CuGenDBv2

Gene ID	MS012560
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	zinc finger CCCH domain-containing protein 5
Genome location	scaffold63:1540840..1542650
RNA-Seq Expression	MS012560
Synteny	MS012560
Gene Ontology terms	GO:0000398 - mRNA splicing, via spliceosome (biological process) GO:0089701 - U2AF (cellular component) GO:0003723 - RNA binding (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR009145 - U2 auxiliary factor small subunit

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0060541.1 zinc finger CCCH domain-containing protein 5 [Cucumis melo var. makuwa]

9.3e-136

61.03

Show/hide

Query:  QTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYVDESGNDKHTELEHWDKLGQSRKSMSTDVDDRYYSRRSKSRSLDHGSGRSRNGEI
        +TCSHGTACNFIHCFRNPGGDYEWADSDK PPRYW+KKM SLFGY+DE  N+KH+ELE+WDK G+S KS+++DVD  Y SRRSKSRSLDHGS R  N E 
Subjt:  QTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYVDESGNDKHTELEHWDKLGQSRKSMSTDVDDRYYSRRSKSRSLDHGSGRSRNGEI

Query:  DYRWTRHSRREKVDERQKSLDKEAYEKANLKDDQQRKNRFNGADSDESADK--------------------------FERRRKRRDHSQTSRGPRNQDKN
        DYR  RHSRREKV+E+Q+SLDKE YEK   K DQQRKNR N  DSDES DK                          FE R K RD S+ SR PR QD N
Subjt:  DYRWTRHSRREKVDERQKSLDKEAYEKANLKDDQQRKNRFNGADSDESADK--------------------------FERRRKRRDHSQTSRGPRNQDKN

Query:  QRTRVQIADRDDSENTSYETDADSSSGDRDKDGHRRKRRKSNERVSETSKTIDGSPSSKSVINDPDMHGNCSDRNKDRRPISGEKPKKHWDEVPKVSDNQ
         +T V+ +DRDD++N S ETD D SSGD DKDGH+ KRRKSN R SETSKT D  P SKSVI D D HG  ++RNK+R    G K KKHWDEV K SD  
Subjt:  QRTRVQIADRDDSENTSYETDADSSSGDRDKDGHRRKRRKSNERVSETSKTIDGSPSSKSVINDPDMHGNCSDRNKDRRPISGEKPKKHWDEVPKVSDNQ

Query:  MKQKSKLKTDYESKKSSTGKICSRHLESGSRDFKTGDSHSIDSLHSDVVSDENQEVSISDRYVERFKPLD------LSEHIKKEGRWDPERSYEDFEKPS
        +++KSKLKTDYESKKSS GK  S + ES S D  T D +SIDSL++DV+ DE  E S SDRY+ERFKPLD        EHI  EGRWDP+RSY++FEK  
Subjt:  MKQKSKLKTDYESKKSSTGKICSRHLESGSRDFKTGDSHSIDSLHSDVVSDENQEVSISDRYVERFKPLD------LSEHIKKEGRWDPERSYEDFEKPS

Query:  ETTSVVHYDSGSPVHYGERSKTDVLGTVYYHDDKVNKQDHSKHRSSDLSEHRRSRRKSSRHDDDQTYSDLKSENKNSDEDYLQKN
        ET S +  +SGSPV   ERSK+DVLG      +KVNK++ S+  S++  EH+RSRRKSS HDDDQ +SDLKSE  NS++DYL K+
Subjt:  ETTSVVHYDSGSPVHYGERSKTDVLGTVYYHDDKVNKQDHSKHRSSDLSEHRRSRRKSSRHDDDQTYSDLKSENKNSDEDYLQKN

TYK00784.1 zinc finger CCCH domain-containing protein 5 [Cucumis melo var. makuwa]

9.3e-136

61.03

Show/hide

Query:  QTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYVDESGNDKHTELEHWDKLGQSRKSMSTDVDDRYYSRRSKSRSLDHGSGRSRNGEI
        +TCSHGTACNFIHCFRNPGGDYEWADSDK PPRYW+KKM SLFGY+DE  N+KH+ELE+WDK G+S KS+++DVD  Y SRRSKSRSLDHGS R  N E 
Subjt:  QTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYVDESGNDKHTELEHWDKLGQSRKSMSTDVDDRYYSRRSKSRSLDHGSGRSRNGEI

Query:  DYRWTRHSRREKVDERQKSLDKEAYEKANLKDDQQRKNRFNGADSDESADK--------------------------FERRRKRRDHSQTSRGPRNQDKN
        DYR  RHSRREKV+E+Q+SLDKE YEK   K DQQRKNR N  DSDES DK                          FE R K RD S+ SR PR QD N
Subjt:  DYRWTRHSRREKVDERQKSLDKEAYEKANLKDDQQRKNRFNGADSDESADK--------------------------FERRRKRRDHSQTSRGPRNQDKN

Query:  QRTRVQIADRDDSENTSYETDADSSSGDRDKDGHRRKRRKSNERVSETSKTIDGSPSSKSVINDPDMHGNCSDRNKDRRPISGEKPKKHWDEVPKVSDNQ
         +T V+ +DRDD++N S ETD D SSGD DKDGH+ KRRKSN R SETSKT D  P SKSVI D D HG  ++RNK+R    G K KKHWDEV K SD  
Subjt:  QRTRVQIADRDDSENTSYETDADSSSGDRDKDGHRRKRRKSNERVSETSKTIDGSPSSKSVINDPDMHGNCSDRNKDRRPISGEKPKKHWDEVPKVSDNQ

