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MS012595 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012595
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold63:1894998..1897049
RNA-Seq ExpressionMS012595
SyntenyMS012595
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577325.1 hypothetical protein SDJN03_24899, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2991.36Show/hide
Query:  MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLELFLQTLRAGKLNERVLRLFVATGNDEVLSLIEAFNIQQIVTPVLPT
        MTTPPSLLSLTIHSAI NLS ISDLSFLPDH+VL+LFL+TLRAGKLNERVL+LFVATG DEVLSLIEAFNIQQIVTPVLPT
Subjt:  MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLELFLQTLRAGKLNERVLRLFVATGNDEVLSLIEAFNIQQIVTPVLPT

XP_016900275.1 PREDICTED: probable UDP-arabinopyranose mutase 5 isoform X2 [Cucumis melo]1.1e-2992.59Show/hide
Query:  MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLELFLQTLRAGKLNERVLRLFVATGNDEVLSLIEAFNIQQIVTPVLPT
        MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVL LFL+TLRAGKLNERVL+LFVA+G DEVLSLI AFNIQQIVTPVLPT
Subjt:  MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLELFLQTLRAGKLNERVLRLFVATGNDEVLSLIEAFNIQQIVTPVLPT

XP_022136568.1 uncharacterized protein LOC111008243 [Momordica charantia]3.0e-3298.77Show/hide
Query:  MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLELFLQTLRAGKLNERVLRLFVATGNDEVLSLIEAFNIQQIVTPVLPT
        MT PPSLLSLTIHSAILNLSSISDLSFLPDHIVLELFLQTLRAGKLNERVLRLFVATGNDEVLSLIEAFNIQQIVTPVLPT
Subjt:  MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLELFLQTLRAGKLNERVLRLFVATGNDEVLSLIEAFNIQQIVTPVLPT

XP_022929347.1 probable UDP-arabinopyranose mutase 5 isoform X2 [Cucurbita moschata]6.3e-3089.29Show/hide
Query:  MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLELFLQTLRAGKLNERVLRLFVATGNDEVLSLIEAFNIQQIVTPVLPTSKK
        MTTPPSLLSLTIHSAI NLS ISDLSFLPDH+VL+LFL+TLRAGKLNERVL+LFVATG DEVLSLIEAFNIQQIVTPVLPT  K
Subjt:  MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLELFLQTLRAGKLNERVLRLFVATGNDEVLSLIEAFNIQQIVTPVLPTSKK

XP_022984322.1 probable UDP-arabinopyranose mutase 5 isoform X2 [Cucurbita maxima]6.3e-3089.29Show/hide
Query:  MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLELFLQTLRAGKLNERVLRLFVATGNDEVLSLIEAFNIQQIVTPVLPTSKK
        MTTPPSLLSLTIHSAI NLS ISDLSFLPDH+VL+LFL+TLRAGKLNERVL+LFVATG DEVLSLIEAFNIQQIVTPVLPT  K
Subjt:  MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLELFLQTLRAGKLNERVLRLFVATGNDEVLSLIEAFNIQQIVTPVLPTSKK

TrEMBL top hitse value%identityAlignment
A0A0A0KVY4 Uncharacterized protein2.2e-2888.89Show/hide
Query:  MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLELFLQTLRAGKLNERVLRLFVATGNDEVLSLIEAFNIQQIVTPVLPT
        MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVL LFL+TL+AGKLNERVL+LFVA+G DEVLSLI  F IQQIVTPVLPT
Subjt:  MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLELFLQTLRAGKLNERVLRLFVATGNDEVLSLIEAFNIQQIVTPVLPT

A0A1S4DX21 probable UDP-arabinopyranose mutase 5 isoform X25.2e-3092.59Show/hide
Query:  MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLELFLQTLRAGKLNERVLRLFVATGNDEVLSLIEAFNIQQIVTPVLPT
        MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVL LFL+TLRAGKLNERVL+LFVA+G DEVLSLI AFNIQQIVTPVLPT
Subjt:  MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLELFLQTLRAGKLNERVLRLFVATGNDEVLSLIEAFNIQQIVTPVLPT

