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MS012541 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012541
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPhospho-N-acetylmuramoyl-pentapeptide-transferase
Genome locationscaffold63:1444774..1445277
RNA-Seq ExpressionMS012541
SyntenyMS012541
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600720.1 hypothetical protein SDJN03_05953, partial [Cucurbita argyrosperma subsp. sororia]6.0e-4871.17Show/hide
Query:  MADGYSKIKAACKFKSRSIDYSDLASLPHSLKFTAAVPNPNSLAHESDQNRANRAR--AQSCLPEEEEDEYGGGGGVAVAALSRNSSVSSSASGLHSAVK
        MAD YSKI+AACK KSRS DYSDL+SLPHSL+F AA  NPNS   +SDQNR NR+R     CLPEEEEDEY        + L RN SVS+SASG HSAVK
Subjt:  MADGYSKIKAACKFKSRSIDYSDLASLPHSLKFTAAVPNPNSLAHESDQNRANRAR--AQSCLPEEEEDEYGGGGGVAVAALSRNSSVSSSASGLHSAVK

Query:  RALSMRRSSSVAERYCRIHDQFATLASPIDDEEIGAGDSKERRKSAGSVRRKKKNAAGKIVRA
        RALSMRRSSSVAERY RIHDQF TLASPIDD+EI   +SKE R + GSVR+KK NAAGKIVRA
Subjt:  RALSMRRSSSVAERYCRIHDQFATLASPIDDEEIGAGDSKERRKSAGSVRRKKKNAAGKIVRA

KAG7015455.1 hypothetical protein SDJN02_23091, partial [Cucurbita argyrosperma subsp. argyrosperma]8.0e-5371.67Show/hide
Query:  MADGYSKIKAACKFKSRSIDYSDLASLPHSLKF--TAAVPNPNSLAHESDQNRANRARAQSCLP------EEEEDEYGGGGGVAVAALSRNSSVSSSASG
        MAD YSKIKAACKFKSRSIDYSDL SLPHS +F   AAV NPNS  H+S++N+ NR  ++  LP      EEEEDEYGG      AALSRN+SVSSS SG
Subjt:  MADGYSKIKAACKFKSRSIDYSDLASLPHSLKF--TAAVPNPNSLAHESDQNRANRARAQSCLP------EEEEDEYGGGGGVAVAALSRNSSVSSSASG

Query:  LHSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDDEEIGAGDSKERRKSAGSV----RRKKKNAAGKIVRACKRLFGL
         HSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDD+E+  GDSKE RK+ GSV    ++KKKN+AGKIVRACKRLFG+
Subjt:  LHSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDDEEIGAGDSKERRKSAGSV----RRKKKNAAGKIVRACKRLFGL

KAG7031359.1 hypothetical protein SDJN02_05399, partial [Cucurbita argyrosperma subsp. argyrosperma]4.7e-5372.35Show/hide
Query:  MADGYSKIKAACKFKSRSIDYSDLASLPHSLKFTAAVPNPNSLAHESDQNRANRAR--AQSCLPEEEEDEYGGGGGVAVAALSRNSSVSSSASGLHSAVK
        MAD YSKI+AACK KSRS+DYSDL+SLPHSL+F AA  NPNS   +SDQNR NR+R     CLPEEEEDEY        + L RN SVS+SASG HSAVK
Subjt:  MADGYSKIKAACKFKSRSIDYSDLASLPHSLKFTAAVPNPNSLAHESDQNRANRAR--AQSCLPEEEEDEYGGGGGVAVAALSRNSSVSSSASGLHSAVK

Query:  RALSMRRSSSVAERYCRIHDQFATLASPIDDEEIGAGDSKERRKSAGSVRRKKKNAAGKIVRACKRLFGL
        RALSMRRSSSVAERY RIHDQF TLASPIDD+EI   +SKE R + GSVR+KK NAAGKIVRACKRLFGL
Subjt:  RALSMRRSSSVAERYCRIHDQFATLASPIDDEEIGAGDSKERRKSAGSVRRKKKNAAGKIVRACKRLFGL