Query:  MKQKSKLKTDYESKKSSTGKICSRHLESGSRDFKTGDSHSIDSLHSDVVSDENQEVSISDRYVERFKPLD------LSEHIKKEGRWDPERSYEDFEKPS
        +++KSKLKTDYESKKSS GK  S + ES S D  T D +SIDSL++DV+ DE  E S SDRY+ERFKPLD        EHI  EGRWDP+RSY++FEK  
Subjt:  MKQKSKLKTDYESKKSSTGKICSRHLESGSRDFKTGDSHSIDSLHSDVVSDENQEVSISDRYVERFKPLD------LSEHIKKEGRWDPERSYEDFEKPS

Query:  ETTSVVHYDSGSPVHYGERSKTDVLGTVYYHDDKVNKQDHSKHRSSDLSEHRRSRRKSSRHDDDQTYSDLKSENKNSDEDYLQKN
        ET S +  +SGSPV   ERSK+DVLG      +KVNK++ S+  S++  EH+RSRRKSS HDDDQ +SDLKSE  NS++DYL K+
Subjt:  ETTSVVHYDSGSPVHYGERSKTDVLGTVYYHDDKVNKQDHSKHRSSDLSEHRRSRRKSSRHDDDQTYSDLKSENKNSDEDYLQKN

XP_008452219.1 PREDICTED: zinc finger CCCH domain-containing protein 5 [Cucumis melo]

1.2e-135

61.03

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Query:  QTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYVDESGNDKHTELEHWDKLGQSRKSMSTDVDDRYYSRRSKSRSLDHGSGRSRNGEI
        +TCSHGTACNFIHCFRNPGGDYEWADSDK PPRYW+KKM SLFGY+DE  N+KH+ELE+WDK G+S KS+++DVD  Y SRRSKSRSLDHGS R  N E 
Subjt:  QTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYVDESGNDKHTELEHWDKLGQSRKSMSTDVDDRYYSRRSKSRSLDHGSGRSRNGEI

Query:  DYRWTRHSRREKVDERQKSLDKEAYEKANLKDDQQRKNRFNGADSDESADK--------------------------FERRRKRRDHSQTSRGPRNQDKN
        DYR  RHSRREKV+E+Q+SLDKE YEK   K D+QRKNR N  DSDES DK                          FE R K RD S+ SR PR QD N
Subjt:  DYRWTRHSRREKVDERQKSLDKEAYEKANLKDDQQRKNRFNGADSDESADK--------------------------FERRRKRRDHSQTSRGPRNQDKN

Query:  QRTRVQIADRDDSENTSYETDADSSSGDRDKDGHRRKRRKSNERVSETSKTIDGSPSSKSVINDPDMHGNCSDRNKDRRPISGEKPKKHWDEVPKVSDNQ
         +T V+ +DRDD++N S ETD D SSGD DKDGH+ KRRKSN R SETSKT D  P SKSVI D D HG  ++RNK+R    G K KKHWDEV K SD+ 
Subjt:  QRTRVQIADRDDSENTSYETDADSSSGDRDKDGHRRKRRKSNERVSETSKTIDGSPSSKSVINDPDMHGNCSDRNKDRRPISGEKPKKHWDEVPKVSDNQ

Query:  MKQKSKLKTDYESKKSSTGKICSRHLESGSRDFKTGDSHSIDSLHSDVVSDENQEVSISDRYVERFKPLD------LSEHIKKEGRWDPERSYEDFEKPS
        +++KSKLKTDYESKKSS GK  S + ES S D  T D +SIDSL++DVV DE  E S SDRY+ERFKPLD       +EHI  EGRWDP+RSY++FEK  
Subjt:  MKQKSKLKTDYESKKSSTGKICSRHLESGSRDFKTGDSHSIDSLHSDVVSDENQEVSISDRYVERFKPLD------LSEHIKKEGRWDPERSYEDFEKPS

Query:  ETTSVVHYDSGSPVHYGERSKTDVLGTVYYHDDKVNKQDHSKHRSSDLSEHRRSRRKSSRHDDDQTYSDLKSENKNSDEDYLQKN
        ET S +  +SGSPV   ERSK+DVLG      +KVNK++ S+  S++  EH+RSRRKSS HDDDQ +SDLKSE  NS++DYL K+
Subjt:  ETTSVVHYDSGSPVHYGERSKTDVLGTVYYHDDKVNKQDHSKHRSSDLSEHRRSRRKSSRHDDDQTYSDLKSENKNSDEDYLQKN

XP_022136848.1 zinc finger CCCH domain-containing protein 5 [Momordica charantia]

3.8e-246

97.58

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Query:  QTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYVDESGNDKHTELEHWDKLGQSRKSMSTDVDDRYYSRRSKSRSLDHGSGRSRNGEI
        +TCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYVDESGNDKHTELEHWDKLG+SRKSMSTDVDDRYYSRRSKSRSLDHGSGR RNGEI
Subjt:  QTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYVDESGNDKHTELEHWDKLGQSRKSMSTDVDDRYYSRRSKSRSLDHGSGRSRNGEI

