; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS012496 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012496
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionnigrin b-like
Genome locationscaffold63:1097835..1098701
RNA-Seq ExpressionMS012496
SyntenyMS012496
Gene Ontology termsGO:0017148 - negative regulation of translation (biological process)
GO:0030246 - carbohydrate binding (molecular function)
GO:0030598 - rRNA N-glycosylase activity (molecular function)
InterPro domainsIPR000772 - Ricin B, lectin domain
IPR001574 - Ribosome-inactivating protein
IPR035992 - Ricin B-like lectins


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149159.1 beta-galactoside-specific lectin 3-like [Momordica charantia]2.5e-14284.83Show/hide
Query:  MRGMVVYIVVALSVLMSVHRGMAAYPYPRYGSFGKISHIVGRDGMCLDIAVPNVRPLYAQTQLSRCDVAKQTQMWSILEDGTIRTKDNVYCLVPYNDAYE
        M+ MVV IVVALSVLMS H  MAAYPYPRYGSFGK SHIVGRDG+CLDIA      +Y QTQLS C+ AKQTQ+W+ILEDGTIRTKD VYCLVPYNDAYE
Subjt:  MRGMVVYIVVALSVLMSVHRGMAAYPYPRYGSFGKISHIVGRDGMCLDIAVPNVRPLYAQTQLSRCDVAKQTQMWSILEDGTIRTKDNVYCLVPYNDAYE

Query:  AKAVLGKCSELIRSDKKWKHRSDGTFVHENSGFVLTAKPDNFVILGTDAYTPSQSWEATEGLSPSVVNIKWLENQCLQSMDNGAPFVYLNLCDKKNKNQH
        AKAVLGKC+EL+RS KKW H++DGTFVHEN+G VLTAKPDNFV+LGTD  TPSQSWEATEGL+PSVVNI+W E  CLQSMDNGAPFVYLN CDKKNKNQH
Subjt:  AKAVLGKCSELIRSDKKWKHRSDGTFVHENSGFVLTAKPDNFVILGTDAYTPSQSWEATEGLSPSVVNIKWLENQCLQSMDNGAPFVYLNLCDKKNKNQH

Query:  WALYSDGTIRVDNYGNR-DYCLTSQRNPSSVILVSNCDDKATQRWDINEDNFIYHPNTNLVLDVDRKPEGSQIVVIDTRDGTPTQQWTIL
        WALYSDGTIRVDNYG R DYCLTSQRNPSSVILVSNCDDKATQRW INE+NFIYHPNTNLVLDVDRKPEGSQIVVIDTRDGTP QQWTIL
Subjt:  WALYSDGTIRVDNYGNR-DYCLTSQRNPSSVILVSNCDDKATQRWDINEDNFIYHPNTNLVLDVDRKPEGSQIVVIDTRDGTPTQQWTIL

XP_022149160.1 nigrin b-like [Momordica charantia]2.9e-16798.27Show/hide
Query:  MRGMVVYIVVALSVLMSVHRGMAAYPYPRYGSFGKISHIVGRDGMCLDIAVPNVRPLYAQTQLSRCDVAKQTQMWSILEDGTIRTKDNVYCLVPYNDAYE
        MRGMVVYIVVALSVLMSV+RGMAAYPYP YGSFGKISHIVGRDGMCLDI VPNVRPLYAQTQLSRCDVAKQTQMWSILEDGTIRTKDN+YCLVPYNDAYE
Subjt:  MRGMVVYIVVALSVLMSVHRGMAAYPYPRYGSFGKISHIVGRDGMCLDIAVPNVRPLYAQTQLSRCDVAKQTQMWSILEDGTIRTKDNVYCLVPYNDAYE

Query:  AKAVLGKCSELIRSDKKWKHRSDGTFVHENSGFVLTAKPDNFVILGTDAYTPSQSWEATEGLSPSVVNIKWLENQCLQSMDNGAPFVYLNLCDKKNKNQH
        AKAVLGKCSELIRSDKKWKHRSDGTFVHENSGFVLTAKPDNFVILGTDAYTPSQSWEATEGLSPSVVNIKWLENQCLQSMDNGAPFVYLNLCDKKNKNQH
Subjt:  AKAVLGKCSELIRSDKKWKHRSDGTFVHENSGFVLTAKPDNFVILGTDAYTPSQSWEATEGLSPSVVNIKWLENQCLQSMDNGAPFVYLNLCDKKNKNQH

