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MS012478 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012478
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCytochrome b-c1 complex subunit 6
Genome locationscaffold63:992188..993512
RNA-Seq ExpressionMS012478
SyntenyMS012478
Gene Ontology termsGO:0006122 - mitochondrial electron transport, ubiquinol to cytochrome c (biological process)
GO:0005750 - mitochondrial respiratory chain complex III (cellular component)
GO:0016491 - oxidoreductase activity (molecular function)
InterPro domainsIPR003422 - Cytochrome b-c1 complex, subunit 6
IPR023184 - Ubiquinol-cytochrome C reductase hinge domain
IPR036811 - Ubiquinol-cytochrome C reductase hinge domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650514.1 hypothetical protein Csa_011326 [Cucumis sativus]4.8e-2896.67Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWFCIDKCVS
        ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYW CIDKCV+
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWFCIDKCVS

XP_004140689.1 cytochrome b-c1 complex subunit 6 [Cucumis sativus]4.8e-2896.67Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWFCIDKCVS
        ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYW CIDKCV+
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWFCIDKCVS

XP_008456103.1 PREDICTED: cytochrome b-c1 complex subunit 6 [Cucumis melo]4.8e-2896.67Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWFCIDKCVS
        ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYW CIDKCV+
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWFCIDKCVS

XP_022149318.1 cytochrome b-c1 complex subunit 6 [Momordica charantia]5.7e-2998.33Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWFCIDKCVS
        ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWFCIDKCV+
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWFCIDKCVS

XP_022983580.1 cytochrome b-c1 complex subunit 6-like [Cucurbita maxima]6.3e-2895Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWFCIDKCVS
        ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYW C+DKCV+
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWFCIDKCVS

TrEMBL top hitse value%identityAlignment
A0A0A0L6I2 UCR_hinge domain-containing protein2.3e-2896.67Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWFCIDKCVS
        ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYW CIDKCV+
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWFCIDKCVS

A0A1S3C350 Cytochrome b-c1 complex subunit 62.3e-2896.67Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWFCIDKCVS
        ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYW CIDKCV+
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWFCIDKCVS

A0A6J1D6H2 Cytochrome b-c1 complex subunit 62.7e-2998.33Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWFCIDKCVS
        ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWFCIDKCV+
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWFCIDKCVS

A0A6J1FRR8 cytochrome b-c1 complex subunit 6-like3.0e-2895Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWFCIDKCVS
        ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYW C+DKCV+
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWFCIDKCVS

A0A6J1J694 Cytochrome b-c1 complex subunit 63.0e-2895Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWFCIDKCVS
        ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYW C+DKCV+
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWFCIDKCVS

SwissProt top hitse value%identityAlignment
P48504 Cytochrome b-c1 complex subunit 61.1e-2273.33Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWFCIDKCVS
        +DEE VD K  LE +CKPKCV+ L EYQAC KR++GD+SGHKHCTGQYFDYW CIDKCV+
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWFCIDKCVS

Q0WWE3 Cytochrome b-c1 complex subunit 6-1, mitochondrial5.0e-2888.33Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWFCIDKCVS
        AD+E VD K+YLEE+CKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYW CIDKCV+
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWFCIDKCVS

Q9SJV7 Cytochrome b-c1 complex subunit 6-2, mitochondrial3.2e-2783.33Show/hide
Query:  DEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWFCIDKCVSI
        +E+ VDQKRY EE+CKPKCVKPLLEYQACVKRIQ D+SGHKHCTGQYFDYW C+DKCVS+
Subjt:  DEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWFCIDKCVSI

Arabidopsis top hitse value%identityAlignment
AT1G15120.1 Ubiquinol-cytochrome C reductase hinge protein3.5e-2988.33Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWFCIDKCVS
        AD+E VD K+YLEE+CKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYW CIDKCV+
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWFCIDKCVS

AT1G15120.2 Ubiquinol-cytochrome C reductase hinge protein1.8e-2889.66Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWFCIDKC
        AD+E VD K+YLEE+CKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYW CIDKC
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWFCIDKC

AT2G01090.1 Ubiquinol-cytochrome C reductase hinge protein2.3e-2883.33Show/hide
Query:  DEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWFCIDKCVSI
        +E+ VDQKRY EE+CKPKCVKPLLEYQACVKRIQ D+SGHKHCTGQYFDYW C+DKCVS+
Subjt:  DEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWFCIDKCVSI

AT2G01090.2 Ubiquinol-cytochrome C reductase hinge protein2.3e-2883.33Show/hide
Query:  DEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWFCIDKCVSI
        +E+ VDQKRY EE+CKPKCVKPLLEYQACVKRIQ D+SGHKHCTGQYFDYW C+DKCVS+
Subjt:  DEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWFCIDKCVSI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGGGCTGATGAGGAACCTGTTGATCAGAAAAGGTATCTCGAAGAAGCTTGCAAGCCCAAGTGCGTGAAACCACTACTTGAATATCAGGCGTGCGTGAAGAGAATCCAAGG
GGATGACAGTGGTCACAAGCATTGCACTGGACAGTATTTCGATTACTGGTTTTGCATCGACAAATGTGTAAGTATTTTTTGGGTTTCACAAAGAAGT
mRNA sequenceShow/hide mRNA sequence
AGGGCTGATGAGGAACCTGTTGATCAGAAAAGGTATCTCGAAGAAGCTTGCAAGCCCAAGTGCGTGAAACCACTACTTGAATATCAGGCGTGCGTGAAGAGAATCCAAGG
GGATGACAGTGGTCACAAGCATTGCACTGGACAGTATTTCGATTACTGGTTTTGCATCGACAAATGTGTAAGTATTTTTTGGGTTTCACAAAGAAGT
Protein sequenceShow/hide protein sequence
RADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWFCIDKCVSIFWVSQRS