CuGenDBv2

Gene ID	MS012492
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Maternal effect embryo arrest 9
Genome location	scaffold63:1088577..1089017
RNA-Seq Expression	MS012492
Synteny	MS012492
Gene Ontology terms	GO:0009555 - pollen development (biological process) GO:0009793 - embryo development ending in seed dormancy (biological process) GO:0009506 - plasmodesma (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6600354.1 hypothetical protein SDJN03_05587, partial [Cucurbita argyrosperma subsp. sororia]

5.4e-61

89.8

Show/hide

Query:  MEALISQFTFLSDQALQDKNFDPSTIEDLMKLFEIEAYKSWAAVELHQQEETRDAEISMQQAEDYLDSVMDDAMDEFRRFEEEFDRMAEAELADLVAKSE
        MEALISQFTFLSD+ALQDKNFDPSTIEDLMKLFEIEAY SWAA+EL  Q ETRDAEI+MQQAED+LDSVM+DAMDEFR+FEEEFDRMAEAEL DLV KSE
Subjt:  MEALISQFTFLSDQALQDKNFDPSTIEDLMKLFEIEAYKSWAAVELHQQEETRDAEISMQQAEDYLDSVMDDAMDEFRRFEEEFDRMAEAELADLVAKSE

Query:  KARKMGSLMEKAAAIASKRYMEAAMNSATASMKSAWKTISSNKVHPS
        KARKMGSLMEKAAA+ASKRYMEAAMNSATASM+SAWK ISSNKVHPS
Subjt:  KARKMGSLMEKAAAIASKRYMEAAMNSATASMKSAWKTISSNKVHPS

KAG7031013.1 hypothetical protein SDJN02_05052, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.2e-60

89.12

Show/hide

Query:  MEALISQFTFLSDQALQDKNFDPSTIEDLMKLFEIEAYKSWAAVELHQQEETRDAEISMQQAEDYLDSVMDDAMDEFRRFEEEFDRMAEAELADLVAKSE
        MEALISQFTFLSD+ALQDKNFDPSTIEDLMKLFEIEAY SWAA+EL  Q ETRDAEI+MQQAED+LDSVM+DAMDEFR+FEEEFDRMAEAEL DLV KSE
Subjt:  MEALISQFTFLSDQALQDKNFDPSTIEDLMKLFEIEAYKSWAAVELHQQEETRDAEISMQQAEDYLDSVMDDAMDEFRRFEEEFDRMAEAELADLVAKSE

Query:  KARKMGSLMEKAAAIASKRYMEAAMNSATASMKSAWKTISSNKVHPS
        KARK+GSLMEKAAA+ASKRYMEAAMNSATASM+SAWK ISSNKVHPS
Subjt:  KARKMGSLMEKAAAIASKRYMEAAMNSATASMKSAWKTISSNKVHPS

XP_022149188.1 uncharacterized protein LOC111017674 [Momordica charantia]

3.8e-67

98.64

Show/hide

Query:  MEALISQFTFLSDQALQDKNFDPSTIEDLMKLFEIEAYKSWAAVELHQQEETRDAEISMQQAEDYLDSVMDDAMDEFRRFEEEFDRMAEAELADLVAKSE
        MEALISQFTFLSDQALQDKNFDPSTIE LMKLFEIEAYKSWAAVELHQQEETRDAEISMQQAEDYLDSVMDDAMDEFRRFEEEFDRMAEAELADLVAKSE
Subjt:  MEALISQFTFLSDQALQDKNFDPSTIEDLMKLFEIEAYKSWAAVELHQQEETRDAEISMQQAEDYLDSVMDDAMDEFRRFEEEFDRMAEAELADLVAKSE

Query:  KARKMGSLMEKAAAIASKRYMEAAMNSATASMKSAWKTISSNKVHPS
        KARKMG LMEKAAAIASKRYMEAAMNSATASMKSAWKTISSNKVHPS
Subjt:  KARKMGSLMEKAAAIASKRYMEAAMNSATASMKSAWKTISSNKVHPS

XP_022942791.1 uncharacterized protein LOC111447720 [Cucurbita moschata]

8.3e-62

90.48

Show/hide

Query:  MEALISQFTFLSDQALQDKNFDPSTIEDLMKLFEIEAYKSWAAVELHQQEETRDAEISMQQAEDYLDSVMDDAMDEFRRFEEEFDRMAEAELADLVAKSE
        MEALISQFTFLSD+ALQDKNFDPSTIEDLMKLFEIEAY SWAA+EL  Q ETRDAEI+MQQAEDYLDSVM+DAMDEFRRFEEEFDRMAEAEL DL+ KSE
Subjt:  MEALISQFTFLSDQALQDKNFDPSTIEDLMKLFEIEAYKSWAAVELHQQEETRDAEISMQQAEDYLDSVMDDAMDEFRRFEEEFDRMAEAELADLVAKSE

Query:  KARKMGSLMEKAAAIASKRYMEAAMNSATASMKSAWKTISSNKVHPS
        KARKMGSLMEKAAA+ASKRYMEAAMNSATASM+SAWK ISSNKVHPS
Subjt:  KARKMGSLMEKAAAIASKRYMEAAMNSATASMKSAWKTISSNKVHPS

XP_023533822.1 uncharacterized protein LOC111795549 isoform X2 [Cucurbita pepo subsp. pepo]

9.2e-61

89.8

Show/hide

Query:  MEALISQFTFLSDQALQDKNFDPSTIEDLMKLFEIEAYKSWAAVELHQQEETRDAEISMQQAEDYLDSVMDDAMDEFRRFEEEFDRMAEAELADLVAKSE
        MEALISQFTFLSD+ALQDKNFDPSTIEDLMKLFEIEAY SWAA+EL  Q E RDAEI+MQQAEDYLDSVM+DAMDEFRRFEEEFDRMAEAEL DLV KSE
Subjt:  MEALISQFTFLSDQALQDKNFDPSTIEDLMKLFEIEAYKSWAAVELHQQEETRDAEISMQQAEDYLDSVMDDAMDEFRRFEEEFDRMAEAELADLVAKSE

Query:  KARKMGSLMEKAAAIASKRYMEAAMNSATASMKSAWKTISSNKVHPS
        KARKMG LMEKAAA+ASKRYMEAAMNSATASM+SAWK ISSNKVHPS
Subjt:  KARKMGSLMEKAAAIASKRYMEAAMNSATASMKSAWKTISSNKVHPS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LAB6 Uncharacterized protein

1.7e-60

88.44

Show/hide

Query:  MEALISQFTFLSDQALQDKNFDPSTIEDLMKLFEIEAYKSWAAVELHQQEETRDAEISMQQAEDYLDSVMDDAMDEFRRFEEEFDRMAEAELADLVAKSE
        MEALISQFTFLSDQAL DKNFDPSTIEDLMKLFEIEAYKSWAA+EL  Q E +DAEI+MQQAEDYLDSVM+DAMDEFRRFEEEFDRMAEAEL  L+ KSE
Subjt:  MEALISQFTFLSDQALQDKNFDPSTIEDLMKLFEIEAYKSWAAVELHQQEETRDAEISMQQAEDYLDSVMDDAMDEFRRFEEEFDRMAEAELADLVAKSE

Query:  KARKMGSLMEKAAAIASKRYMEAAMNSATASMKSAWKTISSNKVHPS
        KARKMGSLMEKAA++ASKRYMEAAMNSATASM+SAWK ISSNKVHPS
Subjt:  KARKMGSLMEKAAAIASKRYMEAAMNSATASMKSAWKTISSNKVHPS

A0A6J1D654 uncharacterized protein LOC111017674

1.9e-67

98.64

Show/hide

Query:  MEALISQFTFLSDQALQDKNFDPSTIEDLMKLFEIEAYKSWAAVELHQQEETRDAEISMQQAEDYLDSVMDDAMDEFRRFEEEFDRMAEAELADLVAKSE
        MEALISQFTFLSDQALQDKNFDPSTIE LMKLFEIEAYKSWAAVELHQQEETRDAEISMQQAEDYLDSVMDDAMDEFRRFEEEFDRMAEAELADLVAKSE
Subjt:  MEALISQFTFLSDQALQDKNFDPSTIEDLMKLFEIEAYKSWAAVELHQQEETRDAEISMQQAEDYLDSVMDDAMDEFRRFEEEFDRMAEAELADLVAKSE

Query:  KARKMGSLMEKAAAIASKRYMEAAMNSATASMKSAWKTISSNKVHPS
        KARKMG LMEKAAAIASKRYMEAAMNSATASMKSAWKTISSNKVHPS
Subjt:  KARKMGSLMEKAAAIASKRYMEAAMNSATASMKSAWKTISSNKVHPS

A0A6J1FR93 uncharacterized protein LOC111447720

4.0e-62

90.48

Show/hide

Query:  MEALISQFTFLSDQALQDKNFDPSTIEDLMKLFEIEAYKSWAAVELHQQEETRDAEISMQQAEDYLDSVMDDAMDEFRRFEEEFDRMAEAELADLVAKSE
        MEALISQFTFLSD+ALQDKNFDPSTIEDLMKLFEIEAY SWAA+EL  Q ETRDAEI+MQQAEDYLDSVM+DAMDEFRRFEEEFDRMAEAEL DL+ KSE
Subjt:  MEALISQFTFLSDQALQDKNFDPSTIEDLMKLFEIEAYKSWAAVELHQQEETRDAEISMQQAEDYLDSVMDDAMDEFRRFEEEFDRMAEAELADLVAKSE

Query:  KARKMGSLMEKAAAIASKRYMEAAMNSATASMKSAWKTISSNKVHPS
        KARKMGSLMEKAAA+ASKRYMEAAMNSATASM+SAWK ISSNKVHPS
Subjt:  KARKMGSLMEKAAAIASKRYMEAAMNSATASMKSAWKTISSNKVHPS