Query:  WALYSDGTIRVDNYGNRDYCLTSQRNPSSVILVSNCDDKATQRWDINEDNFIYHPNTNLVLDVDRKPEGSQIVVIDTRDGTPTQQWTIL
        WALYSDGTIRVDNYG+RDYCLTSQRNPSSVILVSNCDDKATQRWDINEDNFIYHPNTNLVLDVDRKPEGSQIVVIDTRDGTPTQQWTIL
Subjt:  WALYSDGTIRVDNYGNRDYCLTSQRNPSSVILVSNCDDKATQRWDINEDNFIYHPNTNLVLDVDRKPEGSQIVVIDTRDGTPTQQWTIL

XP_022941584.1 nigrin b-like isoform X1 [Cucurbita moschata]1.3e-6648.26Show/hide
Query:  VYIVVALSVLMSVHRGMAAYPYPRYGSFGKISHIVGRDGMCLDIAVPNVRPLYAQTQLSRCDVAKQTQMWSILEDGTIRTKDNVYCLVPYNDAYE---AK
        V   +AL+  ++ H  +AA     YGSFG  +H+VGRDG+CLD  +  +   Y  T LS+C+  K +Q+WSILEDGTIR  D  +CLVP + + E   A 
Subjt:  VYIVVALSVLMSVHRGMAAYPYPRYGSFGKISHIVGRDGMCLDIAVPNVRPLYAQTQLSRCDVAKQTQMWSILEDGTIRTKDNVYCLVPYNDAYE---AK

Query:  AVLGKCSELIRSDKKWKHRSDGTFVHENSGFVLTAKPDNFVILGTDAYTPSQSWEATEGLSPSVVNIKWLENQCLQSMDNGAPFVYLNLCDKKNKNQHWA
         V   CS+ IR D KW    DGT  H+ SG VLTAKP   V +  +   PSQSWEATE   P V NIKWL+N CL+S++    +V LN C + +KNQ WA
Subjt:  AVLGKCSELIRSDKKWKHRSDGTFVHENSGFVLTAKPDNFVILGTDAYTPSQSWEATEGLSPSVVNIKWLENQCLQSMDNGAPFVYLNLCDKKNKNQHWA

Query:  LYSDGTIRVDNYGNRDYCLT-SQRNPSSVILVSNCDDKATQRWDINEDNFIYHPNTNLVLDVDRK-PEGSQIVVIDTRDGTPTQQWTI
        LY DGTIR + Y  R  CLT S+RN  ++++VS C DK  QRW + ED+ I HPNTNLV+DV R+ P    ++V+D  DG  +Q+WTI
Subjt:  LYSDGTIRVDNYGNRDYCLT-SQRNPSSVILVSNCDDKATQRWDINEDNFIYHPNTNLVLDVDRK-PEGSQIVVIDTRDGTPTQQWTI

XP_022982216.1 ribosome-inactivating protein SNAI-like [Cucurbita maxima]6.4e-6646.76Show/hide
Query:  MRGMVVYIVVALSVLMSVHRGMAAYPYPRYGSFGKISHIVGRDGMCLDIAVPNVRPLYAQTQLSRCDVAKQTQMWSILEDGTIRTKDNVYCLVP---YND
        MR +++ I +A S+ ++            YG+FG  +H+VGRDG+CLD  +  +   Y QT LS+C   K +Q+W+ILEDGTIR  D  YCLVP   +  
Subjt:  MRGMVVYIVVALSVLMSVHRGMAAYPYPRYGSFGKISHIVGRDGMCLDIAVPNVRPLYAQTQLSRCDVAKQTQMWSILEDGTIRTKDNVYCLVP---YND

Query:  AYEAKAVLGKCSELIRSDKKWKHRSDGTFVHENSGFVLTAKPDNFVILGTDAYTPSQSWEATEGLSPSVVNIKWLENQCLQSMDNGAPFVYLNLCDKKNK
              V+  C++ +R D KW  + DGT  H+ SG VLTAKP   V L  +   PSQSWEATE L P V NIKWL+N CL+S +    +V LN C + +K
Subjt:  AYEAKAVLGKCSELIRSDKKWKHRSDGTFVHENSGFVLTAKPDNFVILGTDAYTPSQSWEATEGLSPSVVNIKWLENQCLQSMDNGAPFVYLNLCDKKNK

