CuGenDBv2

Gene ID	MS012592
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	cytochrome c oxidase subunit 6a, mitochondrial
Genome location	scaffold63:1884157..1885556
RNA-Seq Expression	MS012592
Synteny	MS012592
Gene Ontology terms	GO:0006123 - mitochondrial electron transport, cytochrome c to oxygen (biological process) GO:0050790 - regulation of catalytic activity (biological process) GO:1902600 - proton transmembrane transport (biological process) GO:0005751 - mitochondrial respiratory chain complex IV (cellular component) GO:0004129 - cytochrome-c oxidase activity (molecular function) GO:0030234 - enzyme regulator activity (molecular function)
InterPro domains	IPR001349 - Cytochrome c oxidase, subunit VIa IPR036418 - Cytochrome c oxidase, subunit VIa superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7015416.1 Cytochrome c oxidase subunit 6a, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.5e-43

92.55

Show/hide

Query:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDVRETAKWEKITYAGIIACTTLAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGKLPLHY
        MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDD RETAKWEKITYAGI++C+ LAFYNLSKGHPH+EEPPAYPYLHIRNKEFPWGKLP HY
Subjt:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDVRETAKWEKITYAGIIACTTLAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGKLPLHY

XP_022136571.1 cytochrome c oxidase subunit 6a, mitochondrial [Momordica charantia]

9.4e-43

98.86

Show/hide

Query:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDVRETAKWEKITYAGIIACTTLAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWG
        MAMATIRSNLLRAAFRGAS+NSAQPKRGFASSAHDDVRETAKWEKITYAGIIACTTLAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWG
Subjt:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDVRETAKWEKITYAGIIACTTLAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWG

XP_022941809.1 cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita moschata]

2.3e-41

96.59

Show/hide

Query:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDVRETAKWEKITYAGIIACTTLAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWG
        MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDD  ETAKWEKITYAGI ACTTLAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWG
Subjt:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDVRETAKWEKITYAGIIACTTLAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWG

XP_023001309.1 cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita maxima]

1.2e-40

95.45

Show/hide

Query:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDVRETAKWEKITYAGIIACTTLAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWG
        MAMATIRSNLLRAA RGASRNSAQPKRGFASSAHDD  ETAKWEKITYAGI ACTTLAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWG
Subjt:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDVRETAKWEKITYAGIIACTTLAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWG

XP_023545456.1 cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita pepo subsp. pepo]

1.2e-40

94.32

Show/hide

Query:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDVRETAKWEKITYAGIIACTTLAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWG
        M+MATIRSNLLRAAFRGASRNSAQPKRGF+SSAHDD  ETAKWEKITYAGI ACTTLAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWG
Subjt:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDVRETAKWEKITYAGIIACTTLAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWG

TrEMBL top hits

e value

%identity

Alignment

A0A6J1C3V4 cytochrome c oxidase subunit 6a, mitochondrial

4.6e-43

98.86

Show/hide

Query:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDVRETAKWEKITYAGIIACTTLAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWG
        MAMATIRSNLLRAAFRGAS+NSAQPKRGFASSAHDDVRETAKWEKITYAGIIACTTLAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWG
Subjt:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDVRETAKWEKITYAGIIACTTLAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWG

A0A6J1ERW3 cytochrome c oxidase subunit 6a, mitochondrial-like

9.5e-41

93.18

Show/hide

Query:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDVRETAKWEKITYAGIIACTTLAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWG
        MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDD RETAKWEKITYAGI++C+ LAFYNLSKGHPH+EEPPAYPYLHIRNKEFPWG
Subjt:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDVRETAKWEKITYAGIIACTTLAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWG

A0A6J1FPI8 cytochrome c oxidase subunit 6a, mitochondrial-like

1.1e-41

96.59

Show/hide

Query:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDVRETAKWEKITYAGIIACTTLAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWG
        MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDD  ETAKWEKITYAGI ACTTLAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWG
Subjt:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDVRETAKWEKITYAGIIACTTLAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWG

A0A6J1J8L1 cytochrome c oxidase subunit 6a, mitochondrial-like

1.8e-39

90.91

Show/hide

Query:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDVRETAKWEKITYAGIIACTTLAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWG
        MAMA IRSNLLRAAFRGASRN AQPKRGFASSAHDD RETAKWEKITYAGI++C+ LAFYNLSKGHPH+EEPPAYPYLHIRNKEFPWG
Subjt:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDVRETAKWEKITYAGIIACTTLAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWG

A0A6J1KMD3 cytochrome c oxidase subunit 6a, mitochondrial-like

5.6e-41

95.45

Show/hide

Query:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDVRETAKWEKITYAGIIACTTLAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWG
        MAMATIRSNLLRAA RGASRNSAQPKRGFASSAHDD  ETAKWEKITYAGI ACTTLAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWG
Subjt:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDVRETAKWEKITYAGIIACTTLAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWG

SwissProt top hits

e value

%identity

Alignment

Q9T070 Cytochrome c oxidase subunit 6a, mitochondrial

1.7e-26

66.29

Show/hide

Query:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSA-HDDVRETAKWEKITYAGIIACTTLAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWG
        MA A +RS L RA  R A + S  PKR F+SSA HDD  E AKWEKITY GI +CT LA Y LSKGH H E+PPAYP++HIRNKEFPWG
Subjt:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSA-HDDVRETAKWEKITYAGIIACTTLAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWG

Arabidopsis top hits

e value

%identity

Alignment

AT4G37830.1 cytochrome c oxidase-related

1.2e-27

66.29

Show/hide

Query:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSA-HDDVRETAKWEKITYAGIIACTTLAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWG
        MA A +RS L RA  R A + S  PKR F+SSA HDD  E AKWEKITY GI +CT LA Y LSKGH H E+PPAYP++HIRNKEFPWG
Subjt:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSA-HDDVRETAKWEKITYAGIIACTTLAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWG

AT4G37830.2 cytochrome c oxidase-related

2.0e-19

57.3

Show/hide

Query:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSA-HDDVRETAKWEKITYAGIIACTTLAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWG
        MA A +RS L RA  R A + S  PKR F+SSA HDD  E AKWEKITY GI +CT LA Y LSKGH H E+PP          EFPWG
Subjt:  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSA-HDDVRETAKWEKITYAGIIACTTLAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWG

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGATGGCGACAATCCGATCCAATCTTCTTCGCGCCGCCTTTCGCGGTGCCTCTCGAAACTCTGCTCAGCCTAAACGCGGCTTTGCTTCCTCTGCTCACGATGATGT
TCGTGAGACGGCAAAGTGGGAGAAGATTACTTACGCAGGCATTATAGCTTGCACAACTTTAGCATTCTATAATTTATCAAAGGGCCACCCCCACCATGAAGAGCCTCCTG
CATATCCCTATTTACACATACGCAATAAAGAGTTCCCATGGGGTAAGCTTCCACTTCATTAC

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDVRETAKWEKITYAGIIACTTLAFYNLSKGHPHHEEPPAYPYLHIRNKEFPWGKLPLHY

MS012592 (gene) of Bitter gourd (TR) v1 genome