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MS012546 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012546
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold63:1469742..1469990
RNA-Seq ExpressionMS012546
SyntenyMS012546
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060579.1 hypothetical protein E6C27_scaffold22G004510 [Cucumis melo var. makuwa]9.2e-2689.74Show/hide
Query:  LSDDSSTKDSNDSGNHPSSHSNTGSMVAIILLGLLVVLLLSIFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        LSDDSS KDS +SGNHPSS SNTGSMVAIILLG+LV +LLS FLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Subjt:  LSDDSSTKDSNDSGNHPSSHSNTGSMVAIILLGLLVVLLLSIFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

KAE8650189.1 hypothetical protein Csa_011006, partial [Cucumis sativus]1.4e-2686.75Show/hide
Query:  LATTALSDDSSTKDSNDSGNHPSSHSNTGSMVAIILLGLLVVLLLSIFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        L  +ALSDDSS KDS  SGNHPSS S+TGSMVAIILLG+LVV+LLS FLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Subjt:  LATTALSDDSSTKDSNDSGNHPSSHSNTGSMVAIILLGLLVVLLLSIFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

KAG7015450.1 hypothetical protein SDJN02_23086, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-2383.13Show/hide
Query:  LATTALSDDSSTKDSNDSGNHPSSHSNTGSMVAIILLGLLVVLLLSIFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        L  +ALS+DSS KDS +SG H SS S TGSMVAIILLG LVV+LLS FLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Subjt:  LATTALSDDSSTKDSNDSGNHPSSHSNTGSMVAIILLGLLVVLLLSIFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

KAG7031355.1 hypothetical protein SDJN02_05395 [Cucurbita argyrosperma subsp. argyrosperma]3.9e-2484.34Show/hide
Query:  LATTALSDDSSTKDSNDSGNHPSSHSNTGSMVAIILLGLLVVLLLSIFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        L  +ALSDDS+ KDS  SGNHPSS SNT SM+AIILLGLLVV +LS FLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Subjt:  LATTALSDDSSTKDSNDSGNHPSSHSNTGSMVAIILLGLLVVLLLSIFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

XP_016901207.1 PREDICTED: uncharacterized protein LOC103493315 [Cucumis melo]1.4e-2686.75Show/hide
Query:  LATTALSDDSSTKDSNDSGNHPSSHSNTGSMVAIILLGLLVVLLLSIFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        L  +ALSDDSS KDS +SGNHPSS SNTGSMVAIILLG+LV +LLS FLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Subjt:  LATTALSDDSSTKDSNDSGNHPSSHSNTGSMVAIILLGLLVVLLLSIFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

TrEMBL top hitse value%identityAlignment
A0A0A0L5F0 Uncharacterized protein6.9e-2786.75Show/hide
Query:  LATTALSDDSSTKDSNDSGNHPSSHSNTGSMVAIILLGLLVVLLLSIFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        L  +ALSDDSS KDS  SGNHPSS S+TGSMVAIILLG+LVV+LLS FLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Subjt:  LATTALSDDSSTKDSNDSGNHPSSHSNTGSMVAIILLGLLVVLLLSIFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

A0A1S4DZ07 uncharacterized protein LOC1034933156.9e-2786.75Show/hide
Query:  LATTALSDDSSTKDSNDSGNHPSSHSNTGSMVAIILLGLLVVLLLSIFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        L  +ALSDDSS KDS +SGNHPSS SNTGSMVAIILLG+LV +LLS FLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Subjt:  LATTALSDDSSTKDSNDSGNHPSSHSNTGSMVAIILLGLLVVLLLSIFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

A0A5A7V4C4 Uncharacterized protein4.5e-2689.74Show/hide
Query:  LSDDSSTKDSNDSGNHPSSHSNTGSMVAIILLGLLVVLLLSIFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        LSDDSS KDS +SGNHPSS SNTGSMVAIILLG+LV +LLS FLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Subjt:  LSDDSSTKDSNDSGNHPSSHSNTGSMVAIILLGLLVVLLLSIFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