Query:  NQHWALYSDGTIRVDNYGNRDYCLT-SQRNPSSVILVSNCDDKATQRWDINEDNFIYHPNTNLVLDVDRK-PEGSQIVVIDTRDGTPTQQWTI
        NQ WALY DGTIR + Y  R  CLT S+RN  ++++VS C DK  QRW + EDN I HPNTNLV+DV R+ P    ++V+D  DG P+Q+W+I
Subjt:  NQHWALYSDGTIRVDNYGNRDYCLT-SQRNPSSVILVSNCDDKATQRWDINEDNFIYHPNTNLVLDVDRK-PEGSQIVVIDTRDGTPTQQWTI

XP_023551012.1 nigrin b-like [Cucurbita pepo subsp. pepo]7.6e-6748.61Show/hide
Query:  VYIVVALSVLMSVHRGMAAYPYPRYGSFGKISHIVGRDGMCLDIAVPNVRPLYAQTQLSRCDVAKQTQMWSILEDGTIRTKDNVYCLVPYNDAYE---AK
        V   +AL+  ++ H  +AA     YGSFG  SH+VGRDG+CL+  +  +   Y  T LS C+  K  Q+WSILEDGTIR  D  +CLVP + + E   A 
Subjt:  VYIVVALSVLMSVHRGMAAYPYPRYGSFGKISHIVGRDGMCLDIAVPNVRPLYAQTQLSRCDVAKQTQMWSILEDGTIRTKDNVYCLVPYNDAYE---AK

Query:  AVLGKCSELIRSDKKWKHRSDGTFVHENSGFVLTAKPDNFVILGTDAYTPSQSWEATEGLSPSVVNIKWLENQCLQSMDNGAPFVYLNLCDKKNKNQHWA
         V   CS  IR D KW    DGT  H+ SG VLTAKP   V +  +   PSQSWEATE  +P V NIKWL+N CL+S++    +V L  C + +KNQ WA
Subjt:  AVLGKCSELIRSDKKWKHRSDGTFVHENSGFVLTAKPDNFVILGTDAYTPSQSWEATEGLSPSVVNIKWLENQCLQSMDNGAPFVYLNLCDKKNKNQHWA

Query:  LYSDGTIRVDNYGNRDYCLTS-QRNPSSVILVSNCDDKATQRWDINEDNFIYHPNTNLVLDVDRK-PEGSQIVVIDTRDGTPTQQWTI
        LY DGTIR + Y  R  CLTS +RN  ++++VS C DK  QRW + EDN I HPNTNLV+DV R+ P    ++V++  DG P+QQWTI
Subjt:  LYSDGTIRVDNYGNRDYCLTS-QRNPSSVILVSNCDDKATQRWDINEDNFIYHPNTNLVLDVDRK-PEGSQIVVIDTRDGTPTQQWTI

TrEMBL top hitse value%identityAlignment
A0A6J1D4Y7 nigrin b-like1.4e-16798.27Show/hide
Query:  MRGMVVYIVVALSVLMSVHRGMAAYPYPRYGSFGKISHIVGRDGMCLDIAVPNVRPLYAQTQLSRCDVAKQTQMWSILEDGTIRTKDNVYCLVPYNDAYE
        MRGMVVYIVVALSVLMSV+RGMAAYPYP YGSFGKISHIVGRDGMCLDI VPNVRPLYAQTQLSRCDVAKQTQMWSILEDGTIRTKDN+YCLVPYNDAYE
Subjt:  MRGMVVYIVVALSVLMSVHRGMAAYPYPRYGSFGKISHIVGRDGMCLDIAVPNVRPLYAQTQLSRCDVAKQTQMWSILEDGTIRTKDNVYCLVPYNDAYE

Query:  AKAVLGKCSELIRSDKKWKHRSDGTFVHENSGFVLTAKPDNFVILGTDAYTPSQSWEATEGLSPSVVNIKWLENQCLQSMDNGAPFVYLNLCDKKNKNQH
        AKAVLGKCSELIRSDKKWKHRSDGTFVHENSGFVLTAKPDNFVILGTDAYTPSQSWEATEGLSPSVVNIKWLENQCLQSMDNGAPFVYLNLCDKKNKNQH
Subjt:  AKAVLGKCSELIRSDKKWKHRSDGTFVHENSGFVLTAKPDNFVILGTDAYTPSQSWEATEGLSPSVVNIKWLENQCLQSMDNGAPFVYLNLCDKKNKNQH

Query:  WALYSDGTIRVDNYGNRDYCLTSQRNPSSVILVSNCDDKATQRWDINEDNFIYHPNTNLVLDVDRKPEGSQIVVIDTRDGTPTQQWTIL
        WALYSDGTIRVDNYG+RDYCLTSQRNPSSVILVSNCDDKATQRWDINEDNFIYHPNTNLVLDVDRKPEGSQIVVIDTRDGTPTQQWTIL
Subjt:  WALYSDGTIRVDNYGNRDYCLTSQRNPSSVILVSNCDDKATQRWDINEDNFIYHPNTNLVLDVDRKPEGSQIVVIDTRDGTPTQQWTIL