XP_022136741.1 uncharacterized protein LOC111008371 [Momordica charantia]2.4e-8199.4Show/hide
Query:  MADGYSKIKAACKFKSRSIDYSDLASLPHSLKFTAAVPNPNSLAHESDQNRANRARAQSCLPEEEEDEYGGGGGVAVAALSRNSSVSSSASGLHSAVKRA
        MADGYSKIKAACKFKSRSIDYSDLASLPHSLKFTAAVPNPNSLAHESDQNRANRARAQSCLPEEEEDEYGGGGGVAVAALSRNSSVSSSASGLHSAVKRA
Subjt:  MADGYSKIKAACKFKSRSIDYSDLASLPHSLKFTAAVPNPNSLAHESDQNRANRARAQSCLPEEEEDEYGGGGGVAVAALSRNSSVSSSASGLHSAVKRA

Query:  LSMRRSSSVAERYCRIHDQFATLASPIDDEEIGAGDSKERRKSAGSVRRKKKNAAGKIVRACKRLFGL
        LSMRRSSSVAERYCRIHDQFATLASPIDDEEIGAGDSKE RKSAGSVRRKKKNAAGKIVRACKRLFGL
Subjt:  LSMRRSSSVAERYCRIHDQFATLASPIDDEEIGAGDSKERRKSAGSVRRKKKNAAGKIVRACKRLFGL

XP_022929198.1 uncharacterized protein LOC111435863 [Cucurbita moschata]6.8e-5271.11Show/hide
Query:  MADGYSKIKAACKFKSRSIDYSDLASLPHSLKF--TAAVPNPNSLAHESDQNRANRARAQSCLP------EEEEDEYGGGGGVAVAALSRNSSVSSSASG
        MAD YSKIKAACKFKSRSIDYSDL SLPHS +F   AAV NPNS  H+S++N+ NR  ++  LP      EEEEDEYGG      AALSRN+SVSSS SG
Subjt:  MADGYSKIKAACKFKSRSIDYSDLASLPHSLKF--TAAVPNPNSLAHESDQNRANRARAQSCLP------EEEEDEYGGGGGVAVAALSRNSSVSSSASG

Query:  LHSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDDEEIGAGDSKERRKSAGSV----RRKKKNAAGKIVRACKRLFGL
         HSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDD+E+  GDSKE RK+ GSV    ++KKKN+A KIVRACKRLFG+
Subjt:  LHSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDDEEIGAGDSKERRKSAGSV----RRKKKNAAGKIVRACKRLFGL

TrEMBL top hitse value%identityAlignment
A0A0A0L2N9 Uncharacterized protein2.8e-4364.8Show/hide
Query:  MADGYSKIKAACKFKSRSIDYSDLASLPHSLKFTAAVPNPNSLAHESDQNRANRAR--AQSCLPEEEED------EYGGGGGVAVAALSRNSSVSSSASG
        MADGYSKIKAA KFKSRSIDYSDL+SLPHSL F+AAV NP          R NR +      LPEE+E+      +   G   A A L RNSSVSSS SG
Subjt:  MADGYSKIKAACKFKSRSIDYSDLASLPHSLKFTAAVPNPNSLAHESDQNRANRAR--AQSCLPEEEED------EYGGGGGVAVAALSRNSSVSSSASG

Query:  LHSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDDEEIGAGDSKERRKSAGS---VRRKKKNAAGKIVRACKRLFGL
          SAVKRALSMRRSSSVAERYCRIHDQFAT ASPI+D+E+  GD KER K  GS    ++KKKNAA KIVRACKR+FGL
Subjt:  LHSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDDEEIGAGDSKERRKSAGS---VRRKKKNAAGKIVRACKRLFGL