Query:  DYRWTRHSRREKVDERQKSLDKEAYEKANLKDDQQRKNRFNGADSDESADKFERRRKRRDHSQTSRGPRNQDKNQRTRVQIADRDDSENTSYETDADSSS
        DYRWTRHSRREKVDERQKSLDKEAYEKANLKDDQQRKNRFNGADSDESADKFERRRKRRDHSQTSRGPRNQDKNQRTRVQIADRDDSENTSYETDAD SS
Subjt:  DYRWTRHSRREKVDERQKSLDKEAYEKANLKDDQQRKNRFNGADSDESADKFERRRKRRDHSQTSRGPRNQDKNQRTRVQIADRDDSENTSYETDADSSS

Query:  GDRDKDGHRRKRRKSNERVSETSKTIDGSPSSKSVINDPDMHGNCSDRNKDRRPISGEKPKKHWDEVPKVSDNQMKQKSKLKTDYESKKSSTGKICSRHL
        GDRDKDGHRRKRRKSNERVSETSKTIDGSP SKSVINDPDMHGNCSDRNKDRRPISGEKPKKHWDEVPK SDNQMKQKSKLKTDYESKKSSTGKICSRHL
Subjt:  GDRDKDGHRRKRRKSNERVSETSKTIDGSPSSKSVINDPDMHGNCSDRNKDRRPISGEKPKKHWDEVPKVSDNQMKQKSKLKTDYESKKSSTGKICSRHL

Query:  ESGSRDFKTGDSHSIDSLHSDVVSDENQEVSISDRYVERFKPLDLSEHIKKEGRWDPERSYEDFEKPSETTSVVHYDSGSPVHYGERSKTDVLGTVYYHD
        ESGSRDFKTGDSHSIDSLHSDVVSDENQE SISDRYVERFKPLDLSEHI+KEGRWDPERSY+DFEKPSETTS VHYDSGSPVHYGERSKTDVLGTV YHD
Subjt:  ESGSRDFKTGDSHSIDSLHSDVVSDENQEVSISDRYVERFKPLDLSEHIKKEGRWDPERSYEDFEKPSETTSVVHYDSGSPVHYGERSKTDVLGTVYYHD

Query:  DKVNKQDHSKHRSSDLSEHRRSRRKSSRHDDDQTYSDLKSENKNSDEDYLQKNLR
        DKVNKQDHSKHRSSDLSEHRRSRRKSSRHDDDQTYSDLKSENKNSDEDYLQKNLR
Subjt:  DKVNKQDHSKHRSSDLSEHRRSRRKSSRHDDDQTYSDLKSENKNSDEDYLQKNLR

XP_031738076.1 zinc finger CCCH domain-containing protein 5 isoform X3 [Cucumis sativus]

1.2e-130

58.62

Show/hide

Query:  QTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYVDESGNDKHTELEHWDKLGQSRKSMSTDVDDRYYSRRSKSRSLDHGSGRSRNGEI
        +TCSHGTACNFIHCFRNPGGDYEWADSDK PPRYW+KKM SLFGY+DE  N+ H+ELEHW+K G+S KSM+ DVD  Y SRRSKSRSLDHGS RS N E 
Subjt:  QTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYVDESGNDKHTELEHWDKLGQSRKSMSTDVDDRYYSRRSKSRSLDHGSGRSRNGEI

Query:  DYRWTRHSRREKVDERQKSLDKEAYEKANL----------------------------------KDDQQRKNRFNGADSDESADKFERRRKRRDHS-QTS
        DYRW RHSRREKV E+Q+SLDKE YEK                                     K D+ RKNR N  DSDES D+FE R K RD S ++S
Subjt:  DYRWTRHSRREKVDERQKSLDKEAYEKANL----------------------------------KDDQQRKNRFNGADSDESADKFERRRKRRDHS-QTS

Query:  RGPRNQDKNQRTRVQIADRDDSENTSYETDADSSSGDRDKDGHRRKRRKSNERVSETSKTIDGSPSSKSVINDPDMHGNCSDRNKDRRPISGEKPKKHWD
        R PR Q+ N +T  +  DRDD++N + ETD D SSGD DKDGH+ KRRKSN R SETS++ D  PS+ SVI D D H   S+RNK+RR   G KPKKHWD
Subjt:  RGPRNQDKNQRTRVQIADRDDSENTSYETDADSSSGDRDKDGHRRKRRKSNERVSETSKTIDGSPSSKSVINDPDMHGNCSDRNKDRRPISGEKPKKHWD

Query:  EVPKVSDNQMKQKSKLKTDYESKKSSTGKICSRHLESGSRDFKTGDSHSIDSLHSDVVSDENQEVSISDRYVERFKPLD-----LSEHIKKEGRWDPERS
        EV K SD+ +++KS LKTDYESKK S GK  S + ES SRD  T D +SIDSLH+DV+ DE  E S SDR +ERFKPLD      +EH  KEGRWDPERS
Subjt:  EVPKVSDNQMKQKSKLKTDYESKKSSTGKICSRHLESGSRDFKTGDSHSIDSLHSDVVSDENQEVSISDRYVERFKPLD-----LSEHIKKEGRWDPERS

Query:  YEDFEKPSETTSVVHYDSGSPVHYGERSKTDVLGTVYYHDDKVNKQDHSKHRSSDLSEHRRSRRKSSRHDDDQTYSDLKSENKNSDEDYLQKN
        Y+ FEK  ET S +  +SGS V   ERSK+DVLG +     KVNK++  K  S++  EH++SRRKSSRHDDDQ +SDLKSE  NS++ YL K+
Subjt:  YEDFEKPSETTSVVHYDSGSPVHYGERSKTDVLGTVYYHDDKVNKQDHSKHRSSDLSEHRRSRRKSSRHDDDQTYSDLKSENKNSDEDYLQKN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5G3 Uncharacterized protein