A0A6J1D675 beta-galactoside-specific lectin 3-like1.2e-14284.83Show/hide
Query:  MRGMVVYIVVALSVLMSVHRGMAAYPYPRYGSFGKISHIVGRDGMCLDIAVPNVRPLYAQTQLSRCDVAKQTQMWSILEDGTIRTKDNVYCLVPYNDAYE
        M+ MVV IVVALSVLMS H  MAAYPYPRYGSFGK SHIVGRDG+CLDIA      +Y QTQLS C+ AKQTQ+W+ILEDGTIRTKD VYCLVPYNDAYE
Subjt:  MRGMVVYIVVALSVLMSVHRGMAAYPYPRYGSFGKISHIVGRDGMCLDIAVPNVRPLYAQTQLSRCDVAKQTQMWSILEDGTIRTKDNVYCLVPYNDAYE

Query:  AKAVLGKCSELIRSDKKWKHRSDGTFVHENSGFVLTAKPDNFVILGTDAYTPSQSWEATEGLSPSVVNIKWLENQCLQSMDNGAPFVYLNLCDKKNKNQH
        AKAVLGKC+EL+RS KKW H++DGTFVHEN+G VLTAKPDNFV+LGTD  TPSQSWEATEGL+PSVVNI+W E  CLQSMDNGAPFVYLN CDKKNKNQH
Subjt:  AKAVLGKCSELIRSDKKWKHRSDGTFVHENSGFVLTAKPDNFVILGTDAYTPSQSWEATEGLSPSVVNIKWLENQCLQSMDNGAPFVYLNLCDKKNKNQH

Query:  WALYSDGTIRVDNYGNR-DYCLTSQRNPSSVILVSNCDDKATQRWDINEDNFIYHPNTNLVLDVDRKPEGSQIVVIDTRDGTPTQQWTIL
        WALYSDGTIRVDNYG R DYCLTSQRNPSSVILVSNCDDKATQRW INE+NFIYHPNTNLVLDVDRKPEGSQIVVIDTRDGTP QQWTIL
Subjt:  WALYSDGTIRVDNYGNR-DYCLTSQRNPSSVILVSNCDDKATQRWDINEDNFIYHPNTNLVLDVDRKPEGSQIVVIDTRDGTPTQQWTIL

A0A6J1FNV0 nigrin b-like isoform X16.2e-6748.26Show/hide
Query:  VYIVVALSVLMSVHRGMAAYPYPRYGSFGKISHIVGRDGMCLDIAVPNVRPLYAQTQLSRCDVAKQTQMWSILEDGTIRTKDNVYCLVPYNDAYE---AK
        V   +AL+  ++ H  +AA     YGSFG  +H+VGRDG+CLD  +  +   Y  T LS+C+  K +Q+WSILEDGTIR  D  +CLVP + + E   A 
Subjt:  VYIVVALSVLMSVHRGMAAYPYPRYGSFGKISHIVGRDGMCLDIAVPNVRPLYAQTQLSRCDVAKQTQMWSILEDGTIRTKDNVYCLVPYNDAYE---AK

Query:  AVLGKCSELIRSDKKWKHRSDGTFVHENSGFVLTAKPDNFVILGTDAYTPSQSWEATEGLSPSVVNIKWLENQCLQSMDNGAPFVYLNLCDKKNKNQHWA
         V   CS+ IR D KW    DGT  H+ SG VLTAKP   V +  +   PSQSWEATE   P V NIKWL+N CL+S++    +V LN C + +KNQ WA
Subjt:  AVLGKCSELIRSDKKWKHRSDGTFVHENSGFVLTAKPDNFVILGTDAYTPSQSWEATEGLSPSVVNIKWLENQCLQSMDNGAPFVYLNLCDKKNKNQHWA

Query:  LYSDGTIRVDNYGNRDYCLT-SQRNPSSVILVSNCDDKATQRWDINEDNFIYHPNTNLVLDVDRK-PEGSQIVVIDTRDGTPTQQWTI
        LY DGTIR + Y  R  CLT S+RN  ++++VS C DK  QRW + ED+ I HPNTNLV+DV R+ P    ++V+D  DG  +Q+WTI
Subjt:  LYSDGTIRVDNYGNRDYCLT-SQRNPSSVILVSNCDDKATQRWDINEDNFIYHPNTNLVLDVDRK-PEGSQIVVIDTRDGTPTQQWTI

