; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS012559 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012559
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzinc finger CCCH domain-containing protein 5
Genome locationscaffold63:1535385..1536665
RNA-Seq ExpressionMS012559
SyntenyMS012559
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0089701 - U2AF (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000571 - Zinc finger, CCCH-type
IPR009145 - U2 auxiliary factor small subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577355.1 Zinc finger CCCH domain-containing protein 5, partial [Cucurbita argyrosperma subsp. sororia]2.2e-12284.78Show/hide
Query:  MEEPKFEGEEEEKPQVGIEAGPLEKPCLTKNLCRKEKRKALKKMKRKQLRKEVALKKLQEEEARSNDPDEQRRIRLMELEEEERSERERKLFEERERAWM
        MEEP+F GEEEEKPQ G EAG +EKPC  +NLCRKEKRKALKK+KRKQLRKE ALKKLQEEEAR NDP+EQRRIRLMELEEEERSERERKLFEERERAW+
Subjt:  MEEPKFEGEEEEKPQVGIEAGPLEKPCLTKNLCRKEKRKALKKMKRKQLRKEVALKKLQEEEARSNDPDEQRRIRLMELEEEERSERERKLFEERERAWM

Query:  EVMELKMKKMAEEEEEEQRRSVLEEESTAPQDENENEFGEEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKSVEPQKSLEDAHRPTSNPLPPQSEAFTD
        E MELK K MAEEEEEEQRR  LEEESTA Q ENENE  EEDGWEYIEGPAEVIWKG+EIILKKKLIKVPKK VEP+KSLEDAHRPTSNPLPPQSE  TD
Subjt:  EVMELKMKKMAEEEEEEQRRSVLEEESTAPQDENENEFGEEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKSVEPQKSLEDAHRPTSNPLPPQSEAFTD

Query:  YKDATISSRQVIEDVASQVPNFGTEQASLSLSLFSSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGLAWEQDEGLE
         K+A IS+RQVI+DVASQVPNFGTEQ          DKSHCPFHLKTGACRFGQRCSRIHFYPD SCTLLIKNMYNGPGLAWEQDEGLE
Subjt:  YKDATISSRQVIEDVASQVPNFGTEQASLSLSLFSSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGLAWEQDEGLE

XP_022136848.1 zinc finger CCCH domain-containing protein 5 [Momordica charantia]5.5e-14295.16Show/hide
Query:  MEEPKFEGEEEEKPQVGIEAGPLEKPCLTKNLCRKEKRKALKKMKRKQLRKEVALKKLQEEEARSNDPDEQRRIRLMELEEEERSERERKLFEERERAWM
        MEEPKFEGEEEEKPQVGIEAGPLEKPCLTKNLCRKEKRKALKKMKRKQLRKEVALKKLQEEEARSNDPDEQRRIRLMELEEEERSERERK FEERERAWM
Subjt:  MEEPKFEGEEEEKPQVGIEAGPLEKPCLTKNLCRKEKRKALKKMKRKQLRKEVALKKLQEEEARSNDPDEQRRIRLMELEEEERSERERKLFEERERAWM

Query:  EVMELKMKKMAEEEEEEQRRSVLEEESTAPQDENENEFGEEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKSVEPQKSLEDAHRPTSNPLPPQSEAFTD
        EVMELK K MAEEEEEEQRRSVLEEESTAPQDENENEFGEEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKSVEPQKSLEDAHRPTSNPLPPQSEAFTD
Subjt:  EVMELKMKKMAEEEEEEQRRSVLEEESTAPQDENENEFGEEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKSVEPQKSLEDAHRPTSNPLPPQSEAFTD

Query:  YKDATISSRQVIEDVASQVPNFGTEQASLSLSLFSSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGLAWEQDEGLE
        YK+ATISSRQVIEDVASQVPNFGTEQ          DKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGLAWEQDEGLE
Subjt:  YKDATISSRQVIEDVASQVPNFGTEQASLSLSLFSSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGLAWEQDEGLE

XP_022929398.1 zinc finger CCCH domain-containing protein 5 [Cucurbita moschata]1.1e-12184.83Show/hide
Query:  MEEPKFEGEEEEKPQVGIEAGPLEKPCLTKNLCRKEKRKALKKMKRKQLRKEVALKKLQEEEARSNDPDEQRRIRLMELEEEERSERERKLFEERERAWM
        MEEP+F GEEEEKPQ G EAG +EKPC  +NLCRKEKRKALKK+KRKQLRKE ALKKLQEEEAR NDP+EQRRIRLMELEEEERSERERKLFEERERAW+
Subjt:  MEEPKFEGEEEEKPQVGIEAGPLEKPCLTKNLCRKEKRKALKKMKRKQLRKEVALKKLQEEEARSNDPDEQRRIRLMELEEEERSERERKLFEERERAWM

Query:  EVMEL-KMKKMAEEEEEEQRRSVLEEESTAPQDENENEFGEEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKSVEPQKSLEDAHRPTSNPLPPQSEAFT
        E MEL K KKMAEEEEEEQRR  LEEESTA Q ENENE  EEDGWEYIEGPAEVIWKG+EIILKKKLIKVPKK VEP+KSLEDAHRPTSNPLPPQSE  T
Subjt:  EVMEL-KMKKMAEEEEEEQRRSVLEEESTAPQDENENEFGEEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKSVEPQKSLEDAHRPTSNPLPPQSEAFT

Query:  DYKDATISSRQVIEDVASQVPNFGTEQASLSLSLFSSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGLAWEQDEGLE
        D K+A IS+RQVI+DVASQVPNFGTEQ          DKSHCPFHLKTGACRFGQRCSRIHFYPD SCTLLIKNMYNGPGLAWEQDEGLE
Subjt:  DYKDATISSRQVIEDVASQVPNFGTEQASLSLSLFSSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGLAWEQDEGLE

XP_022984571.1 zinc finger CCCH domain-containing protein 5 [Cucurbita maxima]8.8e-12485.12Show/hide
Query:  MEEPKFEGEEEEKPQVGIEAGPLEKPCLTKNLCRKEKRKALKKMKRKQLRKEVALKKLQEEEARSNDPDEQRRIRLMELEEEERSERERKLFEERERAWM
        M+EP+F GEEEEKPQ G EAGPLEKPC  +NLCRKEKRKALKK+KRKQLRKE ALKKLQEEE R NDP+E+RRIRLMELEEEERSERERKLFEERERAW+
Subjt:  MEEPKFEGEEEEKPQVGIEAGPLEKPCLTKNLCRKEKRKALKKMKRKQLRKEVALKKLQEEEARSNDPDEQRRIRLMELEEEERSERERKLFEERERAWM

Query:  EVMELKMKKMAEEEEEEQRRSVLEEESTAPQDENENEFGEEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKSVEPQKSLEDAHRPTSNPLPPQSEAFTD
        E MELK KKMAEEEEEEQRR  LEEESTA Q ENENE  EEDGWEYIEGPAEVIWKGEEIILKKKLIK+PKK VEP+KSLEDAHRPTSNPLPPQSE FTD
Subjt:  EVMELKMKKMAEEEEEEQRRSVLEEESTAPQDENENEFGEEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKSVEPQKSLEDAHRPTSNPLPPQSEAFTD

Query:  YKDATISSRQVIEDVASQVPNFGTEQASLSLSLFSSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGLAWEQDEGLE
         K+A IS+RQVI+DVASQVPNFGTEQ          DKSHCPFHLKTGACRFGQRCSRIHFYPD SCTLLIKNMYNGPGLAWEQDEGLE
Subjt:  YKDATISSRQVIEDVASQVPNFGTEQASLSLSLFSSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGLAWEQDEGLE

XP_023552003.1 zinc finger CCCH domain-containing protein 5 [Cucurbita pepo subsp. pepo]5.9e-12083.79Show/hide
Query:  MEEPKFEGEEEEKPQVGIEAGPLEKPCLTKNLCRKEKRKALKKMKRKQLRKEVALKKLQEEEARSNDPDEQRRIRLMELEEEERSERERKLFEERERAWM
        MEEP+F GEEEEKPQ G EAG +EKPC  +NLCRKEKRKALKK+KRKQLRKE ALKKLQEEEA+ NDP+EQRRIRLMELEEEERSERERKLFEERERAW+
Subjt:  MEEPKFEGEEEEKPQVGIEAGPLEKPCLTKNLCRKEKRKALKKMKRKQLRKEVALKKLQEEEARSNDPDEQRRIRLMELEEEERSERERKLFEERERAWM