5.7e-131

58.62

Show/hide

Query:  QTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYVDESGNDKHTELEHWDKLGQSRKSMSTDVDDRYYSRRSKSRSLDHGSGRSRNGEI
        +TCSHGTACNFIHCFRNPGGDYEWADSDK PPRYW+KKM SLFGY+DE  N+ H+ELEHW+K G+S KSM+ DVD  Y SRRSKSRSLDHGS RS N E 
Subjt:  QTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYVDESGNDKHTELEHWDKLGQSRKSMSTDVDDRYYSRRSKSRSLDHGSGRSRNGEI

Query:  DYRWTRHSRREKVDERQKSLDKEAYEKANL----------------------------------KDDQQRKNRFNGADSDESADKFERRRKRRDHS-QTS
        DYRW RHSRREKV E+Q+SLDKE YEK                                     K D+ RKNR N  DSDES D+FE R K RD S ++S
Subjt:  DYRWTRHSRREKVDERQKSLDKEAYEKANL----------------------------------KDDQQRKNRFNGADSDESADKFERRRKRRDHS-QTS

Query:  RGPRNQDKNQRTRVQIADRDDSENTSYETDADSSSGDRDKDGHRRKRRKSNERVSETSKTIDGSPSSKSVINDPDMHGNCSDRNKDRRPISGEKPKKHWD
        R PR Q+ N +T  +  DRDD++N + ETD D SSGD DKDGH+ KRRKSN R SETS++ D  PS+ SVI D D H   S+RNK+RR   G KPKKHWD
Subjt:  RGPRNQDKNQRTRVQIADRDDSENTSYETDADSSSGDRDKDGHRRKRRKSNERVSETSKTIDGSPSSKSVINDPDMHGNCSDRNKDRRPISGEKPKKHWD

Query:  EVPKVSDNQMKQKSKLKTDYESKKSSTGKICSRHLESGSRDFKTGDSHSIDSLHSDVVSDENQEVSISDRYVERFKPLD-----LSEHIKKEGRWDPERS
        EV K SD+ +++KS LKTDYESKK S GK  S + ES SRD  T D +SIDSLH+DV+ DE  E S SDR +ERFKPLD      +EH  KEGRWDPERS
Subjt:  EVPKVSDNQMKQKSKLKTDYESKKSSTGKICSRHLESGSRDFKTGDSHSIDSLHSDVVSDENQEVSISDRYVERFKPLD-----LSEHIKKEGRWDPERS

Query:  YEDFEKPSETTSVVHYDSGSPVHYGERSKTDVLGTVYYHDDKVNKQDHSKHRSSDLSEHRRSRRKSSRHDDDQTYSDLKSENKNSDEDYLQKN
        Y+ FEK  ET S +  +SGS V   ERSK+DVLG +     KVNK++  K  S++  EH++SRRKSSRHDDDQ +SDLKSE  NS++ YL K+
Subjt:  YEDFEKPSETTSVVHYDSGSPVHYGERSKTDVLGTVYYHDDKVNKQDHSKHRSSDLSEHRRSRRKSSRHDDDQTYSDLKSENKNSDEDYLQKN

A0A1S3BUH0 zinc finger CCCH domain-containing protein 5

5.9e-136

61.03

Show/hide

Query:  QTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYVDESGNDKHTELEHWDKLGQSRKSMSTDVDDRYYSRRSKSRSLDHGSGRSRNGEI
        +TCSHGTACNFIHCFRNPGGDYEWADSDK PPRYW+KKM SLFGY+DE  N+KH+ELE+WDK G+S KS+++DVD  Y SRRSKSRSLDHGS R  N E 
Subjt:  QTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYVDESGNDKHTELEHWDKLGQSRKSMSTDVDDRYYSRRSKSRSLDHGSGRSRNGEI

Query:  DYRWTRHSRREKVDERQKSLDKEAYEKANLKDDQQRKNRFNGADSDESADK--------------------------FERRRKRRDHSQTSRGPRNQDKN
        DYR  RHSRREKV+E+Q+SLDKE YEK   K D+QRKNR N  DSDES DK                          FE R K RD S+ SR PR QD N
Subjt:  DYRWTRHSRREKVDERQKSLDKEAYEKANLKDDQQRKNRFNGADSDESADK--------------------------FERRRKRRDHSQTSRGPRNQDKN

Query:  QRTRVQIADRDDSENTSYETDADSSSGDRDKDGHRRKRRKSNERVSETSKTIDGSPSSKSVINDPDMHGNCSDRNKDRRPISGEKPKKHWDEVPKVSDNQ
         +T V+ +DRDD++N S ETD D SSGD DKDGH+ KRRKSN R SETSKT D  P SKSVI D D HG  ++RNK+R    G K KKHWDEV K SD+ 
Subjt:  QRTRVQIADRDDSENTSYETDADSSSGDRDKDGHRRKRRKSNERVSETSKTIDGSPSSKSVINDPDMHGNCSDRNKDRRPISGEKPKKHWDEVPKVSDNQ