A0A6J1FU34 nigrin b-like isoform X29.0e-6647.95Show/hide
Query:  RGMVVYIVVALSVLMSVHRGMAAYPYPRYGSFGKISHIVGRDGMCLDIAVPNVRPLYAQTQLSRCDVAKQTQMWSILEDGTIRTKDNVYCLVPYNDAYE-
        R +++ +VVA S  ++ H G A      YG+FG  +H+VGRDG+CLD  +  +   Y  T LS+C+  K +Q+WSILEDGTIR  D  +CLVP + + E 
Subjt:  RGMVVYIVVALSVLMSVHRGMAAYPYPRYGSFGKISHIVGRDGMCLDIAVPNVRPLYAQTQLSRCDVAKQTQMWSILEDGTIRTKDNVYCLVPYNDAYE-

Query:  --AKAVLGKCSELIRSDKKWKHRSDGTFVHENSGFVLTAKPDNFVILGTDAYTPSQSWEATEGLSPSVVNIKWLENQCLQSMDNGAPFVYLNLCDKKNKN
          A  V   CS+ IR D KW    DGT  H+ SG VLTAKP   V +  +   PSQSWEATE   P V NIKWL+N CL+S++    +V LN C + +KN
Subjt:  --AKAVLGKCSELIRSDKKWKHRSDGTFVHENSGFVLTAKPDNFVILGTDAYTPSQSWEATEGLSPSVVNIKWLENQCLQSMDNGAPFVYLNLCDKKNKN

Query:  QHWALYSDGTIRVDNYGNRDYCLT-SQRNPSSVILVSNCDDKATQRWDINEDNFIYHPNTNLVLDVDRK-PEGSQIVVIDTRDGTPTQQWTI
        Q WALY DGTIR + Y  R  CLT S+RN  ++++VS C DK  QRW + ED+ I HPNTNLV+DV R+ P    ++V+D  DG  +Q+WTI
Subjt:  QHWALYSDGTIRVDNYGNRDYCLT-SQRNPSSVILVSNCDDKATQRWDINEDNFIYHPNTNLVLDVDRK-PEGSQIVVIDTRDGTPTQQWTI

A0A6J1IYQ6 ribosome-inactivating protein SNAI-like3.1e-6646.76Show/hide
Query:  MRGMVVYIVVALSVLMSVHRGMAAYPYPRYGSFGKISHIVGRDGMCLDIAVPNVRPLYAQTQLSRCDVAKQTQMWSILEDGTIRTKDNVYCLVP---YND
        MR +++ I +A S+ ++            YG+FG  +H+VGRDG+CLD  +  +   Y QT LS+C   K +Q+W+ILEDGTIR  D  YCLVP   +  
Subjt:  MRGMVVYIVVALSVLMSVHRGMAAYPYPRYGSFGKISHIVGRDGMCLDIAVPNVRPLYAQTQLSRCDVAKQTQMWSILEDGTIRTKDNVYCLVP---YND

Query:  AYEAKAVLGKCSELIRSDKKWKHRSDGTFVHENSGFVLTAKPDNFVILGTDAYTPSQSWEATEGLSPSVVNIKWLENQCLQSMDNGAPFVYLNLCDKKNK
              V+  C++ +R D KW  + DGT  H+ SG VLTAKP   V L  +   PSQSWEATE L P V NIKWL+N CL+S +    +V LN C + +K
Subjt:  AYEAKAVLGKCSELIRSDKKWKHRSDGTFVHENSGFVLTAKPDNFVILGTDAYTPSQSWEATEGLSPSVVNIKWLENQCLQSMDNGAPFVYLNLCDKKNK

Query:  NQHWALYSDGTIRVDNYGNRDYCLT-SQRNPSSVILVSNCDDKATQRWDINEDNFIYHPNTNLVLDVDRK-PEGSQIVVIDTRDGTPTQQWTI
        NQ WALY DGTIR + Y  R  CLT S+RN  ++++VS C DK  QRW + EDN I HPNTNLV+DV R+ P    ++V+D  DG P+Q+W+I
Subjt:  NQHWALYSDGTIRVDNYGNRDYCLT-SQRNPSSVILVSNCDDKATQRWDINEDNFIYHPNTNLVLDVDRK-PEGSQIVVIDTRDGTPTQQWTI