A0A5A7V402 Uncharacterized protein7.4e-4467.63Show/hide
Query:  MADGYSKIKAACKFKSRSIDYSDLASLPHSLKF-TAAVPNPNSLAHESDQNRANRAR--AQSCLPEEEEDEYGG-----GGGVAVAALSRNSSVSSSASG
        MADGYSKIKAACKFKSRSIDYSDL+SLPHSL F  AAV NP  ++H S+ +R NR +      LPEE+E+          GG A A LSRNSSVSSS SG
Subjt:  MADGYSKIKAACKFKSRSIDYSDLASLPHSLKF-TAAVPNPNSLAHESDQNRANRAR--AQSCLPEEEEDEYGG-----GGGVAVAALSRNSSVSSSASG

Query:  LHSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDDEEIGAGDSKERRKSAGSVRRKKK--NAAGKIVRACK
          SAVKRALSMRRSSSVAERYCRIHDQFAT ASPI+D+E+  GDSKER K  GS  +KKK  NAAGKIVRA +
Subjt:  LHSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDDEEIGAGDSKERRKSAGSVRRKKK--NAAGKIVRACK

A0A5N6QLE4 Uncharacterized protein2.1e-2250Show/hide
Query:  DGYSKIKAACKFKSRSIDYSDLASLPHSLKFTAAVPNPNSLAHESDQNRANRARAQSCLPEEEEDEYGGGGGVAVAALSRNSSVSSSASGLHSAVKRALS
        +GYSK+KA    KSRS+D+SD  S   + K  +   +P S  HE  Q + + A        E+ED  GG G    A LSR+ SVSS+ SG  SAVKRA S
Subjt:  DGYSKIKAACKFKSRSIDYSDLASLPHSLKFTAAVPNPNSLAHESDQNRANRARAQSCLPEEEEDEYGGGGGVAVAALSRNSSVSSSASGLHSAVKRALS

Query:  MRRSSSVAERYCRIHDQFATLASPIDDEEIGAGDSKERRKSAGSVRRKKKNAAGKIVRACKRLFGL
        ++RSSSV+ERYCRI+DQ  TLASPIDD++    D+   R +  SV +KKK+  GKI++ACKRLFGL
Subjt:  MRRSSSVAERYCRIHDQFATLASPIDDEEIGAGDSKERRKSAGSVRRKKKNAAGKIVRACKRLFGL

A0A6J1C4C9 uncharacterized protein LOC1110083711.2e-8199.4Show/hide
Query:  MADGYSKIKAACKFKSRSIDYSDLASLPHSLKFTAAVPNPNSLAHESDQNRANRARAQSCLPEEEEDEYGGGGGVAVAALSRNSSVSSSASGLHSAVKRA
        MADGYSKIKAACKFKSRSIDYSDLASLPHSLKFTAAVPNPNSLAHESDQNRANRARAQSCLPEEEEDEYGGGGGVAVAALSRNSSVSSSASGLHSAVKRA
Subjt:  MADGYSKIKAACKFKSRSIDYSDLASLPHSLKFTAAVPNPNSLAHESDQNRANRARAQSCLPEEEEDEYGGGGGVAVAALSRNSSVSSSASGLHSAVKRA

Query:  LSMRRSSSVAERYCRIHDQFATLASPIDDEEIGAGDSKERRKSAGSVRRKKKNAAGKIVRACKRLFGL
        LSMRRSSSVAERYCRIHDQFATLASPIDDEEIGAGDSKE RKSAGSVRRKKKNAAGKIVRACKRLFGL
Subjt:  LSMRRSSSVAERYCRIHDQFATLASPIDDEEIGAGDSKERRKSAGSVRRKKKNAAGKIVRACKRLFGL

A0A6J1ERE9 uncharacterized protein LOC1114358633.3e-5271.11Show/hide
Query:  MADGYSKIKAACKFKSRSIDYSDLASLPHSLKF--TAAVPNPNSLAHESDQNRANRARAQSCLP------EEEEDEYGGGGGVAVAALSRNSSVSSSASG
        MAD YSKIKAACKFKSRSIDYSDL SLPHS +F   AAV NPNS  H+S++N+ NR  ++  LP      EEEEDEYGG      AALSRN+SVSSS SG
Subjt:  MADGYSKIKAACKFKSRSIDYSDLASLPHSLKF--TAAVPNPNSLAHESDQNRANRARAQSCLP------EEEEDEYGGGGGVAVAALSRNSSVSSSASG