Query:  MKQKSKLKTDYESKKSSTGKICSRHLESGSRDFKTGDSHSIDSLHSDVVSDENQEVSISDRYVERFKPLD------LSEHIKKEGRWDPERSYEDFEKPS
        +++KSKLKTDYESKKSS GK  S + ES S D  T D +SIDSL++DVV DE  E S SDRY+ERFKPLD       +EHI  EGRWDP+RSY++FEK  
Subjt:  MKQKSKLKTDYESKKSSTGKICSRHLESGSRDFKTGDSHSIDSLHSDVVSDENQEVSISDRYVERFKPLD------LSEHIKKEGRWDPERSYEDFEKPS

Query:  ETTSVVHYDSGSPVHYGERSKTDVLGTVYYHDDKVNKQDHSKHRSSDLSEHRRSRRKSSRHDDDQTYSDLKSENKNSDEDYLQKN
        ET S +  +SGSPV   ERSK+DVLG      +KVNK++ S+  S++  EH+RSRRKSS HDDDQ +SDLKSE  NS++DYL K+
Subjt:  ETTSVVHYDSGSPVHYGERSKTDVLGTVYYHDDKVNKQDHSKHRSSDLSEHRRSRRKSSRHDDDQTYSDLKSENKNSDEDYLQKN

A0A5A7V495 Zinc finger CCCH domain-containing protein 5

4.5e-136

61.03

Show/hide

Query:  QTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYVDESGNDKHTELEHWDKLGQSRKSMSTDVDDRYYSRRSKSRSLDHGSGRSRNGEI
        +TCSHGTACNFIHCFRNPGGDYEWADSDK PPRYW+KKM SLFGY+DE  N+KH+ELE+WDK G+S KS+++DVD  Y SRRSKSRSLDHGS R  N E 
Subjt:  QTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYVDESGNDKHTELEHWDKLGQSRKSMSTDVDDRYYSRRSKSRSLDHGSGRSRNGEI

Query:  DYRWTRHSRREKVDERQKSLDKEAYEKANLKDDQQRKNRFNGADSDESADK--------------------------FERRRKRRDHSQTSRGPRNQDKN
        DYR  RHSRREKV+E+Q+SLDKE YEK   K DQQRKNR N  DSDES DK                          FE R K RD S+ SR PR QD N
Subjt:  DYRWTRHSRREKVDERQKSLDKEAYEKANLKDDQQRKNRFNGADSDESADK--------------------------FERRRKRRDHSQTSRGPRNQDKN

Query:  QRTRVQIADRDDSENTSYETDADSSSGDRDKDGHRRKRRKSNERVSETSKTIDGSPSSKSVINDPDMHGNCSDRNKDRRPISGEKPKKHWDEVPKVSDNQ
         +T V+ +DRDD++N S ETD D SSGD DKDGH+ KRRKSN R SETSKT D  P SKSVI D D HG  ++RNK+R    G K KKHWDEV K SD  
Subjt:  QRTRVQIADRDDSENTSYETDADSSSGDRDKDGHRRKRRKSNERVSETSKTIDGSPSSKSVINDPDMHGNCSDRNKDRRPISGEKPKKHWDEVPKVSDNQ

Query:  MKQKSKLKTDYESKKSSTGKICSRHLESGSRDFKTGDSHSIDSLHSDVVSDENQEVSISDRYVERFKPLD------LSEHIKKEGRWDPERSYEDFEKPS
        +++KSKLKTDYESKKSS GK  S + ES S D  T D +SIDSL++DV+ DE  E S SDRY+ERFKPLD        EHI  EGRWDP+RSY++FEK  
Subjt:  MKQKSKLKTDYESKKSSTGKICSRHLESGSRDFKTGDSHSIDSLHSDVVSDENQEVSISDRYVERFKPLD------LSEHIKKEGRWDPERSYEDFEKPS

Query:  ETTSVVHYDSGSPVHYGERSKTDVLGTVYYHDDKVNKQDHSKHRSSDLSEHRRSRRKSSRHDDDQTYSDLKSENKNSDEDYLQKN
        ET S +  +SGSPV   ERSK+DVLG      +KVNK++ S+  S++  EH+RSRRKSS HDDDQ +SDLKSE  NS++DYL K+
Subjt:  ETTSVVHYDSGSPVHYGERSKTDVLGTVYYHDDKVNKQDHSKHRSSDLSEHRRSRRKSSRHDDDQTYSDLKSENKNSDEDYLQKN

A0A5D3BNF0 Zinc finger CCCH domain-containing protein 5

4.5e-136

61.03

Show/hide

Query:  QTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYVDESGNDKHTELEHWDKLGQSRKSMSTDVDDRYYSRRSKSRSLDHGSGRSRNGEI
        +TCSHGTACNFIHCFRNPGGDYEWADSDK PPRYW+KKM SLFGY+DE  N+KH+ELE+WDK G+S KS+++DVD  Y SRRSKSRSLDHGS R  N E 
Subjt:  QTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYVDESGNDKHTELEHWDKLGQSRKSMSTDVDDRYYSRRSKSRSLDHGSGRSRNGEI

Query:  DYRWTRHSRREKVDERQKSLDKEAYEKANLKDDQQRKNRFNGADSDESADK--------------------------FERRRKRRDHSQTSRGPRNQDKN
        DYR  RHSRREKV+E+Q+SLDKE YEK   K DQQRKNR N  DSDES DK                          FE R K RD S+ SR PR QD N
Subjt:  DYRWTRHSRREKVDERQKSLDKEAYEKANLKDDQQRKNRFNGADSDESADK--------------------------FERRRKRRDHSQTSRGPRNQDKN

Query:  QRTRVQIADRDDSENTSYETDADSSSGDRDKDGHRRKRRKSNERVSETSKTIDGSPSSKSVINDPDMHGNCSDRNKDRRPISGEKPKKHWDEVPKVSDNQ
         +T V+ +DRDD++N S ETD D SSGD DKDGH+ KRRKSN R SETSKT D  P SKSVI D D HG  ++RNK+R    G K KKHWDEV K SD  
Subjt:  QRTRVQIADRDDSENTSYETDADSSSGDRDKDGHRRKRRKSNERVSETSKTIDGSPSSKSVINDPDMHGNCSDRNKDRRPISGEKPKKHWDEVPKVSDNQ

Query:  MKQKSKLKTDYESKKSSTGKICSRHLESGSRDFKTGDSHSIDSLHSDVVSDENQEVSISDRYVERFKPLD------LSEHIKKEGRWDPERSYEDFEKPS
        +++KSKLKTDYESKKSS GK  S + ES S D  T D +SIDSL++DV+ DE  E S SDRY+ERFKPLD        EHI  EGRWDP+RSY++FEK  
Subjt:  MKQKSKLKTDYESKKSSTGKICSRHLESGSRDFKTGDSHSIDSLHSDVVSDENQEVSISDRYVERFKPLD------LSEHIKKEGRWDPERSYEDFEKPS

Query:  ETTSVVHYDSGSPVHYGERSKTDVLGTVYYHDDKVNKQDHSKHRSSDLSEHRRSRRKSSRHDDDQTYSDLKSENKNSDEDYLQKN
        ET S +  +SGSPV   ERSK+DVLG      +KVNK++ S+  S++  EH+RSRRKSS HDDDQ +SDLKSE  NS++DYL K+
Subjt:  ETTSVVHYDSGSPVHYGERSKTDVLGTVYYHDDKVNKQDHSKHRSSDLSEHRRSRRKSSRHDDDQTYSDLKSENKNSDEDYLQKN

A0A6J1C8M8 zinc finger CCCH domain-containing protein 5

1.8e-246

97.58

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Query:  QTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYVDESGNDKHTELEHWDKLGQSRKSMSTDVDDRYYSRRSKSRSLDHGSGRSRNGEI
        +TCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYVDESGNDKHTELEHWDKLG+SRKSMSTDVDDRYYSRRSKSRSLDHGSGR RNGEI
Subjt:  QTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYVDESGNDKHTELEHWDKLGQSRKSMSTDVDDRYYSRRSKSRSLDHGSGRSRNGEI

Query:  DYRWTRHSRREKVDERQKSLDKEAYEKANLKDDQQRKNRFNGADSDESADKFERRRKRRDHSQTSRGPRNQDKNQRTRVQIADRDDSENTSYETDADSSS
        DYRWTRHSRREKVDERQKSLDKEAYEKANLKDDQQRKNRFNGADSDESADKFERRRKRRDHSQTSRGPRNQDKNQRTRVQIADRDDSENTSYETDAD SS
Subjt:  DYRWTRHSRREKVDERQKSLDKEAYEKANLKDDQQRKNRFNGADSDESADKFERRRKRRDHSQTSRGPRNQDKNQRTRVQIADRDDSENTSYETDADSSS

Query:  GDRDKDGHRRKRRKSNERVSETSKTIDGSPSSKSVINDPDMHGNCSDRNKDRRPISGEKPKKHWDEVPKVSDNQMKQKSKLKTDYESKKSSTGKICSRHL
        GDRDKDGHRRKRRKSNERVSETSKTIDGSP SKSVINDPDMHGNCSDRNKDRRPISGEKPKKHWDEVPK SDNQMKQKSKLKTDYESKKSSTGKICSRHL
Subjt:  GDRDKDGHRRKRRKSNERVSETSKTIDGSPSSKSVINDPDMHGNCSDRNKDRRPISGEKPKKHWDEVPKVSDNQMKQKSKLKTDYESKKSSTGKICSRHL

Query:  ESGSRDFKTGDSHSIDSLHSDVVSDENQEVSISDRYVERFKPLDLSEHIKKEGRWDPERSYEDFEKPSETTSVVHYDSGSPVHYGERSKTDVLGTVYYHD
        ESGSRDFKTGDSHSIDSLHSDVVSDENQE SISDRYVERFKPLDLSEHI+KEGRWDPERSY+DFEKPSETTS VHYDSGSPVHYGERSKTDVLGTV YHD
Subjt:  ESGSRDFKTGDSHSIDSLHSDVVSDENQEVSISDRYVERFKPLDLSEHIKKEGRWDPERSYEDFEKPSETTSVVHYDSGSPVHYGERSKTDVLGTVYYHD

Query:  DKVNKQDHSKHRSSDLSEHRRSRRKSSRHDDDQTYSDLKSENKNSDEDYLQKNLR
        DKVNKQDHSKHRSSDLSEHRRSRRKSSRHDDDQTYSDLKSENKNSDEDYLQKNLR
Subjt:  DKVNKQDHSKHRSSDLSEHRRSRRKSSRHDDDQTYSDLKSENKNSDEDYLQKNLR

SwissProt top hits

e value

%identity

Alignment

Q6YVX9 Zinc finger CCCH domain-containing protein 16

1.6e-18

27.27

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Query:  QTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYVDESGNDKHTELEHWDKLGQSRKSMSTDVDDRYYSRRSKSRSLDHGSGRSRNGEI
        +TCS G ACNFIHCFRNPGGDYEWAD D PPPRYW++KMA+LFG  D+S   K ++  H ++   S +      D RY    + SR+ D  + +  +   
Subjt:  QTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYVDESGNDKHTELEHWDKLGQSRKSMSTDVDDRYYSRRSKSRSLDHGSGRSRNGEI

Query:  DYRWTRHSRREKVDERQKSLDKEAYEKANLKDDQQRKNRF-NGADSDESADKFERRRKRR-DHSQTSRGPRNQDKNQRTRVQIADRDDSENTSYETD---
        DY  ++H R    + R+   +  A +K   ++ + + +++ +  +S+  + K+ R  K R DH    +G   + ++++ R +  +  +  ++   +D   
Subjt:  DYRWTRHSRREKVDERQKSLDKEAYEKANLKDDQQRKNRF-NGADSDESADKFERRRKRR-DHSQTSRGPRNQDKNQRTRVQIADRDDSENTSYETD---

Query:  ---ADSSSGDRDKDGHRRKRRK------SNERVSETSKTIDGSPSSKSVINDPDMHGNCSDR----NKDRRPISGEKPKKHWDEVPKVSDNQMKQKSKLK
            +S SG +    H +K R+      S  R S      D        +   D H    DR    N D   +  +   ++     + S   MK  ++  
Subjt:  ---ADSSSGDRDKDGHRRKRRK------SNERVSETSKTIDGSPSSKSVINDPDMHGNCSDR----NKDRRPISGEKPKKHWDEVPKVSDNQMKQKSKLK

Query:  TDYESKKSSTGKICSRHLESGSRDFKTGDSHSIDSLHSDVVSDENQEVSISDRYVERFKPLD--LSEHIKKEGR
        ++    +S +G   SR      R  ++G+    D+L  +V SD +     SD +  R +  D  LS H  +  R
Subjt:  TDYESKKSSTGKICSRHLESGSRDFKTGDSHSIDSLHSDVVSDENQEVSISDRYVERFKPLD--LSEHIKKEGR

Q9SY74 Zinc finger CCCH domain-containing protein 5

5.1e-20

30.79

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Query:  QTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYVDESGNDKHTELEHWDKLGQSRKSMSTDVDDRYYSRRSKSRSLDH---GSGRSRN
        +TCS G+ACNFIHCFRNPGGDYEWAD D+PPPR+W+ KM SLFGY DE    KH E E    L  S   +STD   R  SRRS+SR  DH   GS  S  
Subjt:  QTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYVDESGNDKHTELEHWDKLGQSRKSMSTDVDDRYYSRRSKSRSLDH---GSGRSRN

Query:  GEIDYRWTRHSRREKVDERQKSLDKEAYEKANLKDDQQRKNRFNGADSDESAD-KFERRRKRRDHSQTSRGPRNQDKNQRTRVQIADRDDSENTSYETDA
            +  T+ S RE         DK      N  D     +R    + +   + ++ +    RD   +   P ++   +R   + +D D ++   Y    
Subjt:  GEIDYRWTRHSRREKVDERQKSLDKEAYEKANLKDDQQRKNRFNGADSDESAD-KFERRRKRRDHSQTSRGPRNQDKNQRTRVQIADRDDSENTSYETDA

Query:  DSSSGDRDKDGHRRKRRKSNERVSETSKTIDGSPSSKSVINDPDMHGNCSDRNKDRRPISGEKPKKH-WDEVPKVSDNQMKQKSKLKTDYESKKSS--TG
              R   GH+RK R+  +           S   + + N+ D   + S R   R   S +K + H  D V  VSD   +++SK + +  S + S    
Subjt:  DSSSGDRDKDGHRRKRRKSNERVSETSKTIDGSPSSKSVINDPDMHGNCSDRNKDRRPISGEKPKKH-WDEVPKVSDNQMKQKSKLKTDYESKKSS--TG

Query:  KICSRHLESGSRDFKTGDSHSIDSLHSDVVSDENQEVSISDRYVERFKPLDLSEHIKKEGRWDPERS
           SRH +    D K     S+++      SD++++ S   +  +R+K  D      ++G+   E +
Subjt:  KICSRHLESGSRDFKTGDSHSIDSLHSDVVSDENQEVSISDRYVERFKPLDLSEHIKKEGRWDPERS

Arabidopsis top hits

e value

%identity

Alignment

AT1G10320.1 Zinc finger C-x8-C-x5-C-x3-H type family protein

3.6e-21

30.79

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Query:  QTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYVDESGNDKHTELEHWDKLGQSRKSMSTDVDDRYYSRRSKSRSLDH---GSGRSRN
        +TCS G+ACNFIHCFRNPGGDYEWAD D+PPPR+W+ KM SLFGY DE    KH E E    L  S   +STD   R  SRRS+SR  DH   GS  S  
Subjt:  QTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYVDESGNDKHTELEHWDKLGQSRKSMSTDVDDRYYSRRSKSRSLDH---GSGRSRN

Query:  GEIDYRWTRHSRREKVDERQKSLDKEAYEKANLKDDQQRKNRFNGADSDESAD-KFERRRKRRDHSQTSRGPRNQDKNQRTRVQIADRDDSENTSYETDA
            +  T+ S RE         DK      N  D     +R    + +   + ++ +    RD   +   P ++   +R   + +D D ++   Y    
Subjt:  GEIDYRWTRHSRREKVDERQKSLDKEAYEKANLKDDQQRKNRFNGADSDESAD-KFERRRKRRDHSQTSRGPRNQDKNQRTRVQIADRDDSENTSYETDA

