNNEDEDDVEDIN GEDDMIDDVL VE
Subjt:  EWKASRREELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNNEDEDDVEDINAGEDDMIDDVLGVE

Query:  DNGRRGEEAAKPEADGGASPNADNTVQ
        DNGRRGEE AKPEAD  ASP AD+TVQ
Subjt:  DNGRRGEEAAKPEADGGASPNADNTVQ

A0A6J1D7F9 pinin

4.4e-226

99.3

Show/hide

Query:  MGSNAAAADKTEEDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNFVPNGPRRGFLRPAERIDAEDQPPAKRRLSSAVVKMEEDGEINEEADGK
        MGSNAAAADK EEDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPR+FVPNGPRRGFLRPAERIDAEDQPPAKRRLSSAVVKMEEDGEINEEADGK
Subjt:  MGSNAAAADKTEEDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNFVPNGPRRGFLRPAERIDAEDQPPAKRRLSSAVVKMEEDGEINEEADGK

Query:  DAMKDTSREETSVSDTAYQNDGKQNHLRQSGSFNRVDGNKRVARMDFEVPAAEHIPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGSEAFMK
        DAMKDTSREETSVSDTAYQNDGKQNHLRQSGSFNRVDGNKR ARMDFEVPAAEHIPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGSEAFMK
Subjt:  DAMKDTSREETSVSDTAYQNDGKQNHLRQSGSFNRVDGNKRVARMDFEVPAAEHIPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGSEAFMK

Query:  RSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKLSNFIRTKTEPSIHYLPNKPLDEDATLVEQRKEEAFA
        RSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKLSNFIRTKTEPSIHYLPNKPLDEDATLVEQRKEEAFA
Subjt:  RSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKLSNFIRTKTEPSIHYLPNKPLDEDATLVEQRKEEAFA

Query:  EWKASRREELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNNEDEDDVEDINAGEDDMIDDVLGVE
        EWKASRREELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNNEDEDDVEDINAGEDDMIDDVLGVE
Subjt:  EWKASRREELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNNEDEDDVEDINAGEDDMIDDVLGVE

Query:  DNGRRGEEAAKPEADGGASPNADNTVQ
        DNGRRGEEAAKPEADGGASPNADNTVQ
Subjt:  DNGRRGEEAAKPEADGGASPNADNTVQ

A0A6J1E5H2 pinin

1.0e-203

90.16

Show/hide

Query:  MGSNAAAADKTEEDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNFVPNGPRRGFLRPAERIDAEDQPPAKRRLSSAVVKMEEDGEINEEADGK
        MGSNAAA +KTEEDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNF  NGPRRGF+RPAER DAEDQPPAKRRLSSAVVKMEEDGEINEEA+GK
Subjt:  MGSNAAAADKTEEDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNFVPNGPRRGFLRPAERIDAEDQPPAKRRLSSAVVKMEEDGEINEEADGK

Query:  DAMKDTSREETSVSDTAYQNDGKQNHLRQSGSFNRVDGNKRVARMDFEVPAAEHIPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGSEAFMK
        DA+KDTS EETS SD AYQNDGKQ+HLRQS S  R+DGNKR ARMDF+VP AEH+PR+LPKNEDPSLVSRNKRMLGQLLGTLE+FRKEDKQLSG+EAFM+
Subjt:  DAMKDTSREETSVSDTAYQNDGKQNHLRQSGSFNRVDGNKRVARMDFEVPAAEHIPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGSEAFMK

Query:  RSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKLSNFIRTKTEPSIHYLPNKPLDEDATLVEQRKEEAFA
        R+DSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKL NFIRTKTEPSI+YLPNKPLD+DAT  EQR+EEAF 
Subjt:  RSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKLSNFIRTKTEPSIHYLPNKPLDEDATLVEQRKEEAFA

Query:  EWKASRREELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNNEDEDDVEDINAGEDDMIDDVLGVE
        EWKASR EELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNNEDEDDVEDIN GEDDMIDDVLGVE
Subjt:  EWKASRREELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNNEDEDDVEDINAGEDDMIDDVLGVE

