; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS012476 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012476
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTubby-like F-box protein 8
Genome locationscaffold63:984138..984272
RNA-Seq ExpressionMS012476
SyntenyMS012476
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039114.1 Tubby-like F-box protein 8 [Cucumis melo var. makuwa]1.1e-0473.91Show/hide
Query:  MEKAVVVTTAAIFCFLLLSA-ATVTVSADAADCIDGCFTACVQRDS
        MEK+     AAI C LLLSA A VTVSADAADCID CFTACVQ+DS
Subjt:  MEKAVVVTTAAIFCFLLLSA-ATVTVSADAADCIDGCFTACVQRDS

KAE8650509.1 hypothetical protein Csa_010751 [Cucumis sativus]1.9e-0478.95Show/hide
Query:  TTAAIFCFLLLSAATVTVSADAADCIDGCFTACVQRDS
        +  AI C LLLS A VTVSADAADCIDGCFTACVQ+DS
Subjt:  TTAAIFCFLLLSAATVTVSADAADCIDGCFTACVQRDS

KAG6600340.1 hypothetical protein SDJN03_05573, partial [Cucurbita argyrosperma subsp. sororia]6.1e-0873.33Show/hide
Query:  MEKAVVVTTAAIFCFLLLSAATVTVSADAADCIDGCFTACVQRDS
        M+K+   TT AI CF+LLSAA  TVSADAADCIDGCFTACVQ+D+
Subjt:  MEKAVVVTTAAIFCFLLLSAATVTVSADAADCIDGCFTACVQRDS

XP_008456107.1 PREDICTED: uncharacterized protein LOC103496144 isoform X2 [Cucumis melo]2.4e-0471.74Show/hide
Query:  MEKAVVVTTAAIFCFLLLSA-ATVTVSADAADCIDGCFTACVQRDS
        MEK+     AAI C LLLSA A VTVSADAADCID CFTACVQ+D+
Subjt:  MEKAVVVTTAAIFCFLLLSA-ATVTVSADAADCIDGCFTACVQRDS

XP_016901882.1 PREDICTED: uncharacterized protein LOC103496144 isoform X1 [Cucumis melo]2.4e-0471.74Show/hide
Query:  MEKAVVVTTAAIFCFLLLSA-ATVTVSADAADCIDGCFTACVQRDS
        MEK+     AAI C LLLSA A VTVSADAADCID CFTACVQ+D+
Subjt:  MEKAVVVTTAAIFCFLLLSA-ATVTVSADAADCIDGCFTACVQRDS

TrEMBL top hitse value%identityAlignment
A0A0A0LC00 Uncharacterized protein9.0e-0578.95Show/hide
Query:  TTAAIFCFLLLSAATVTVSADAADCIDGCFTACVQRDS
        +  AI C LLLS A VTVSADAADCIDGCFTACVQ+DS
Subjt:  TTAAIFCFLLLSAATVTVSADAADCIDGCFTACVQRDS

A0A1S3C2J8 uncharacterized protein LOC103496144 isoform X21.2e-0471.74Show/hide
Query:  MEKAVVVTTAAIFCFLLLSA-ATVTVSADAADCIDGCFTACVQRDS
        MEK+     AAI C LLLSA A VTVSADAADCID CFTACVQ+D+
Subjt:  MEKAVVVTTAAIFCFLLLSA-ATVTVSADAADCIDGCFTACVQRDS

A0A1S4E0W4 uncharacterized protein LOC103496144 isoform X11.2e-0471.74Show/hide
Query:  MEKAVVVTTAAIFCFLLLSA-ATVTVSADAADCIDGCFTACVQRDS
        MEK+     AAI C LLLSA A VTVSADAADCID CFTACVQ+D+
Subjt:  MEKAVVVTTAAIFCFLLLSA-ATVTVSADAADCIDGCFTACVQRDS

A0A5A7T6K1 Tubby-like F-box protein 85.3e-0573.91Show/hide
Query:  MEKAVVVTTAAIFCFLLLSA-ATVTVSADAADCIDGCFTACVQRDS
        MEK+     AAI C LLLSA A VTVSADAADCID CFTACVQ+DS
Subjt:  MEKAVVVTTAAIFCFLLLSA-ATVTVSADAADCIDGCFTACVQRDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAAGCTGTGGTGGTGACCACGGCGGCGATTTTCTGCTTCCTACTGCTTTCTGCGGCCACGGTGACCGTCTCCGCCGACGCTGCCGACTGCATCGACGGCTGCTT
CACCGCCTGTGTCCAGAGAGACAGT
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAAGCTGTGGTGGTGACCACGGCGGCGATTTTCTGCTTCCTACTGCTTTCTGCGGCCACGGTGACCGTCTCCGCCGACGCTGCCGACTGCATCGACGGCTGCTT
CACCGCCTGTGTCCAGAGAGACAGT
Protein sequenceShow/hide protein sequence
MEKAVVVTTAAIFCFLLLSAATVTVSADAADCIDGCFTACVQRDS