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MS012507 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012507
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationscaffold63:1192701..1192820
RNA-Seq ExpressionMS012507
SyntenyMS012507
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
GO:0008236 - serine-type peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QRI60614.1 clp protease proteolytic subunit [Kennedia prostrata]8.7e-0666.67Show/hide
Query:  TREFILKTE-----KTTFIRIYVQRISKPLWIVSEDMERDVFMSA
        T EFIL+ E     + T  R+YVQR SKPLWI+SEDMERDVFMSA
Subjt:  TREFILKTE-----KTTFIRIYVQRISKPLWIVSEDMERDVFMSA

YP_009108254.1 clp protease proteolytic subunit [Cistanche phelypaea]8.7e-0666.67Show/hide
Query:  TREFILKTE-----KTTFIRIYVQRISKPLWIVSEDMERDVFMSA
        T EFIL+ E     + T  R+YVQR SKPLW+VSEDMERDVFMSA
Subjt:  TREFILKTE-----KTTFIRIYVQRISKPLWIVSEDMERDVFMSA

YP_009556285.1 clp protease proteolytic subunit [Simmondsia chinensis]8.7e-0666.67Show/hide
Query:  TREFILKTE-----KTTFIRIYVQRISKPLWIVSEDMERDVFMSA
        T EFIL+ E     + T  R+YVQR SKPLW+VSEDMERDVFMSA
Subjt:  TREFILKTE-----KTTFIRIYVQRISKPLWIVSEDMERDVFMSA

YP_009664062.1 ATP-dependent Clp protease proteolytic subunit [Wightia speciosissima]8.7e-0666.67Show/hide
Query:  TREFILKTE-----KTTFIRIYVQRISKPLWIVSEDMERDVFMSA
        T EFIL+ E     + T  R+YVQR SKPLW+VSEDMERDVFMSA
Subjt:  TREFILKTE-----KTTFIRIYVQRISKPLWIVSEDMERDVFMSA

YP_010033587.1 clp protease proteolytic subunit [Christia vespertilionis]8.7e-0666.67Show/hide
Query:  TREFILKTE-----KTTFIRIYVQRISKPLWIVSEDMERDVFMSA
        T EFIL+ E     + T  R+YVQR SKPLWI+SEDMERDVFMSA
Subjt:  TREFILKTE-----KTTFIRIYVQRISKPLWIVSEDMERDVFMSA

TrEMBL top hitse value%identityAlignment
A0A097ZR63 ATP-dependent Clp protease proteolytic subunit4.2e-0666.67Show/hide
Query:  TREFILKTE-----KTTFIRIYVQRISKPLWIVSEDMERDVFMSA
        T EFIL+ E     + T  R+YVQR SKPLW+VSEDMERDVFMSA
Subjt:  TREFILKTE-----KTTFIRIYVQRISKPLWIVSEDMERDVFMSA

A0A411K5H7 ATP-dependent Clp protease proteolytic subunit4.2e-0666.67Show/hide
Query:  TREFILKTE-----KTTFIRIYVQRISKPLWIVSEDMERDVFMSA
        T EFIL+ E     + T  R+YVQR SKPLW+VSEDMERDVFMSA
Subjt:  TREFILKTE-----KTTFIRIYVQRISKPLWIVSEDMERDVFMSA

A0A5D2KIT1 ATP-dependent Clp protease proteolytic subunit4.2e-0664.44Show/hide
Query:  TREFILKTE-----KTTFIRIYVQRISKPLWIVSEDMERDVFMSA
        TREFIL+ E     + +  R+YVQR S+PLW+VSEDMERDVFMSA
Subjt:  TREFILKTE-----KTTFIRIYVQRISKPLWIVSEDMERDVFMSA

A0A6G9IG04 ATP-dependent Clp protease proteolytic subunit4.2e-0666.67Show/hide
Query:  TREFILKTE-----KTTFIRIYVQRISKPLWIVSEDMERDVFMSA
        T EFIL+ E     + T  R+YVQR SKPLW+VSEDMERDVFMSA
Subjt:  TREFILKTE-----KTTFIRIYVQRISKPLWIVSEDMERDVFMSA