SwissProt top hitse value%identityAlignment
P11140 Abrin-a5.2e-2629.18Show/hide
Query:  IVGRDGMCLDIAVPNVRPLYAQTQLSRC-DVAKQTQMWSILEDGTIRTKDNVYCLVPYNDAYEAKAVLGKCSELIRSDKKWKHRSDGTFVHENSGFVLTA
        I GRDGMC+D+   N      +  + +C D  ++ Q+W++  D TIR+  N  CL  Y  A  +  ++  C+  +     W+   +GT ++  S  VL+A
Subjt:  IVGRDGMCLDIAVPNVRPLYAQTQLSRC-DVAKQTQMWSILEDGTIRTKDNVYCLVPYNDAYEAKAVLGKCSELIRSDKKWKHRSDGTFVHENSGFVLTA

Query:  KPDNF---VILGTDAYTPSQSWEATEGLSPSVVNIKWLENQCLQSMDNGAPFVYLNLCDKKNKNQHWALYSDGTIRVDNYGNRDYCLTSQ--RNPSSVIL
        +  +    + + T+ Y   Q W      SP V +I    + C+Q+  +    V++  CD   K Q WALY+DG+IR  +  N + CLTS+  +  S+++L
Subjt:  KPDNF---VILGTDAYTPSQSWEATEGLSPSVVNIKWLENQCLQSMDNGAPFVYLNLCDKKNKNQHWALYSDGTIRVDNYGNRDYCLTSQ--RNPSSVIL

Query:  VSNCDDKATQRWDINEDNFIYHPNTNLVLDVDRKPEGSQIVVIDTRDGTPTQQWTIL
        +   +  A+QRW    D  IY    ++V+DV       + +++    G P Q W  L
Subjt:  VSNCDDKATQRWDINEDNFIYHPNTNLVLDVDRKPEGSQIVVIDTRDGTPTQQWTIL

P28590 Abrin-c2.3e-2628.91Show/hide
Query:  IVGRDGMCLDIAVPNVRPLYAQTQLSRCDVAKQTQMWSILEDGTIRTKDNVYCLVPYNDAYEAKAVLGKCSELIRSDKKWKHRSDGTFVHENSGFVLTAK
        I GRDGMC+D+                 D  ++ Q+W++  D TIR+  N  CL     A     ++  C+  +     W+   +GT ++  S  VL+A+
Subjt:  IVGRDGMCLDIAVPNVRPLYAQTQLSRCDVAKQTQMWSILEDGTIRTKDNVYCLVPYNDAYEAKAVLGKCSELIRSDKKWKHRSDGTFVHENSGFVLTAK

Query:  PDNF---VILGTDAYTPSQSWEATEGLSPSVVNIKWLENQCLQSMDNGAPFVYLNLCDKKNKNQHWALYSDGTIRVDNYGNRDYCLTSQ--RNPSSVILV
          +    + + T+ Y   Q W      SP V +I    + C+Q+  +    V+L  CD   K Q WALY+DG+IR  +  N + CLTS+  +  S ++L+
Subjt:  PDNF---VILGTDAYTPSQSWEATEGLSPSVVNIKWLENQCLQSMDNGAPFVYLNLCDKKNKNQHWALYSDGTIRVDNYGNRDYCLTSQ--RNPSSVILV

Query:  SNCDDKATQRWDINEDNFIYHPNTNLVLDVDRKPEGSQIVVIDTRDGTPTQQWTIL
        +  +  A+QRW    D  IY+ + ++V+DV R     + +++    G P Q W  L
Subjt:  SNCDDKATQRWDINEDNFIYHPNTNLVLDVDRKPEGSQIVVIDTRDGTPTQQWTIL

P82683 Beta-galactoside-specific lectin 32.7e-2731.91Show/hide
Query:  IVGRDGMCLDI---AVPNVRPLYAQTQLSRC-DVAKQTQMWSILEDGTIRTKDNVYCLVPYNDAYEAKAVLGKCSELIRSDKKWKHRSDGTFVHENSGFV
        IVGRDG+C+D+      N  P+    QLS C       Q+W+I  DGTIR+  N  CL  Y        ++  C+  +R    W+   +GT ++  S  V
Subjt:  IVGRDGMCLDI---AVPNVRPLYAQTQLSRC-DVAKQTQMWSILEDGTIRTKDNVYCLVPYNDAYEAKAVLGKCSELIRSDKKWKHRSDGTFVHENSGFV