Query:  EVMELKMKKMA-EEEEEEQRRSVLEEESTAPQDENENEFGEEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKSVEPQKSLEDAHRPTSNPLPPQSEAFT
        E MELK KKMA EEEEEEQRR  LEEESTA Q ENENE   EDGWEYIEGPAEVIWKG+EIILKKKLIKVPKK VEP+KSLED HRPTSNPLPPQSE  T
Subjt:  EVMELKMKKMA-EEEEEEQRRSVLEEESTAPQDENENEFGEEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKSVEPQKSLEDAHRPTSNPLPPQSEAFT

Query:  DYKDATISSRQVIEDVASQVPNFGTEQASLSLSLFSSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGLAWEQDEGLE
        D K+A IS+RQVI+DVASQVPNFGTEQ          DKSHCPFHLKTGACRFGQRCSRIHFYPD SCTLLIKNMYNGPGLAWEQDEGLE
Subjt:  DYKDATISSRQVIEDVASQVPNFGTEQASLSLSLFSSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGLAWEQDEGLE

TrEMBL top hitse value%identityAlignment
A0A1S3BUH0 zinc finger CCCH domain-containing protein 56.0e-11881.02Show/hide
Query:  MEEPKFEG------EEEEKPQVGIEAGPLEKPCLTKNLCRKEKRKALKKMKRKQLRKEVALKKLQEEEARSNDPDEQRRIRLMELEEEERSERERKLFEE
        MEEPK  G      EEEE+ +V        KPC   NLCRKEKRKALKK+KRKQLRKE+ALK+LQEEEAR NDP+EQRR++LMELEEEERSERERKLFEE
Subjt:  MEEPKFEG------EEEEKPQVGIEAGPLEKPCLTKNLCRKEKRKALKKMKRKQLRKEVALKKLQEEEARSNDPDEQRRIRLMELEEEERSERERKLFEE

Query:  RERAWMEVMELKMKKMAEEEEEEQRRSVLEEESTAPQDENENEFGEEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKSVEPQKSLEDAHRPTSNPLPPQ
        RERAWME MELK KKMAEEEEEEQ+R  LEEEST  Q ENENEF EEDGWEYIEGPAE+IWKGEEIILKKKLIKVPKK VEP+KSLEDAHRPTSNPLPPQ
Subjt:  RERAWMEVMELKMKKMAEEEEEEQRRSVLEEESTAPQDENENEFGEEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKSVEPQKSLEDAHRPTSNPLPPQ

Query:  SEAFTDYKDATISSRQVIEDVASQVPNFGTEQASLSLSLFSSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGLAWEQDEGLE
        SEAFTDYK+  IS+RQVIEDVASQVPNFGTEQ          DKSHCPFHLKTGACRFGQRCSRIHFYPD SCTLLIKNMYNGPGLAWEQDEGLE
Subjt:  SEAFTDYKDATISSRQVIEDVASQVPNFGTEQASLSLSLFSSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGLAWEQDEGLE

A0A5D3BNF0 Zinc finger CCCH domain-containing protein 58.3e-11286.67Show/hide
Query:  KEKRKALKKMKRKQLRKEVALKKLQEEEARSNDPDEQRRIRLMELEEEERSERERKLFEERERAWMEVMELKMKKMAEEEEEEQRRSVLEEESTAPQDEN
        KEKRKALKK+KRKQLRKE+ALK+LQEEEAR NDP+EQRR++LMELEEEERSERERKLFEERERAWME MELK KKMAEEEEEEQ+R  LEEEST  Q EN
Subjt:  KEKRKALKKMKRKQLRKEVALKKLQEEEARSNDPDEQRRIRLMELEEEERSERERKLFEERERAWMEVMELKMKKMAEEEEEEQRRSVLEEESTAPQDEN

Query:  ENEFGEEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKSVEPQKSLEDAHRPTSNPLPPQSEAFTDYKDATISSRQVIEDVASQVPNFGTEQASLSLSLF
        ENEF EEDGWEYIEGPAE+IWKGEEIILKKKLIKVPKK VEP+KSLEDAHRPTSNPLPPQSEAFTDYK+  IS+RQVIEDVASQVPNFGTEQ        
Subjt:  ENEFGEEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKSVEPQKSLEDAHRPTSNPLPPQSEAFTDYKDATISSRQVIEDVASQVPNFGTEQASLSLSLF