A0A7S6VLF0 Clp protease proteolytic subunit4.2e-0666.67Show/hide
Query:  TREFILKTE-----KTTFIRIYVQRISKPLWIVSEDMERDVFMSA
        T EFIL+ E     + T  R+YVQR SKPLWI+SEDMERDVFMSA
Subjt:  TREFILKTE-----KTTFIRIYVQRISKPLWIVSEDMERDVFMSA

SwissProt top hitse value%identityAlignment
P30063 ATP-dependent Clp protease proteolytic subunit4.3e-0862.22Show/hide
Query:  TREFILKTE-----KTTFIRIYVQRISKPLWIVSEDMERDVFMSA
        T EFIL+ E     + T  R+YVQR  KPLW++SEDMERDVFMSA
Subjt:  TREFILKTE-----KTTFIRIYVQRISKPLWIVSEDMERDVFMSA

Q0G9T7 ATP-dependent Clp protease proteolytic subunit3.3e-0864.44Show/hide
Query:  TREFILKTE-----KTTFIRIYVQRISKPLWIVSEDMERDVFMSA
        T EFIL+ E     + T  R+YVQR  KPLW+VSEDMERDVFMSA
Subjt:  TREFILKTE-----KTTFIRIYVQRISKPLWIVSEDMERDVFMSA

Q3C1K4 ATP-dependent Clp protease proteolytic subunit4.3e-0862.22Show/hide
Query:  TREFILKTE-----KTTFIRIYVQRISKPLWIVSEDMERDVFMSA
        T EF+L+ E     + T  R+YVQR  KPLW+VSEDMERDVFMSA
Subjt:  TREFILKTE-----KTTFIRIYVQRISKPLWIVSEDMERDVFMSA

Q49KX3 ATP-dependent Clp protease proteolytic subunit3.3e-0864.44Show/hide
Query:  TREFILKTE-----KTTFIRIYVQRISKPLWIVSEDMERDVFMSA
        T EFIL+ E     + T  R+YVQR  KPLW+VSEDMERDVFMSA
Subjt:  TREFILKTE-----KTTFIRIYVQRISKPLWIVSEDMERDVFMSA

Q9BBQ9 ATP-dependent Clp protease proteolytic subunit4.3e-0864.44Show/hide
Query:  TREFILKTE-----KTTFIRIYVQRISKPLWIVSEDMERDVFMSA
        T EFIL+ E     + T  R+YVQR  KPLW+VSEDMERDVFMSA
Subjt:  TREFILKTE-----KTTFIRIYVQRISKPLWIVSEDMERDVFMSA

Arabidopsis top hitse value%identityAlignment
ATCG00670.1 plastid-encoded CLP P5.3e-0960Show/hide
Query:  TREFILKTE-----KTTFIRIYVQRISKPLWIVSEDMERDVFMSA
        T EFIL+ E     + T  R+YVQR  KP+W++SEDMERDVFMSA
Subjt:  TREFILKTE-----KTTFIRIYVQRISKPLWIVSEDMERDVFMSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACGAGAGAATTTATCCTAAAAACGGAAAAAACGACCTTCATAAGGATTTATGTACAAAGAATAAGCAAACCCTTATGGATTGTATCCGAAGACATGGAAAGGGATGTTTT
TATGTCAGCA
mRNA sequenceShow/hide mRNA sequence
ACGAGAGAATTTATCCTAAAAACGGAAAAAACGACCTTCATAAGGATTTATGTACAAAGAATAAGCAAACCCTTATGGATTGTATCCGAAGACATGGAAAGGGATGTTTT
TATGTCAGCA
Protein sequenceShow/hide protein sequence
TREFILKTEKTTFIRIYVQRISKPLWIVSEDMERDVFMSA