Query:  LTA---KPDNFVILGTDAYTPSQSWEATEGLSPSVVNIKWLENQCLQSMDNGAPFVYLNLCDKKNKNQHWALYSDGTIRVDNYGNRDYCLTSQRNP-SSV
        L A        + + T  Y+  Q W A    +P  V I    + C+++  NGA  V++  C    +NQ+WALY DG+IR     N+D CLT Q +  ++V
Subjt:  LTA---KPDNFVILGTDAYTPSQSWEATEGLSPSVVNIKWLENQCLQSMDNGAPFVYLNLCDKKNKNQHWALYSDGTIRVDNYGNRDYCLTSQRNP-SSV

Query:  ILVSNCD-DKATQRWDINEDNFIYHPNTNLVLDVDRKPEGSQIVVIDTRDGTPTQQW
        I + +C    + QRW    +  I + N  LV+DV +     + ++I    G P Q W
Subjt:  ILVSNCD-DKATQRWDINEDNFIYHPNTNLVLDVDRKPEGSQIVVIDTRDGTPTQQW

Q06077 Abrin-b3.9e-2628.52Show/hide
Query:  IVGRDGMCLDIAVPNVRPLYAQTQLSRCDVAKQTQMWSILEDGTIRTKDNVYCLVPYNDAYEAKAVLGKCSELIRSDKKWKHRSDGTFVHENSGFVLTAK
        I GR+GMC+D+                 D  ++ Q+W++  D TIR+  N  CL     A     ++  C+  +     W+   +GT ++  S  VL+A+
Subjt:  IVGRDGMCLDIAVPNVRPLYAQTQLSRCDVAKQTQMWSILEDGTIRTKDNVYCLVPYNDAYEAKAVLGKCSELIRSDKKWKHRSDGTFVHENSGFVLTAK

Query:  PDNF---VILGTDAYTPSQSWEATEGLSPSVVNIKWLENQCLQSMDNGAPFVYLNLCDKKNKNQHWALYSDGTIRVDNYGNRDYCLTSQ--RNPSSVILV
          +    + + T+ Y   Q W      SP V +I    + C+Q+  +    V+L  CD   K Q WALY+DG+IR  +  N + CLTS+  +  S ++L+
Subjt:  PDNF---VILGTDAYTPSQSWEATEGLSPSVVNIKWLENQCLQSMDNGAPFVYLNLCDKKNKNQHWALYSDGTIRVDNYGNRDYCLTSQ--RNPSSVILV

Query:  SNCDDKATQRWDINEDNFIYHPNTNLVLDVDRKPEGSQIVVIDTRDGTPTQQWTIL
        +  +  A+QRW    D  IY+ + ++V+DV R     + +++    G P Q W  L
Subjt:  SNCDDKATQRWDINEDNFIYHPNTNLVLDVDRKPEGSQIVVIDTRDGTPTQQWTIL

U3KRF8 Seed lectin (Fragments)6.7e-2630.53Show/hide
Query:  KISHIVGRDGMCLDIAVPNVRPLYAQTQLSRCDVAKQTQMWSILEDGTIRTKDNVYCLVPYNDAYEAKAVLGKCSELIRSDKKWKHRSDGTFVHEN-SGF
        + + I GRD +C+D+A   +    ++  L  C   +  Q W+   DGT+R+     CL   N  +    V+  CS+L   D  W     GT ++ N    
Subjt:  KISHIVGRDGMCLDIAVPNVRPLYAQTQLSRCDVAKQTQMWSILEDGTIRTKDNVYCLVPYNDAYEAKAVLGKCSELIRSDKKWKHRSDGTFVHEN-SGF

Query:  VLT---AKPDNFVILGTDAYTPSQSWEATEGLSPSVVNIKWLENQCLQSMDNGAPFVYLNLCDKKNKNQHWALYSDGTIRVDNYGNRDYCLTSQRNPS--
         LT   A     + +  + Y+ SQ W     + P + +I  L++ CL++ D G   ++L  C    + Q WALYSDGTIRVD+  NR+ C+T+  +    
Subjt:  VLT---AKPDNFVILGTDAYTPSQSWEATEGLSPSVVNIKWLENQCLQSMDNGAPFVYLNLCDKKNKNQHWALYSDGTIRVDNYGNRDYCLTSQRNPS--

Query:  -SVILVSNCDDKATQRWDINEDNFIYHP-NTNLVLDVDRKPEGSQIVVIDTRDGTPTQQWTI
          VI + NCD    QRW    D  I  P N  L +DV R     + +++    G   QQW +
Subjt:  -SVILVSNCDDKATQRWDINEDNFIYHP-NTNLVLDVDRKPEGSQIVVIDTRDGTPTQQWTI

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGGATGGTGGTCTACATTGTTGTCGCACTTTCAGTACTAATGAGCGTCCATCGTGGCATGGCGGCCTATCCATATCCTAGGTATGGAAGCTTCGGAAAAATATC
ACATATTGTAGGTCGAGATGGAATGTGTTTGGACATTGCTGTTCCCAATGTCCGACCACTTTACGCTCAAACTCAATTATCGCGGTGTGACGTTGCGAAACAGACCCAAA
TGTGGAGCATCCTTGAAGATGGCACCATTCGAACCAAGGACAACGTATATTGCTTGGTTCCTTACAACGATGCGTATGAAGCCAAAGCCGTATTGGGCAAGTGCTCTGAA
TTGATAAGAAGTGACAAGAAATGGAAGCATAGGAGTGATGGCACTTTTGTCCACGAGAACTCGGGCTTCGTCCTGACAGCGAAACCAGACAACTTCGTGATATTGGGAAC
TGACGCATACACCCCATCCCAAAGCTGGGAAGCCACCGAGGGTCTCTCCCCTTCTGTGGTTAACATCAAGTGGCTTGAAAACCAGTGTTTGCAGTCCATGGATAACGGTG
CTCCCTTTGTGTATTTGAATCTATGTGATAAAAAAAATAAGAACCAACATTGGGCACTATATTCTGACGGCACCATCCGTGTTGATAACTATGGCAACAGAGACTACTGC
TTGACGTCTCAAAGAAATCCATCTAGTGTCATCCTTGTGTCTAACTGTGACGACAAGGCGACACAACGATGGGATATTAATGAAGACAACTTCATTTACCATCCCAACAC
TAACTTGGTCTTGGATGTCGATAGAAAACCTGAGGGATCCCAAATTGTCGTTATCGACACTCGTGATGGCACTCCTACCCAGCAATGGACGATACTC
mRNA sequenceShow/hide mRNA sequence
ATGAGAGGGATGGTGGTCTACATTGTTGTCGCACTTTCAGTACTAATGAGCGTCCATCGTGGCATGGCGGCCTATCCATATCCTAGGTATGGAAGCTTCGGAAAAATATC
ACATATTGTAGGTCGAGATGGAATGTGTTTGGACATTGCTGTTCCCAATGTCCGACCACTTTACGCTCAAACTCAATTATCGCGGTGTGACGTTGCGAAACAGACCCAAA
TGTGGAGCATCCTTGAAGATGGCACCATTCGAACCAAGGACAACGTATATTGCTTGGTTCCTTACAACGATGCGTATGAAGCCAAAGCCGTATTGGGCAAGTGCTCTGAA
TTGATAAGAAGTGACAAGAAATGGAAGCATAGGAGTGATGGCACTTTTGTCCACGAGAACTCGGGCTTCGTCCTGACAGCGAAACCAGACAACTTCGTGATATTGGGAAC
TGACGCATACACCCCATCCCAAAGCTGGGAAGCCACCGAGGGTCTCTCCCCTTCTGTGGTTAACATCAAGTGGCTTGAAAACCAGTGTTTGCAGTCCATGGATAACGGTG
CTCCCTTTGTGTATTTGAATCTATGTGATAAAAAAAATAAGAACCAACATTGGGCACTATATTCTGACGGCACCATCCGTGTTGATAACTATGGCAACAGAGACTACTGC
TTGACGTCTCAAAGAAATCCATCTAGTGTCATCCTTGTGTCTAACTGTGACGACAAGGCGACACAACGATGGGATATTAATGAAGACAACTTCATTTACCATCCCAACAC
TAACTTGGTCTTGGATGTCGATAGAAAACCTGAGGGATCCCAAATTGTCGTTATCGACACTCGTGATGGCACTCCTACCCAGCAATGGACGATACTC
Protein sequenceShow/hide protein sequence
MRGMVVYIVVALSVLMSVHRGMAAYPYPRYGSFGKISHIVGRDGMCLDIAVPNVRPLYAQTQLSRCDVAKQTQMWSILEDGTIRTKDNVYCLVPYNDAYEAKAVLGKCSE
LIRSDKKWKHRSDGTFVHENSGFVLTAKPDNFVILGTDAYTPSQSWEATEGLSPSVVNIKWLENQCLQSMDNGAPFVYLNLCDKKNKNQHWALYSDGTIRVDNYGNRDYC
LTSQRNPSSVILVSNCDDKATQRWDINEDNFIYHPNTNLVLDVDRKPEGSQIVVIDTRDGTPTQQWTIL