Query:  DNGRRGEEAAKPEADGGASPNADNTVQ
        DNGRRGEE AKPEAD  +   ADNTV+
Subjt:  DNGRRGEEAAKPEADGGASPNADNTVQ

A0A6J1J351 pinin

8.0e-204

90.4

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Query:  MGSNAAAADKTEEDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNFVPNGPRRGFLRPAERIDAEDQPPAKRRLSSAVVKMEEDGEINEEADGK
        MGSNAAA +KTEEDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNF  NGPRRGF+RPAER DAEDQPPAKRRLSSAVVKMEEDGEINEEA+GK
Subjt:  MGSNAAAADKTEEDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNFVPNGPRRGFLRPAERIDAEDQPPAKRRLSSAVVKMEEDGEINEEADGK

Query:  DAMKDTSREETSVSDTAYQNDGKQNHLRQSGSFNRVDGNKRVARMDFEVPAAEHIPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGSEAFMK
        DA+KDTS EETS SD AYQNDGKQ+HLRQS S  R+DGNKR ARMDFEVP AEH+PRVLPKNEDPSLVSRNKRMLGQLLGTLE+FRKEDKQLSG+EAFM+
Subjt:  DAMKDTSREETSVSDTAYQNDGKQNHLRQSGSFNRVDGNKRVARMDFEVPAAEHIPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGSEAFMK

Query:  RSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKLSNFIRTKTEPSIHYLPNKPLDEDATLVEQRKEEAFA
        R+DSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKL NF RTKTEPSI+YLPNKPLD+DATL EQR+EEAF 
Subjt:  RSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKLSNFIRTKTEPSIHYLPNKPLDEDATLVEQRKEEAFA

Query:  EWKASRREELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNNEDEDDVEDINAGEDDMIDDVLGVE
        EWKASR EELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNNEDEDDVEDIN GEDDMIDDVLGVE
Subjt:  EWKASRREELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNNEDEDDVEDINAGEDDMIDDVLGVE

Query:  DNGRRGEEAAKPEADGGASPNADNTVQ
        DNGRRGEE AKPEAD  +   A+NTV+
Subjt:  DNGRRGEEAAKPEADGGASPNADNTVQ

SwissProt top hits

e value

%identity

Alignment

O35691 Pinin

2.8e-04

26.41

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Query:  AAAADKTEEDLRKEIDELQRQQREITERL-RDPRGLR-----------RGGFPGPGPRNFVPNGPRRGFLRPAERIDAEDQPPAKRR-LSSAVVKMEEDG
        A A    +E L K  + L+     I +   RDP  +R            GG  G G         RRGF       D+   PPAK+R L  AV ++    
Subjt:  AAAADKTEEDLRKEIDELQRQQREITERL-RDPRGLR-----------RGGFPGPGPRNFVPNGPRRGFLRPAERIDAEDQPPAKRR-LSSAVVKMEEDG

Query:  EINEEADGKDAMKDTSREETSVSDTAYQNDGKQNHLRQSGSFNRVDGNKRVARMDFEVPAAEHIPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQ
               G+   +  SR+E+   D    +D K+  L+ S     V    +    D           +  +N D     RN+R+ G L+GTL+KF++E   
Subjt:  EINEEADGKDAMKDTSREETSVSDTAYQNDGKQNHLRQSGSFNRVDGNKRVARMDFEVPAAEHIPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQ

Query:  LSGSEAFMKRSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLR--WSEHHKKLSNFIRTKTEPSIHYLPNKPLDEDAT
           +E   +R +  Q+ E +A EE +++  + RE   E+R +   LR        E+K+EL  L+  W+EH+ K+  +IRTKT+P + Y+P +       
Subjt:  LSGSEAFMKRSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLR--WSEHHKKLSNFIRTKTEPSIHYLPNKPLDEDAT

Query:  LVE--QRKEEAFAEWKASRREELSEY------------QKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSN
        L+E  QRK  A  E    RR E +E              K+   Q + N E+  E+ +     R+       L+ET ++  D    E G ++    G  +
Subjt:  LVE--QRKEEAFAEWKASRREELSEY------------QKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSN

Query:  NEDEDDVED
        ++ E + E+
Subjt:  NEDEDDVED

Q5R5X0 Pinin

8.2e-04

25.69

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Query:  AAAADKTEEDLRKEIDELQRQQREITERL-RDPRGLR-----------RGGFPGPGPRNFVPNGPRRGFLRPAERIDAEDQPPAKRR-LSSAVVKMEEDG
        A A    +E L K  + L+     I +   RDP  +R            GG  G G         RRGF       D+   PPAK+R L  AV ++    
Subjt:  AAAADKTEEDLRKEIDELQRQQREITERL-RDPRGLR-----------RGGFPGPGPRNFVPNGPRRGFLRPAERIDAEDQPPAKRR-LSSAVVKMEEDG

Query:  EINEEADGKDAMKDTSREETSVSDTAYQNDGKQNHLRQSGSFNRVDGNKRVARMDFEVPAAEHIPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQ
               G+   +  SR+E+   D    +D K+  L+ S     V  +K   R D           +  +N D     RN+R+ G L+GTL+KF++E   
Subjt:  EINEEADGKDAMKDTSREETSVSDTAYQNDGKQNHLRQSGSFNRVDGNKRVARMDFEVPAAEHIPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQ

Query:  LSGSEAFMKRSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLR--WSEHHKKLSNFIRTKTEPSIHYLPNKPLDEDAT
           +E   +R +  Q+ E +A EE +++  + RE   E+R +   LR        E+K+EL  L+  W+EH+ K+  +IRTKT+P + Y+P +       
Subjt:  LSGSEAFMKRSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLR--WSEHHKKLSNFIRTKTEPSIHYLPNKPLDEDAT

Query:  LVE--QRKEEAFAEWK-------------ASRREELSEYQKQI--GEQYIANVE--KDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNI
        L+E  QRK  A  E +               RR+ + E + Q+   E+  A  E  K  +R +        +NDV  ++E  ++E     + H   ++  
Subjt:  LVE--QRKEEAFAEWK-------------ASRREELSEYQKQI--GEQYIANVE--KDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNI

Query:  PGGSNN-------EDEDDVEDINAGEDDMIDDVLGV
                     E+E +V +    +D   ++V+ V
Subjt:  PGGSNN-------EDEDDVEDINAGEDDMIDDVLGV

Q9H307 Pinin

8.2e-04

25.69

Show/hide

Query:  AAAADKTEEDLRKEIDELQRQQREITERL-RDPRGLR-----------RGGFPGPGPRNFVPNGPRRGFLRPAERIDAEDQPPAKRR-LSSAVVKMEEDG
        A A    +E L K  + L+     I +   RDP  +R            GG  G G         RRGF       D+   PPAK+R L  AV ++    
Subjt:  AAAADKTEEDLRKEIDELQRQQREITERL-RDPRGLR-----------RGGFPGPGPRNFVPNGPRRGFLRPAERIDAEDQPPAKRR-LSSAVVKMEEDG

Query:  EINEEADGKDAMKDTSREETSVSDTAYQNDGKQNHLRQSGSFNRVDGNKRVARMDFEVPAAEHIPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQ
               G+   +  SR+E+   D    +D K+  L+ S     V  +K   R D           +  +N D     RN+R+ G L+GTL+KF++E   
Subjt:  EINEEADGKDAMKDTSREETSVSDTAYQNDGKQNHLRQSGSFNRVDGNKRVARMDFEVPAAEHIPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQ

Query:  LSGSEAFMKRSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLR--WSEHHKKLSNFIRTKTEPSIHYLPNKPLDEDAT
           +E   +R +  Q+ E +A EE +++  + RE   E+R +   LR        E+K+EL  L+  W+EH+ K+  +IRTKT+P + Y+P +       
Subjt:  LSGSEAFMKRSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLR--WSEHHKKLSNFIRTKTEPSIHYLPNKPLDEDAT

Query:  LVE--QRKEEAFAEWK-------------ASRREELSEYQKQI--GEQYIANVE--KDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNI
        L+E  QRK  A  E +               RR+ + E + Q+   E+  A  E  K  +R +        +NDV  ++E  ++E     + H   ++  
Subjt:  LVE--QRKEEAFAEWK-------------ASRREELSEYQKQI--GEQYIANVE--KDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNI

Query:  PGGSNN-------EDEDDVEDINAGEDDMIDDVLGV
                     E+E +V +    +D   ++V+ V
Subjt:  PGGSNN-------EDEDDVEDINAGEDDMIDDVLGV