A0A6J1C7X9 uncharacterized protein LOC1110082431.5e-3298.77Show/hide
Query:  MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLELFLQTLRAGKLNERVLRLFVATGNDEVLSLIEAFNIQQIVTPVLPT
        MT PPSLLSLTIHSAILNLSSISDLSFLPDHIVLELFLQTLRAGKLNERVLRLFVATGNDEVLSLIEAFNIQQIVTPVLPT
Subjt:  MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLELFLQTLRAGKLNERVLRLFVATGNDEVLSLIEAFNIQQIVTPVLPT

A0A6J1EMJ2 probable UDP-arabinopyranose mutase 5 isoform X23.1e-3089.29Show/hide
Query:  MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLELFLQTLRAGKLNERVLRLFVATGNDEVLSLIEAFNIQQIVTPVLPTSKK
        MTTPPSLLSLTIHSAI NLS ISDLSFLPDH+VL+LFL+TLRAGKLNERVL+LFVATG DEVLSLIEAFNIQQIVTPVLPT  K
Subjt:  MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLELFLQTLRAGKLNERVLRLFVATGNDEVLSLIEAFNIQQIVTPVLPTSKK

A0A6J1J1W3 probable UDP-arabinopyranose mutase 5 isoform X23.1e-3089.29Show/hide
Query:  MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLELFLQTLRAGKLNERVLRLFVATGNDEVLSLIEAFNIQQIVTPVLPTSKK
        MTTPPSLLSLTIHSAI NLS ISDLSFLPDH+VL+LFL+TLRAGKLNERVL+LFVATG DEVLSLIEAFNIQQIVTPVLPT  K
Subjt:  MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLELFLQTLRAGKLNERVLRLFVATGNDEVLSLIEAFNIQQIVTPVLPTSKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G30390.1 unknown protein5.5e-2469.23Show/hide
Query:  PPSLLSLTIHSAILNLSSISDLSFLPDHIVLELFLQTLRAGKLNERVLRLFVATGNDEVLSLIEAFNIQQIVTPVLPT
        PPSLLSLT+++A+LN+S I+DLS LPDHIVL+LF +TL AGKLNERVLRLF+A+GN+EVLS+I+A  I+  V+P+LPT
Subjt:  PPSLLSLTIHSAILNLSSISDLSFLPDHIVLELFLQTLRAGKLNERVLRLFVATGNDEVLSLIEAFNIQQIVTPVLPT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAACCCCTCCATCTCTCCTGTCTTTAACTATTCATTCCGCCATCCTTAACCTTTCCAGCATCTCCGATCTCTCTTTTCTCCCTGATCATATCGTCCTTGAACTCTT
CCTGCAAACATTACGGGCTGGAAAACTAAACGAGAGAGTTTTGAGGTTGTTCGTGGCAACCGGAAATGATGAAGTCCTTTCACTCATCGAGGCATTCAATATCCAGCAAA
TTGTCACCCCTGTTCTTCCTACCAGTAAGAAAACT
mRNA sequenceShow/hide mRNA sequence
ATGACAACCCCTCCATCTCTCCTGTCTTTAACTATTCATTCCGCCATCCTTAACCTTTCCAGCATCTCCGATCTCTCTTTTCTCCCTGATCATATCGTCCTTGAACTCTT
CCTGCAAACATTACGGGCTGGAAAACTAAACGAGAGAGTTTTGAGGTTGTTCGTGGCAACCGGAAATGATGAAGTCCTTTCACTCATCGAGGCATTCAATATCCAGCAAA
TTGTCACCCCTGTTCTTCCTACCAGTAAGAAAACT
Protein sequenceShow/hide protein sequence
MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLELFLQTLRAGKLNERVLRLFVATGNDEVLSLIEAFNIQQIVTPVLPTSKKT