A0A6J1IXX5 uncharacterized protein LOC111481629 isoform X1

7.6e-61

89.12

Show/hide

Query:  MEALISQFTFLSDQALQDKNFDPSTIEDLMKLFEIEAYKSWAAVELHQQEETRDAEISMQQAEDYLDSVMDDAMDEFRRFEEEFDRMAEAELADLVAKSE
        MEALISQFTFLSD+ALQDKNFDPSTIEDLMKLFEIEAY SWAA+EL  Q ETRDAEI+M QAEDYLDSVM+DA+DEFRRFEEEFDRMAE EL DLV KSE
Subjt:  MEALISQFTFLSDQALQDKNFDPSTIEDLMKLFEIEAYKSWAAVELHQQEETRDAEISMQQAEDYLDSVMDDAMDEFRRFEEEFDRMAEAELADLVAKSE

Query:  KARKMGSLMEKAAAIASKRYMEAAMNSATASMKSAWKTISSNKVHPS
        KARKMGSLMEKAAA+ASKRYMEAAMNSATASM+SAWK ISSNKVHPS
Subjt:  KARKMGSLMEKAAAIASKRYMEAAMNSATASMKSAWKTISSNKVHPS

A0A6J1JCA1 uncharacterized protein LOC111483158

8.4e-60

89.12

Show/hide

Query:  MEALISQFTFLSDQALQDKNFDPSTIEDLMKLFEIEAYKSWAAVELHQQEETRDAEISMQQAEDYLDSVMDDAMDEFRRFEEEFDRMAEAELADLVAKSE
        MEALISQFTFLSDQAL DKNFDPSTIEDLMKLFEIEAYKSWAA EL  Q E ++AEI+MQQAEDYLDSVM+DAMDEFRRFEEEFDRMAE EL +LV KSE
Subjt:  MEALISQFTFLSDQALQDKNFDPSTIEDLMKLFEIEAYKSWAAVELHQQEETRDAEISMQQAEDYLDSVMDDAMDEFRRFEEEFDRMAEAELADLVAKSE

Query:  KARKMGSLMEKAAAIASKRYMEAAMNSATASMKSAWKTISSNKVHPS
        KARKMGSLMEKAAAIASKRYMEAAMNSATASM+SAWK ISSNKVHPS
Subjt:  KARKMGSLMEKAAAIASKRYMEAAMNSATASMKSAWKTISSNKVHPS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G60870.1 maternal effect embryo arrest 9

9.5e-40

60.54

Show/hide

Query:  MEALISQFTFLSDQALQDKNFDPSTIEDLMKLFEIEAYKSWAAVELHQQEETRDAEISMQQAEDYLDSVMDDAMDEFRRFEEEFDRMAEAELADLVAKSE
        MEALI  FT LSDQAL DK FDPS IEDLM+LFE+++YK+WAA+E  QQ+E  +AE S+++AE  LD  M+  M+E+RR  EE +RM  AEL +L  K+E
Subjt:  MEALISQFTFLSDQALQDKNFDPSTIEDLMKLFEIEAYKSWAAVELHQQEETRDAEISMQQAEDYLDSVMDDAMDEFRRFEEEFDRMAEAELADLVAKSE

Query:  KARKMGSLMEKAAAIASKRYMEAAMNSATASMKSAWKTISSNKVHPS
         AR+ G+LMEKAA +A+KR++ AAM SA ASM+SAWKT + NKVHPS
Subjt:  KARKMGSLMEKAAAIASKRYMEAAMNSATASMKSAWKTISSNKVHPS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAAGCTCTCATCTCCCAGTTCACCTTCCTCTCCGATCAAGCTCTGCAGGACAAGAATTTCGACCCCTCCACCATCGAAGACCTCATGAAGCTCTTCGAGATCGAAGC
TTACAAGTCCTGGGCCGCCGTGGAGCTCCATCAGCAGGAGGAGACTCGAGACGCTGAGATCTCGATGCAGCAGGCTGAGGATTATCTCGATTCCGTGATGGACGACGCCA
TGGATGAGTTCAGGAGGTTCGAGGAGGAGTTCGATCGGATGGCCGAGGCCGAGCTCGCCGACCTGGTTGCCAAGTCGGAGAAGGCTCGGAAGATGGGGAGTTTGATGGAG
AAGGCGGCGGCGATCGCGTCCAAGAGGTATATGGAAGCCGCCATGAACTCCGCCACCGCTTCCATGAAATCGGCCTGGAAGACGATTTCGTCTAATAAGGTTCATCCTTC
T

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MEALISQFTFLSDQALQDKNFDPSTIEDLMKLFEIEAYKSWAAVELHQQEETRDAEISMQQAEDYLDSVMDDAMDEFRRFEEEFDRMAEAELADLVAKSEKARKMGSLME
KAAAIASKRYMEAAMNSATASMKSAWKTISSNKVHPS

MS012492 (gene) of Bitter gourd (TR) v1 genome