Query:  DSSSGDRDKDGHRRKRRKSNERVSETSKTIDGSPSSKSVINDPDMHGNCSDRNKDRRPISGEKPKKH-WDEVPKVSDNQMKQKSKLKTDYESKKSS--TG
              R   GH+RK R+  +           S   + + N+ D   + S R   R   S +K + H  D V  VSD   +++SK + +  S + S    
Subjt:  DSSSGDRDKDGHRRKRRKSNERVSETSKTIDGSPSSKSVINDPDMHGNCSDRNKDRRPISGEKPKKH-WDEVPKVSDNQMKQKSKLKTDYESKKSS--TG

Query:  KICSRHLESGSRDFKTGDSHSIDSLHSDVVSDENQEVSISDRYVERFKPLDLSEHIKKEGRWDPERS
           SRH +    D K     S+++      SD++++ S   +  +R+K  D      ++G+   E +
Subjt:  KICSRHLESGSRDFKTGDSHSIDSLHSDVVSDENQEVSISDRYVERFKPLDLSEHIKKEGRWDPERS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

GCATTTTCTCAGACGTGTTCTCATGGAACAGCTTGTAATTTCATCCATTGTTTTCGAAATCCTGGTGGGGACTATGAGTGGGCTGACAGTGACAAACCACCCCCACGATA
TTGGGTGAAAAAGATGGCTTCTTTGTTTGGTTATGTAGATGAATCTGGAAATGACAAACATACTGAGCTCGAACATTGGGACAAGCTTGGACAATCCAGAAAGTCAATGT
CAACAGATGTAGACGACAGATATTATTCAAGAAGATCTAAATCTAGAAGTCTGGACCATGGTTCTGGAAGAAGTAGAAACGGTGAAATTGACTATAGATGGACCAGGCAT
TCCCGTAGAGAAAAAGTTGATGAGAGGCAGAAAAGTTTGGACAAGGAAGCATATGAGAAGGCTAACTTAAAAGATGATCAACAGAGAAAAAACAGATTTAATGGTGCAGA
TTCAGATGAATCAGCAGATAAGTTTGAAAGGAGAAGGAAACGGAGAGATCATAGTCAAACATCACGAGGGCCTAGGAATCAGGACAAAAACCAAAGAACTCGAGTTCAAA
TTGCAGATCGTGATGACAGTGAGAACACATCATATGAAACTGATGCAGACTCGTCAAGTGGCGATAGGGACAAAGATGGACATCGACGCAAAAGAAGGAAAAGCAATGAG
CGAGTTTCTGAGACTTCTAAAACCATAGATGGTTCTCCAAGCAGTAAGAGCGTAATTAACGATCCTGATATGCATGGAAATTGTTCCGACAGAAACAAGGATAGACGCCC
TATAAGTGGTGAAAAGCCCAAAAAACATTGGGATGAGGTGCCTAAAGTCTCGGATAACCAGATGAAACAGAAATCTAAGTTGAAGACTGATTATGAAAGCAAGAAATCTA
GCACAGGAAAAATTTGTAGCCGTCACTTAGAATCAGGTTCTAGGGACTTCAAGACGGGGGATAGTCACAGCATTGATTCCTTACATAGTGATGTAGTATCAGATGAGAAT
CAGGAGGTCTCTATTTCAGATCGATATGTTGAGAGGTTCAAACCACTGGATCTCAGCGAGCACATCAAGAAAGAAGGCCGATGGGATCCTGAAAGAAGTTACGAGGATTT
TGAGAAACCTAGTGAGACTACAAGTGTGGTTCACTACGATTCTGGAAGCCCTGTTCACTATGGTGAAAGAAGTAAAACGGATGTTCTTGGCACAGTGTACTACCATGATG
ACAAAGTTAATAAGCAAGATCACAGCAAACACAGAAGCAGTGATTTATCCGAACACCGGAGGTCTCGAAGAAAGTCTTCTCGGCATGATGATGATCAGACTTATAGTGAT
TTGAAATCTGAGAATAAGAATTCTGATGAGGATTACCTTCAGAAGAATCTTAGG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

AFSQTCSHGTACNFIHCFRNPGGDYEWADSDKPPPRYWVKKMASLFGYVDESGNDKHTELEHWDKLGQSRKSMSTDVDDRYYSRRSKSRSLDHGSGRSRNGEIDYRWTRH
SRREKVDERQKSLDKEAYEKANLKDDQQRKNRFNGADSDESADKFERRRKRRDHSQTSRGPRNQDKNQRTRVQIADRDDSENTSYETDADSSSGDRDKDGHRRKRRKSNE
RVSETSKTIDGSPSSKSVINDPDMHGNCSDRNKDRRPISGEKPKKHWDEVPKVSDNQMKQKSKLKTDYESKKSSTGKICSRHLESGSRDFKTGDSHSIDSLHSDVVSDEN
QEVSISDRYVERFKPLDLSEHIKKEGRWDPERSYEDFEKPSETTSVVHYDSGSPVHYGERSKTDVLGTVYYHDDKVNKQDHSKHRSSDLSEHRRSRRKSSRHDDDQTYSD
LKSENKNSDEDYLQKNLR

MS012560 (gene) of Bitter gourd (TR) v1 genome