Query:  SSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGLAWEQDEGLE
          DKSHCPFHLKTGACRFGQRCSRIHFYPD SCTLLIKNMYNGPGLAWEQDEGLE
Subjt:  SSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGLAWEQDEGLE

A0A6J1C8M8 zinc finger CCCH domain-containing protein 52.7e-14295.16Show/hide
Query:  MEEPKFEGEEEEKPQVGIEAGPLEKPCLTKNLCRKEKRKALKKMKRKQLRKEVALKKLQEEEARSNDPDEQRRIRLMELEEEERSERERKLFEERERAWM
        MEEPKFEGEEEEKPQVGIEAGPLEKPCLTKNLCRKEKRKALKKMKRKQLRKEVALKKLQEEEARSNDPDEQRRIRLMELEEEERSERERK FEERERAWM
Subjt:  MEEPKFEGEEEEKPQVGIEAGPLEKPCLTKNLCRKEKRKALKKMKRKQLRKEVALKKLQEEEARSNDPDEQRRIRLMELEEEERSERERKLFEERERAWM

Query:  EVMELKMKKMAEEEEEEQRRSVLEEESTAPQDENENEFGEEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKSVEPQKSLEDAHRPTSNPLPPQSEAFTD
        EVMELK K MAEEEEEEQRRSVLEEESTAPQDENENEFGEEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKSVEPQKSLEDAHRPTSNPLPPQSEAFTD
Subjt:  EVMELKMKKMAEEEEEEQRRSVLEEESTAPQDENENEFGEEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKSVEPQKSLEDAHRPTSNPLPPQSEAFTD

Query:  YKDATISSRQVIEDVASQVPNFGTEQASLSLSLFSSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGLAWEQDEGLE
        YK+ATISSRQVIEDVASQVPNFGTEQ          DKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGLAWEQDEGLE
Subjt:  YKDATISSRQVIEDVASQVPNFGTEQASLSLSLFSSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGLAWEQDEGLE

A0A6J1ERZ7 zinc finger CCCH domain-containing protein 55.2e-12284.83Show/hide
Query:  MEEPKFEGEEEEKPQVGIEAGPLEKPCLTKNLCRKEKRKALKKMKRKQLRKEVALKKLQEEEARSNDPDEQRRIRLMELEEEERSERERKLFEERERAWM
        MEEP+F GEEEEKPQ G EAG +EKPC  +NLCRKEKRKALKK+KRKQLRKE ALKKLQEEEAR NDP+EQRRIRLMELEEEERSERERKLFEERERAW+
Subjt:  MEEPKFEGEEEEKPQVGIEAGPLEKPCLTKNLCRKEKRKALKKMKRKQLRKEVALKKLQEEEARSNDPDEQRRIRLMELEEEERSERERKLFEERERAWM

Query:  EVMEL-KMKKMAEEEEEEQRRSVLEEESTAPQDENENEFGEEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKSVEPQKSLEDAHRPTSNPLPPQSEAFT
        E MEL K KKMAEEEEEEQRR  LEEESTA Q ENENE  EEDGWEYIEGPAEVIWKG+EIILKKKLIKVPKK VEP+KSLEDAHRPTSNPLPPQSE  T
Subjt:  EVMEL-KMKKMAEEEEEEQRRSVLEEESTAPQDENENEFGEEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKSVEPQKSLEDAHRPTSNPLPPQSEAFT

Query:  DYKDATISSRQVIEDVASQVPNFGTEQASLSLSLFSSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGLAWEQDEGLE
        D K+A IS+RQVI+DVASQVPNFGTEQ          DKSHCPFHLKTGACRFGQRCSRIHFYPD SCTLLIKNMYNGPGLAWEQDEGLE
Subjt:  DYKDATISSRQVIEDVASQVPNFGTEQASLSLSLFSSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGLAWEQDEGLE

A0A6J1J5M6 zinc finger CCCH domain-containing protein 54.3e-12485.12Show/hide
Query:  MEEPKFEGEEEEKPQVGIEAGPLEKPCLTKNLCRKEKRKALKKMKRKQLRKEVALKKLQEEEARSNDPDEQRRIRLMELEEEERSERERKLFEERERAWM
        M+EP+F GEEEEKPQ G EAGPLEKPC  +NLCRKEKRKALKK+KRKQLRKE ALKKLQEEE R NDP+E+RRIRLMELEEEERSERERKLFEERERAW+
Subjt:  MEEPKFEGEEEEKPQVGIEAGPLEKPCLTKNLCRKEKRKALKKMKRKQLRKEVALKKLQEEEARSNDPDEQRRIRLMELEEEERSERERKLFEERERAWM

Query:  EVMELKMKKMAEEEEEEQRRSVLEEESTAPQDENENEFGEEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKSVEPQKSLEDAHRPTSNPLPPQSEAFTD
        E MELK KKMAEEEEEEQRR  LEEESTA Q ENENE  EEDGWEYIEGPAEVIWKGEEIILKKKLIK+PKK VEP+KSLEDAHRPTSNPLPPQSE FTD
Subjt:  EVMELKMKKMAEEEEEEQRRSVLEEESTAPQDENENEFGEEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKSVEPQKSLEDAHRPTSNPLPPQSEAFTD

Query:  YKDATISSRQVIEDVASQVPNFGTEQASLSLSLFSSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGLAWEQDEGLE
         K+A IS+RQVI+DVASQVPNFGTEQ          DKSHCPFHLKTGACRFGQRCSRIHFYPD SCTLLIKNMYNGPGLAWEQDEGLE
Subjt:  YKDATISSRQVIEDVASQVPNFGTEQASLSLSLFSSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGLAWEQDEGLE

SwissProt top hitse value%identityAlignment
Q15695 Putative U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 12.0e-0628.41Show/hide
Query:  LEKPCLTKNLCRKEK------RKALKKMKRKQLRKEVALKKLQEEEARSNDPDEQRRIRLMELEEEERSERERKLFEERERAWMEVMELKMKKMAEEEEE
        LEK    K +   EK      R ALKK KRK+ R+E+A  +   +   S + +E   I   +LEEE+  ERER+   E    W+         + E++ +
Subjt:  LEKPCLTKNLCRKEK------RKALKKMKRKQLRKEVALKKLQEEEARSNDPDEQRRIRLMELEEEERSERERKLFEERERAWMEVMELKMKKMAEEEEE

Query:  EQRRSVLEEESTAPQDENENEFGEEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKSVEPQKSLEDAHRPTSNPLPPQSEAFTDYKDATISSRQVIEDVA
        E+ R   E+E  A +   E E   ++ W+  +       + ++   K+K   V K   + +  LE++     NP PP                       
Subjt:  EQRRSVLEEESTAPQDENENEFGEEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKSVEPQKSLEDAHRPTSNPLPPQSEAFTDYKDATISSRQVIEDVA

Query:  SQVPNFGTEQASLSLSLFSSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGL
                    +   +   D+++CPF+ KTGACRFG RCSR H +P +S TLLIK+M+   G+
Subjt:  SQVPNFGTEQASLSLSLFSSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGL

Q15696 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 22.4e-0728.02Show/hide
Query:  EKPCLTKNLCRKEKRKALKKMKRKQLRKEVALKKLQEEEARSNDPDEQRRIRLMELEEEERSERERKLFEERERAWMEVMELKMKKMAEEEEEEQRRSVL
        EK    +    K+ R ALKK KRK+ R+E+A  +L++      + +E   I   +LEEE+  ERER+   E    W+         + E++ +E+ R   
Subjt:  EKPCLTKNLCRKEKRKALKKMKRKQLRKEVALKKLQEEEARSNDPDEQRRIRLMELEEEERSERERKLFEERERAWMEVMELKMKKMAEEEEEEQRRSVL

Query:  EEESTAPQDENENEFGEEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKSVEPQKSLEDAHRPTSNPLPPQSEAFTDYKDATISSRQVIEDVASQVPNFG
        E+E  A + + E E   ++ WE  +       + E    ++K  +  +K    QK L+ A     N    Q+                            
Subjt:  EEESTAPQDENENEFGEEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKSVEPQKSLEDAHRPTSNPLPPQSEAFTDYKDATISSRQVIEDVASQVPNFG