Arabidopsis top hits

e value

%identity

Alignment

AT1G15200.1 protein-protein interaction regulator family protein

1.7e-121

62.95

Show/hide

Query:  AADKTEEDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNFVPNGPRRGFLRPAERIDAEDQPPAKRRLSSAVVKME-----EDGEINEEADGKD
        A +KT E+LR EIDEL RQQREITERLRDPRGLRRGGF    PR    N  RRGF RPAER D ED+PPAKRRLSSAVVK++     +DGE   + +G  
Subjt:  AADKTEEDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNFVPNGPRRGFLRPAERIDAEDQPPAKRRLSSAVVKME-----EDGEINEEADGKD

Query:  AMKDTSREETSVSDTAYQNDGKQNHLRQSGSFNRVDGNKRVARMDFEVPA-AEHIPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGSEAFMK
             ++ +   + T+ Q+D KQ+ L + GS+++ D  +R     +E  A  E  PRVLPKNEDP LV+RN+RMLG LLGTLEKFRKEDKQ SG++A+ +
Subjt:  AMKDTSREETSVSDTAYQNDGKQNHLRQSGSFNRVDGNKRVARMDFEVPA-AEHIPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGSEAFMK

Query:  RSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKLSNFIRTKTEPSIHYLPNKPLDEDATLVEQRKEEAFA
        R+ +LQRAE++AREESERLR QERE + EKR+RDL LRARVAAKAE+KKLELLFL+WSEH KKLSNFIRTK EP I+Y P KPL+ED + VEQ+KE  F 
Subjt:  RSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKLSNFIRTKTEPSIHYLPNKPLDEDATLVEQRKEEAFA

Query:  EWKASRREELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGG--SNNEDEDDVEDINAGEDDMI-DDVL
        EWKA+RR+E+SEYQK+I EQ + NVEK+LERWQNAR+ARK NN+  NLQETMDKEL+THR+EHGPKKR IPGG   + ++ED+VEDIN GED+MI DD+L
Subjt:  EWKASRREELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGG--SNNEDEDDVEDINAGEDDMI-DDVL

Query:  GVEDNGRRGEEAA
            +G   EE A
Subjt:  GVEDNGRRGEEAA

AT1G15200.2 protein-protein interaction regulator family protein

1.2e-119

62.2

Show/hide

Query:  AADKTEEDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNFVPNGPRRGFLRPAERIDAEDQPPAKRRLSSAVVKME-----EDGEINEEADGKD
        A +KT E+LR EIDEL RQQREITERLRDPRGLRRGGF    PR    N  RRGF RPAER D ED+PPAKRRLSSAVVK++     +DGE   + +G  
Subjt:  AADKTEEDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNFVPNGPRRGFLRPAERIDAEDQPPAKRRLSSAVVKME-----EDGEINEEADGKD

Query:  AMKDTSREETSVSDTAYQNDGKQNHLRQSGSFNRVDGNKRVARMDFEVPA-AEHIPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGSEAFMK
             ++ +   + T+ Q+D KQ+ L + GS+++ D  +R     +E  A  E  PRVLPKNEDP LV+RN+RMLG LLGTLEKFRKEDKQ SG++A+ +
Subjt:  AMKDTSREETSVSDTAYQNDGKQNHLRQSGSFNRVDGNKRVARMDFEVPA-AEHIPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGSEAFMK

Query:  RSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKLSNFIR-----TKTEPSIHYLPNKPLDEDATLVEQRK
        R+ +LQRAE++AREESERLR QERE + EKR+RDL LRARVAAKAE+KKLELLFL+WSEH KKLSNFIR     TK EP I+Y P KPL+ED + VEQ+K
Subjt:  RSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKLSNFIR-----TKTEPSIHYLPNKPLDEDATLVEQRK

Query:  EEAFAEWKASRREELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGG--SNNEDEDDVEDINAGEDDMI
        E  F EWKA+RR+E+SEYQK+I EQ + NVEK+LERWQNAR+ARK NN+  NLQETMDKEL+THR+EHGPKKR IPGG   + ++ED+VEDIN GED+MI
Subjt:  EEAFAEWKASRREELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGG--SNNEDEDDVEDINAGEDDMI

Query:  -DDVLGVEDNGRRGEEAA
         DD+L    +G   EE A
Subjt:  -DDVLGVEDNGRRGEEAA

AT1G15200.3 protein-protein interaction regulator family protein

9.0e-115

56.52

Show/hide

Query:  AADKTEEDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNFVPNGPRRGFLRPAERIDAEDQPPAKRRLSSAVVKME-----EDGEINEEADGKD
        A +KT E+LR EIDEL RQQREITERLRDPRGLRRGGF    PR    N  RRGF RPAER D ED+PPAKRRLSSAVVK++     +DGE   + +G  
Subjt:  AADKTEEDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNFVPNGPRRGFLRPAERIDAEDQPPAKRRLSSAVVKME-----EDGEINEEADGKD

Query:  AMKDTSREETSVSDTAYQNDGKQNHLRQSGSFNRVDGNKRVARMDFEVPA-AEHIPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGSEAFMK
             ++ +   + T+ Q+D KQ+ L + GS+++ D  +R     +E  A  E  PRVLPKNEDP LV+RN+RMLG LLGTLEKFRKEDKQ SG++A+ +
Subjt:  AMKDTSREETSVSDTAYQNDGKQNHLRQSGSFNRVDGNKRVARMDFEVPA-AEHIPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGSEAFMK

Query:  RSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKLSNFI--------------------------------
        R+ +LQRAE++AREESERLR QERE + EKR+RDL LRARVAAKAE+KKLELLFL+WSEH KKLSNFI                                
Subjt:  RSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKLSNFI--------------------------------

Query:  ---------------RTKTEPSIHYLPNKPLDEDATLVEQRKEEAFAEWKASRREELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMD
                       RTK EP I+Y P KPL+ED + VEQ+KE  F EWKA+RR+E+SEYQK+I EQ + NVEK+LERWQNAR+ARK NN+  NLQETMD
Subjt:  ---------------RTKTEPSIHYLPNKPLDEDATLVEQRKEEAFAEWKASRREELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMD

Query:  KELDTHRLEHGPKKRNIPGG--SNNEDEDDVEDINAGEDDMI-DDVLGVEDNGRRGEEAA
        KEL+THR+EHGPKKR IPGG   + ++ED+VEDIN GED+MI DD+L    +G   EE A
Subjt:  KELDTHRLEHGPKKRNIPGG--SNNEDEDDVEDINAGEDDMI-DDVLGVEDNGRRGEEAA

AT1G15200.4 protein-protein interaction regulator family protein

6.2e-108

55.11

Show/hide

Query:  AADKTEEDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNFVPNGPRRGFLRPAERIDAEDQPPAKRRLSSAVVKME-----EDGEINEEADGKD
        A +KT E+LR EIDEL RQQREITERLRDPRGLRRGGF    PR    N  RRGF RPAER D ED+PPAKRRLSSAVVK++     +DGE   + +G  
Subjt:  AADKTEEDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNFVPNGPRRGFLRPAERIDAEDQPPAKRRLSSAVVKME-----EDGEINEEADGKD

Query:  AMKDTSREETSVSDTAYQNDGKQNHLRQSGSFNRVDGNKRVARMDFEVPA-AEHIPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGSEAFMK
             ++ +   + T+ Q+D KQ+ L + GS+++ D  +R     +E  A  E  PRVLPKNEDP LV+RN+RMLG LLGTLEKFRKEDKQ SG++A+ +
Subjt:  AMKDTSREETSVSDTAYQNDGKQNHLRQSGSFNRVDGNKRVARMDFEVPA-AEHIPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGSEAFMK

Query:  RSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKLSNFI--------------------------------
        R+ +LQRAE++AREESERLR QERE + EKR+RDL LRARVAAKAE+KKLELLFL+WSEH KKLSNFI                                
Subjt:  RSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKLSNFI--------------------------------

Query:  ---------------RTKTEPSIHYLPNKPLDEDATLVEQRKEEAFAEWKASRREELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMD
                       RTK EP I+Y P KPL+ED + VEQ+KE  F EWKA+RR+E+SEYQK+I EQ + NVEK+LERWQNAR+ARK NN+  NLQETMD
Subjt:  ---------------RTKTEPSIHYLPNKPLDEDATLVEQRKEEAFAEWKASRREELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMD

Query:  KELDTHRLEHGPKKRNIPGGS------NNEDEDDVEDINAGEDDMIDDVL
        KEL+THR+EHGPKKR IPGG         E   D     A E+D+  +VL
Subjt:  KELDTHRLEHGPKKRNIPGGS------NNEDEDDVEDINAGEDDMIDDVL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGAAGTAACGCCGCCGCCGCCGATAAAACGGAGGAGGATCTCCGAAAGGAGATCGATGAGCTTCAACGTCAACAACGGGAGATTACAGAACGGCTTCGTGATCCTCG
CGGACTCCGGAGAGGGGGCTTTCCGGGACCTGGGCCGAGAAATTTCGTCCCTAATGGACCTCGTCGGGGATTTCTTCGACCTGCGGAAAGGATCGATGCTGAAGACCAGC
CTCCTGCTAAGCGGCGACTATCATCTGCTGTTGTTAAGATGGAGGAGGATGGGGAGATAAATGAAGAAGCCGATGGGAAGGATGCAATGAAGGATACATCACGGGAAGAA
ACTTCAGTGAGTGATACAGCCTACCAGAACGATGGGAAACAAAATCATTTGCGGCAGAGTGGTTCATTTAATAGAGTGGATGGAAATAAAAGAGTAGCTAGGATGGATTT
CGAAGTTCCAGCTGCAGAGCACATTCCAAGGGTGCTGCCTAAGAATGAGGATCCTAGCTTAGTTAGCAGGAACAAGAGAATGCTGGGTCAGCTTTTGGGAACATTAGAGA
AATTCAGGAAAGAAGATAAGCAACTTTCAGGAAGTGAAGCTTTCATGAAAAGATCTGATTCCTTGCAAAGAGCTGAGCAAAGAGCACGAGAGGAAAGTGAAAGATTGAGG
CAACAAGAGCGTGAGCAAATTGCAGAAAAACGGAAAAGAGATCTGATGCTCAGAGCTCGCGTGGCTGCCAAGGCAGAAGAGAAGAAGTTGGAATTACTTTTTCTTCGATG
GAGCGAGCACCATAAGAAACTTAGCAATTTTATAAGGACAAAGACTGAACCTTCAATTCATTACTTGCCAAATAAACCATTGGACGAGGATGCAACCTTGGTTGAGCAGC
GAAAAGAGGAGGCTTTTGCGGAATGGAAAGCCTCCAGAAGGGAGGAGTTATCCGAATATCAGAAACAGATTGGAGAACAGTATATTGCAAATGTCGAGAAAGACTTGGAG
AGGTGGCAGAATGCAAGGAGAGCAAGAAAAGGAAATAATGATGTATCAAATTTGCAGGAAACCATGGACAAAGAATTGGACACCCATAGACTTGAGCATGGTCCCAAGAA
AAGGAACATCCCAGGTGGTAGCAACAATGAGGACGAGGACGATGTGGAAGATATTAACGCTGGAGAAGACGACATGATAGACGACGTACTTGGTGTCGAAGATAATGGAC
GCAGAGGCGAGGAAGCAGCGAAACCCGAAGCTGATGGCGGCGCGAGCCCCAATGCTGATAATACTGTGCAG

mRNA sequence

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Protein sequence

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MGSNAAAADKTEEDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNFVPNGPRRGFLRPAERIDAEDQPPAKRRLSSAVVKMEEDGEINEEADGKDAMKDTSREE
TSVSDTAYQNDGKQNHLRQSGSFNRVDGNKRVARMDFEVPAAEHIPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLSGSEAFMKRSDSLQRAEQRAREESERLR
QQEREQIAEKRKRDLMLRARVAAKAEEKKLELLFLRWSEHHKKLSNFIRTKTEPSIHYLPNKPLDEDATLVEQRKEEAFAEWKASRREELSEYQKQIGEQYIANVEKDLE
RWQNARRARKGNNDVSNLQETMDKELDTHRLEHGPKKRNIPGGSNNEDEDDVEDINAGEDDMIDDVLGVEDNGRRGEEAAKPEADGGASPNADNTVQ

MS012472 (gene) of Bitter gourd (TR) v1 genome