Query:  LHSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDDEEIGAGDSKERRKSAGSV----RRKKKNAAGKIVRACKRLFGL
         HSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDD+E+  GDSKE RK+ GSV    ++KKKN+A KIVRACKRLFG+
Subjt:  LHSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDDEEIGAGDSKERRKSAGSV----RRKKKNAAGKIVRACKRLFGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G24275.1 Identified as a screen for stress-responsive genes.9.0e-1047.83Show/hide
Query:  LSRNSSVSSSASGLHSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDDEEIGAGDSKERRKSAGSVRRKKKNAAGK---IVRACKRLFGL
        LSRN SVS+SA  + S +K  +SMRRSSSV+ERYCRI+DQ +    P+   E   GD  E       V +KKK+   K    V+ACKR FG+
Subjt:  LSRNSSVSSSASGLHSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDDEEIGAGDSKERRKSAGSVRRKKKNAAGK---IVRACKRLFGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGATGGCTACTCCAAAATCAAAGCCGCCTGCAAATTCAAGTCCAGATCCATAGATTATTCCGATCTCGCATCGCTCCCTCACTCCCTCAAATTCACCGCCGCCGT
CCCCAATCCGAACTCCCTCGCTCACGAATCCGATCAGAACAGAGCCAATCGGGCGCGGGCGCAGAGCTGCTTGCCGGAGGAGGAGGAAGACGAATACGGCGGCGGCGGAG
GCGTCGCCGTCGCCGCGCTGAGTCGGAACAGCTCTGTTTCTTCTTCCGCATCCGGACTCCATTCGGCGGTGAAGAGAGCTCTGTCGATGCGGAGATCTTCGTCTGTGGCG
GAGCGGTACTGTAGGATTCACGATCAGTTCGCGACGCTTGCATCGCCGATTGACGATGAGGAAATTGGAGCGGGAGATTCCAAAGAAAGGCGAAAATCGGCAGGATCTGT
GAGGAGGAAGAAGAAGAACGCGGCGGGGAAGATCGTTAGAGCCTGTAAGCGGCTGTTTGGACTG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGATGGCTACTCCAAAATCAAAGCCGCCTGCAAATTCAAGTCCAGATCCATAGATTATTCCGATCTCGCATCGCTCCCTCACTCCCTCAAATTCACCGCCGCCGT
CCCCAATCCGAACTCCCTCGCTCACGAATCCGATCAGAACAGAGCCAATCGGGCGCGGGCGCAGAGCTGCTTGCCGGAGGAGGAGGAAGACGAATACGGCGGCGGCGGAG
GCGTCGCCGTCGCCGCGCTGAGTCGGAACAGCTCTGTTTCTTCTTCCGCATCCGGACTCCATTCGGCGGTGAAGAGAGCTCTGTCGATGCGGAGATCTTCGTCTGTGGCG
GAGCGGTACTGTAGGATTCACGATCAGTTCGCGACGCTTGCATCGCCGATTGACGATGAGGAAATTGGAGCGGGAGATTCCAAAGAAAGGCGAAAATCGGCAGGATCTGT
GAGGAGGAAGAAGAAGAACGCGGCGGGGAAGATCGTTAGAGCCTGTAAGCGGCTGTTTGGACTG
Protein sequenceShow/hide protein sequence
MADGYSKIKAACKFKSRSIDYSDLASLPHSLKFTAAVPNPNSLAHESDQNRANRARAQSCLPEEEEDEYGGGGGVAVAALSRNSSVSSSASGLHSAVKRALSMRRSSSVA
ERYCRIHDQFATLASPIDDEEIGAGDSKERRKSAGSVRRKKKNAAGKIVRACKRLFGL