Query:  TEQASLSLSLFSSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGL
          +  +   +   D+++CPF+ KTGACRFG RCSR H +P +S TLLIK+M+   G+
Subjt:  TEQASLSLSLFSSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGL

Q62377 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 23.5e-0628.51Show/hide
Query:  KEKRKALKKMKRKQLRKEVALKKLQEEEARSNDPDEQRRIRLMELEEEERSERERKLFEERERAWMEVMELKMKKMAEEEEEEQRRSVLEEESTAPQDEN
        ++K  AL+K +R++ R++ AL +L+E E    + +E        L EE+R E ER L EER+R   E + L+ +K  EE   ++++   EEE+   ++E 
Subjt:  KEKRKALKKMKRKQLRKEVALKKLQEEEARSNDPDEQRRIRLMELEEEERSERERKLFEERERAWMEVMELKMKKMAEEEEEEQRRSVLEEESTAPQDEN

Query:  ENEFGEEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKSVEPQKSLEDAHRPTSNPLPPQSEAFTDYKDATISSRQVIEDVASQVPNFGTEQ---ASLSL
        E +   E             W+ ++           ++  E QK  E   R                     + +++++   +++ N GT Q     + +
Subjt:  ENEFGEEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKSVEPQKSLEDAHRPTSNPLPPQSEAFTDYKDATISSRQVIEDVASQVPNFGTEQ---ASLSL

Query:  SLFSSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGL
         +   D+++CPF+ KTGACRFG RCSR H +P +S TLLIK M+   G+
Subjt:  SLFSSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGL

Q6YVX9 Zinc finger CCCH domain-containing protein 164.1e-3941.63Show/hide
Query:  RKEKRKALKKMKRKQLRKEVALKKLQEEEARSNDPDEQRRIRLMELEEEERSERERKLFEERERAWMEVMELKMKKMAEEEEEEQRRSVLEEESTAPQDE
        RKE+R+  KK +R++ R+E A    +  EA + DP+E+RR+R +E  E + SER R+ FE+ ER W+E    +  + A    EE   +  E+ S   +D+
Subjt:  RKEKRKALKKMKRKQLRKEVALKKLQEEEARSNDPDEQRRIRLMELEEEERSERERKLFEERERAWMEVMELKMKKMAEEEEEEQRRSVLEEESTAPQDE

Query:  NENEFGEEDGWEYIE-GPAEVIWKGEEIILKKKLIKVPKKSVEPQKSLEDAHRPTSNPLPPQSEAFTDYKDATISSRQVIEDVASQVPNFGTEQASLSLS
        + N   E+D WEY+E GPAE+IW+G EI +KKK++KVPKK+ E Q                                                       
Subjt:  NENEFGEEDGWEYIE-GPAEVIWKGEEIILKKKLIKVPKKSVEPQKSLEDAHRPTSNPLPPQSEAFTDYKDATISSRQVIEDVASQVPNFGTEQASLSLS

Query:  LFSSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGLAWEQDEGLE
            DK+HCPFHLKTGACRFG RCSR+HFYPD SCTLL++NMY+GPGLA EQDEGLE
Subjt:  LFSSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGLAWEQDEGLE

Q9SY74 Zinc finger CCCH domain-containing protein 51.1e-6553.11Show/hide
Query:  MEEPKFEGEEEEKPQVGIEAGPLEKPC-LTKNLCRKEKRKALKKMKRKQLRKEVALKKLQEEEARSNDPDEQRRIRLMELEEEERSERERKLFEERERAW
        ME+   + EEE   +   E    E+       + RKEKRKA+KK+KRKQ+RKE+A K+ +E +A+ NDP EQ R++ +E E+  R E+E K FEE ERAW
Subjt:  MEEPKFEGEEEEKPQVGIEAGPLEKPC-LTKNLCRKEKRKALKKMKRKQLRKEVALKKLQEEEARSNDPDEQRRIRLMELEEEERSERERKLFEERERAW

Query:  MEVMELKMKKMAEEE---EEEQRRSVLEEESTAPQDENENEFGE-EDG-WEYI-EGPAEVIWKGEEIILKKKLIKVPKKSV---------EPQKSLEDAH
         E ME+K KK  EEE   EEE+RR    EE    +    +E GE EDG +EYI EGP E+I++G EIILKK  ++VPKKSV           +  L+ + 
Subjt:  MEVMELKMKKMAEEE---EEEQRRSVLEEESTAPQDENENEFGE-EDG-WEYI-EGPAEVIWKGEEIILKKKLIKVPKKSV---------EPQKSLEDAH

Query:  RPTSNPLPPQSEAFTDYKDATISSRQVIEDVASQVPNFGTEQASLSLSLFSSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGLAWEQ
        RPTSNPLPP SEA  +Y++ + S++Q++E VA +VPNFGTEQ          DK+HCPFHLKTGACRFGQRCSR+HFYP+ SCTLL+KNMYNGPG+ WEQ
Subjt:  RPTSNPLPPQSEAFTDYKDATISSRQVIEDVASQVPNFGTEQASLSLSLFSSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGLAWEQ

Query:  DEGLE
        DEGLE
Subjt:  DEGLE

Arabidopsis top hitse value%identityAlignment
AT1G10320.1 Zinc finger C-x8-C-x5-C-x3-H type family protein8.1e-6753.11Show/hide
Query:  MEEPKFEGEEEEKPQVGIEAGPLEKPC-LTKNLCRKEKRKALKKMKRKQLRKEVALKKLQEEEARSNDPDEQRRIRLMELEEEERSERERKLFEERERAW
        ME+   + EEE   +   E    E+       + RKEKRKA+KK+KRKQ+RKE+A K+ +E +A+ NDP EQ R++ +E E+  R E+E K FEE ERAW
Subjt:  MEEPKFEGEEEEKPQVGIEAGPLEKPC-LTKNLCRKEKRKALKKMKRKQLRKEVALKKLQEEEARSNDPDEQRRIRLMELEEEERSERERKLFEERERAW

Query:  MEVMELKMKKMAEEE---EEEQRRSVLEEESTAPQDENENEFGE-EDG-WEYI-EGPAEVIWKGEEIILKKKLIKVPKKSV---------EPQKSLEDAH
         E ME+K KK  EEE   EEE+RR    EE    +    +E GE EDG +EYI EGP E+I++G EIILKK  ++VPKKSV           +  L+ + 
Subjt:  MEVMELKMKKMAEEE---EEEQRRSVLEEESTAPQDENENEFGE-EDG-WEYI-EGPAEVIWKGEEIILKKKLIKVPKKSV---------EPQKSLEDAH

Query:  RPTSNPLPPQSEAFTDYKDATISSRQVIEDVASQVPNFGTEQASLSLSLFSSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGLAWEQ
        RPTSNPLPP SEA  +Y++ + S++Q++E VA +VPNFGTEQ          DK+HCPFHLKTGACRFGQRCSR+HFYP+ SCTLL+KNMYNGPG+ WEQ
Subjt:  RPTSNPLPPQSEAFTDYKDATISSRQVIEDVASQVPNFGTEQASLSLSLFSSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGLAWEQ

Query:  DEGLE
        DEGLE
Subjt:  DEGLE

AT1G27650.1 U2 snRNP auxiliary factor small subunit, putative4.5e-0947.46Show/hide
Query:  FGTEQASLSLSLFSSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGL
        FGTE+          D+ +CPF+ K GACR G RCSR+H  P  S TLL+ NMY  P +
Subjt:  FGTEQASLSLSLFSSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGL

AT5G42820.1 Zinc finger C-x8-C-x5-C-x3-H type family protein4.5e-0947.46Show/hide
Query:  FGTEQASLSLSLFSSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGL
        FGTE+          D+ +CPF+ K GACR G RCSR+H  P  S TLL+ NMY  P +
Subjt:  FGTEQASLSLSLFSSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGL

AT5G42820.2 Zinc finger C-x8-C-x5-C-x3-H type family protein4.5e-0947.46Show/hide
Query:  FGTEQASLSLSLFSSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGL
        FGTE+          D+ +CPF+ K GACR G RCSR+H  P  S TLL+ NMY  P +
Subjt:  FGTEQASLSLSLFSSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAACCTAAATTCGAAGGAGAAGAAGAAGAGAAGCCTCAGGTGGGTATTGAAGCTGGCCCGCTTGAGAAGCCATGTTTGACAAAGAATCTGTGCAGGAAGGAGAA
GAGGAAGGCGTTGAAGAAGATGAAACGGAAGCAATTAAGGAAAGAGGTAGCACTGAAAAAGCTCCAGGAAGAGGAGGCGCGGTCGAACGATCCTGATGAGCAGAGGAGGA
TCCGGTTGATGGAGCTGGAGGAAGAGGAGAGGTCGGAGAGGGAGAGGAAGCTCTTCGAGGAGCGGGAGAGAGCGTGGATGGAGGTCATGGAGTTGAAGATGAAGAAGATG
GCTGAGGAGGAAGAGGAGGAGCAGCGAAGGAGCGTGTTGGAGGAAGAATCGACGGCGCCGCAGGATGAAAATGAAAATGAGTTTGGTGAGGAAGATGGTTGGGAATACAT
AGAAGGGCCTGCAGAAGTAATCTGGAAAGGAGAAGAGATAATTCTGAAGAAGAAACTAATTAAGGTTCCTAAGAAGAGTGTTGAACCTCAGAAAAGCCTAGAGGATGCTC
ATAGGCCTACGTCAAACCCTCTTCCTCCACAATCTGAAGCTTTTACAGATTATAAGGATGCAACAATTTCATCTAGACAAGTGATTGAGGATGTTGCAAGCCAAGTGCCA
AATTTTGGAACGGAACAGGCATCTCTCTCTCTTTCTCTCTTTTCCTCTGATAAATCACATTGTCCATTCCATCTAAAAACTGGAGCTTGTCGATTTGGTCAGCGTTGTAG
CAGAATTCACTTCTACCCTGACAATTCATGTACATTGCTTATCAAGAACATGTACAATGGTCCTGGCCTTGCTTGGGAGCAAGACGAGGGGCTGGAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAACCTAAATTCGAAGGAGAAGAAGAAGAGAAGCCTCAGGTGGGTATTGAAGCTGGCCCGCTTGAGAAGCCATGTTTGACAAAGAATCTGTGCAGGAAGGAGAA
GAGGAAGGCGTTGAAGAAGATGAAACGGAAGCAATTAAGGAAAGAGGTAGCACTGAAAAAGCTCCAGGAAGAGGAGGCGCGGTCGAACGATCCTGATGAGCAGAGGAGGA
TCCGGTTGATGGAGCTGGAGGAAGAGGAGAGGTCGGAGAGGGAGAGGAAGCTCTTCGAGGAGCGGGAGAGAGCGTGGATGGAGGTCATGGAGTTGAAGATGAAGAAGATG
GCTGAGGAGGAAGAGGAGGAGCAGCGAAGGAGCGTGTTGGAGGAAGAATCGACGGCGCCGCAGGATGAAAATGAAAATGAGTTTGGTGAGGAAGATGGTTGGGAATACAT
AGAAGGGCCTGCAGAAGTAATCTGGAAAGGAGAAGAGATAATTCTGAAGAAGAAACTAATTAAGGTTCCTAAGAAGAGTGTTGAACCTCAGAAAAGCCTAGAGGATGCTC
ATAGGCCTACGTCAAACCCTCTTCCTCCACAATCTGAAGCTTTTACAGATTATAAGGATGCAACAATTTCATCTAGACAAGTGATTGAGGATGTTGCAAGCCAAGTGCCA
AATTTTGGAACGGAACAGGCATCTCTCTCTCTTTCTCTCTTTTCCTCTGATAAATCACATTGTCCATTCCATCTAAAAACTGGAGCTTGTCGATTTGGTCAGCGTTGTAG
CAGAATTCACTTCTACCCTGACAATTCATGTACATTGCTTATCAAGAACATGTACAATGGTCCTGGCCTTGCTTGGGAGCAAGACGAGGGGCTGGAG
Protein sequenceShow/hide protein sequence
MEEPKFEGEEEEKPQVGIEAGPLEKPCLTKNLCRKEKRKALKKMKRKQLRKEVALKKLQEEEARSNDPDEQRRIRLMELEEEERSERERKLFEERERAWMEVMELKMKKM
AEEEEEEQRRSVLEEESTAPQDENENEFGEEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKSVEPQKSLEDAHRPTSNPLPPQSEAFTDYKDATISSRQVIEDVASQVP
NFGTEQASLSLSLFSSDKSHCPFHLKTGACRFGQRCSRIHFYPDNSCTLLIKNMYNGPGLAWEQDEGLE