A0A6J1EUP1 uncharacterized protein LOC1114360825.5e-2483.13Show/hide
Query:  LATTALSDDSSTKDSNDSGNHPSSHSNTGSMVAIILLGLLVVLLLSIFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        L  +ALS+DSS KDS +SG H SS S TGSMVAIILLG LVV+LLS FLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Subjt:  LATTALSDDSSTKDSNDSGNHPSSHSNTGSMVAIILLGLLVVLLLSIFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

A0A6J1J6C2 uncharacterized protein LOC1114829875.5e-2483.13Show/hide
Query:  LATTALSDDSSTKDSNDSGNHPSSHSNTGSMVAIILLGLLVVLLLSIFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        L  +ALS+DSS KDS +SG H SS S TGSMVAIILLG LVV+LLS FLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Subjt:  LATTALSDDSSTKDSNDSGNHPSSHSNTGSMVAIILLGLLVVLLLSIFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G09645.1 unknown protein1.1e-1658.97Show/hide
Query:  LSDDSSTKDSNDSGNHPSSHSNTGSMVAIILLGLLVVLLLSIFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        LS DS   ++       +S S TG+ V ++L+G + V + S FL+KLWQKK+R+EQYARLLKLFEEDDELEVELGLRD
Subjt:  LSDDSSTKDSNDSGNHPSSHSNTGSMVAIILLGLLVVLLLSIFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

AT1G57765.1 unknown protein7.1e-1660.26Show/hide
Query:  LSDDSSTKDSNDSGNHPSSHSNTGSMVAIILLGLLVVLLLSIFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        +S D ++  +       +S S TG+ V  ILLG   V  LS FL+KLWQKK+R+EQYARLLKLFEEDDELEVELGLRD
Subjt:  LSDDSSTKDSNDSGNHPSSHSNTGSMVAIILLGLLVVLLLSIFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

AT1G57765.2 unknown protein7.1e-1660.26Show/hide
Query:  LSDDSSTKDSNDSGNHPSSHSNTGSMVAIILLGLLVVLLLSIFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        +S D ++  +       +S S TG+ V  ILLG   V  LS FL+KLWQKK+R+EQYARLLKLFEEDDELEVELGLRD
Subjt:  LSDDSSTKDSNDSGNHPSSHSNTGSMVAIILLGLLVVLLLSIFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

AT3G53490.1 unknown protein3.3e-0538.16Show/hide
Query:  DDSSTKDSNDSGNHPSSHSNTGSMVAIILLGLLVVLLLSIFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        +  + K+    G HP      G +V I++L L VV +  +  +K W+KK+R+++ AR LKLFE+ D++E ELGL +
Subjt:  DDSSTKDSNDSGNHPSSHSNTGSMVAIILLGLLVVLLLSIFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGGCTACTACAGCCCTTTCTGATGACTCCAGTACCAAAGATAGTAATGACTCTGGGAATCATCCATCCTCCCACAGCAACACTGGCTCGATGGTTGCCATCATACTCCT
TGGGCTTTTGGTAGTTTTGTTATTATCAATTTTCCTTTTCAAATTATGGCAAAAGAAGAGAAGAGAGGAGCAGTATGCCCGACTTCTGAAATTGTTTGAAGAAGATGATG
AGCTCGAGGTTGAACTTGGTCTTCGGGAT
mRNA sequenceShow/hide mRNA sequence
TTGGCTACTACAGCCCTTTCTGATGACTCCAGTACCAAAGATAGTAATGACTCTGGGAATCATCCATCCTCCCACAGCAACACTGGCTCGATGGTTGCCATCATACTCCT
TGGGCTTTTGGTAGTTTTGTTATTATCAATTTTCCTTTTCAAATTATGGCAAAAGAAGAGAAGAGAGGAGCAGTATGCCCGACTTCTGAAATTGTTTGAAGAAGATGATG
AGCTCGAGGTTGAACTTGGTCTTCGGGAT
Protein sequenceShow/hide protein sequence
LATTALSDDSSTKDSNDSGNHPSSHSNTGSMVAIILLGLLVVLLLSIFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD