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MS012606 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012606
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold63:1988661..1989206
RNA-Seq ExpressionMS012606
SyntenyMS012606
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600670.1 hypothetical protein SDJN03_05903, partial [Cucurbita argyrosperma subsp. sororia]3.5e-5468.33Show/hide
Query:  NPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFT----GMARVKDRERDEAESGGVEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFE
        NP+A+DS DML   LEF +KPGVDLIRNCDLPPPQK+FT    G    + R R+E E+GG+EEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFE
Subjt:  NPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFT----GMARVKDRERDEAESGGVEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFE

Query:  DEARLIFFYRQSVKLLQLRLSNLQKMHDEEESRRNGDSDAPAAGGGGGGGEAMKWVWALAICFTVVGVGFLYGYTC-NVD
        DEARLIF YRQS+KL++LR+S L+K  +EEE   NG+         G G   +KWVWALAIC +VVGVG L GYTC NVD
Subjt:  DEARLIFFYRQSVKLLQLRLSNLQKMHDEEESRRNGDSDAPAAGGGGGGGEAMKWVWALAICFTVVGVGFLYGYTC-NVD

KAG7031309.1 hypothetical protein SDJN02_05349, partial [Cucurbita argyrosperma subsp. argyrosperma]3.3e-5266.67Show/hide
Query:  NPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFT----GMARVKDRERDEAESGGVEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFE
        NP+A+DS DML   LEF +KPGVDLIRNCDLPPPQK+FT    G    + R R+E E+GG+EEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFE
Subjt:  NPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFT----GMARVKDRERDEAESGGVEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFE

Query:  DEARLIFFYRQSVKLLQLRLSNLQKMHDEEESRRNGDSDAPAAGGGGGGGEAMKWVWALAICFTVVGVGFLYGYTCN
        DEARLIF YRQS+KL++LR+S L+K  +EEE               G G   +KWVWALAIC +VVGVG L GYTC+
Subjt:  DEARLIFFYRQSVKLLQLRLSNLQKMHDEEESRRNGDSDAPAAGGGGGGGEAMKWVWALAICFTVVGVGFLYGYTCN

XP_022136673.1 uncharacterized protein LOC111008325 [Momordica charantia]2.0e-8999.43Show/hide
Query:  MNPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFTGMARVKDRERDEAESGGVEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEA
        MNPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFTGMARVKDRERDEAESGGVEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEA
Subjt:  MNPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFTGMARVKDRERDEAESGGVEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEA

Query:  RLIFFYRQSVKLLQLRLSNLQKMHDEEESRRNGDSDAPAAGGGGGGGEAMKWVWALAICFTVVGVGFLYGYTCNVD
        RLIFFYRQSVKLLQLRLSNLQKMHDEEESRRNGDSDAPAA GGGGGGEAMKWVWALAICFTVVGVGFLYGYTCNVD
Subjt:  RLIFFYRQSVKLLQLRLSNLQKMHDEEESRRNGDSDAPAAGGGGGGGEAMKWVWALAICFTVVGVGFLYGYTCNVD

XP_022943244.1 uncharacterized protein LOC111448032 [Cucurbita moschata]1.6e-5166.1Show/hide
Query:  NPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFT----GMARVKDRERDEAESGGVEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFE
        NP+A+DS DML   LEF +KP VDLIRNCDLPPPQK+FT    G    + R R+E E+GG+EEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFE
Subjt:  NPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFT----GMARVKDRERDEAESGGVEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFE

Query:  DEARLIFFYRQSVKLLQLRLSNLQKMHDEEESRRNGDSDAPAAGGGGGGGEAMKWVWALAICFTVVGVGFLYGYTCN
        DEARLIF YRQS+KL++LR+S L+K  +EEE               G G   +KWVWALAIC +VVGVG L GYTC+
Subjt:  DEARLIFFYRQSVKLLQLRLSNLQKMHDEEESRRNGDSDAPAAGGGGGGGEAMKWVWALAICFTVVGVGFLYGYTCN

XP_022970087.1 uncharacterized protein LOC111469054 [Cucurbita maxima]5.1e-5368.33Show/hide
Query:  NPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFT----GMARVKDRERDEAESGGVEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFE
        NP+A+DS DML   LEF +KPGVDLIRNCDLPPPQK+FT    G    + R R+E E+GG+EEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFE
Subjt:  NPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFT----GMARVKDRERDEAESGGVEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFE

Query:  DEARLIFFYRQSVKLLQLRLSNLQKMHDEEESRRNGDSDAPAAGGGGGGGEAMKWVWALAICFTVVGVGFLYGYTC-NVD
        DEARLIF YRQS+KL++LR+S L+K  +EEE            G G GGG  +KWVWALAIC +VVGVG L GY C NVD
Subjt:  DEARLIFFYRQSVKLLQLRLSNLQKMHDEEESRRNGDSDAPAAGGGGGGGEAMKWVWALAICFTVVGVGFLYGYTC-NVD

TrEMBL top hitse value%identityAlignment
A0A1S3C2P7 uncharacterized protein LOC1034957941.4e-4360.69Show/hide
Query:  NPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFTGMARVKDRERDEAESGGVEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEAR
        N +++DS DM+        + GV+LIRNCDLPPPQK+F                 G+EEK+ELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEAR
Subjt:  NPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFTGMARVKDRERDEAESGGVEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEAR

Query:  LIFFYRQSVKLLQLRLSNLQKMHDEEESRRNGDSDAPAAGGGGGGGEAMKWVWALAICFTVVGVGFLYGYTCN
        L+F YRQS+KLL+LR+  LQK   EE      + +    GG GG    MKWVWALAIC +VVGVGFL GYTCN
Subjt:  LIFFYRQSVKLLQLRLSNLQKMHDEEESRRNGDSDAPAAGGGGGGGEAMKWVWALAICFTVVGVGFLYGYTCN

A0A5D3BEN7 Uncharacterized protein1.4e-4360.69Show/hide
Query:  NPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFTGMARVKDRERDEAESGGVEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEAR
        N +++DS DM+        + GV+LIRNCDLPPPQK+F                 G+EEK+ELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEAR
Subjt:  NPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFTGMARVKDRERDEAESGGVEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEAR

Query:  LIFFYRQSVKLLQLRLSNLQKMHDEEESRRNGDSDAPAAGGGGGGGEAMKWVWALAICFTVVGVGFLYGYTCN
        L+F YRQS+KLL+LR+  LQK   EE      + +    GG GG    MKWVWALAIC +VVGVGFL GYTCN
Subjt:  LIFFYRQSVKLLQLRLSNLQKMHDEEESRRNGDSDAPAAGGGGGGGEAMKWVWALAICFTVVGVGFLYGYTCN

A0A6J1C873 uncharacterized protein LOC1110083259.6e-9099.43Show/hide
Query:  MNPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFTGMARVKDRERDEAESGGVEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEA
        MNPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFTGMARVKDRERDEAESGGVEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEA
Subjt:  MNPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFTGMARVKDRERDEAESGGVEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEA

Query:  RLIFFYRQSVKLLQLRLSNLQKMHDEEESRRNGDSDAPAAGGGGGGGEAMKWVWALAICFTVVGVGFLYGYTCNVD
        RLIFFYRQSVKLLQLRLSNLQKMHDEEESRRNGDSDAPAA GGGGGGEAMKWVWALAICFTVVGVGFLYGYTCNVD
Subjt:  RLIFFYRQSVKLLQLRLSNLQKMHDEEESRRNGDSDAPAAGGGGGGGEAMKWVWALAICFTVVGVGFLYGYTCNVD

A0A6J1FTQ9 uncharacterized protein LOC1114480328.0e-5266.1Show/hide
Query:  NPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFT----GMARVKDRERDEAESGGVEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFE
        NP+A+DS DML   LEF +KP VDLIRNCDLPPPQK+FT    G    + R R+E E+GG+EEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFE
Subjt:  NPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFT----GMARVKDRERDEAESGGVEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFE

Query:  DEARLIFFYRQSVKLLQLRLSNLQKMHDEEESRRNGDSDAPAAGGGGGGGEAMKWVWALAICFTVVGVGFLYGYTCN
        DEARLIF YRQS+KL++LR+S L+K  +EEE               G G   +KWVWALAIC +VVGVG L GYTC+
Subjt:  DEARLIFFYRQSVKLLQLRLSNLQKMHDEEESRRNGDSDAPAAGGGGGGGEAMKWVWALAICFTVVGVGFLYGYTCN

A0A6J1HY55 uncharacterized protein LOC1114690542.5e-5368.33Show/hide
Query:  NPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFT----GMARVKDRERDEAESGGVEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFE
        NP+A+DS DML   LEF +KPGVDLIRNCDLPPPQK+FT    G    + R R+E E+GG+EEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFE
Subjt:  NPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFT----GMARVKDRERDEAESGGVEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFE

Query:  DEARLIFFYRQSVKLLQLRLSNLQKMHDEEESRRNGDSDAPAAGGGGGGGEAMKWVWALAICFTVVGVGFLYGYTC-NVD
        DEARLIF YRQS+KL++LR+S L+K  +EEE            G G GGG  +KWVWALAIC +VVGVG L GY C NVD
Subjt:  DEARLIFFYRQSVKLLQLRLSNLQKMHDEEESRRNGDSDAPAAGGGGGGGEAMKWVWALAICFTVVGVGFLYGYTC-NVD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G01240.1 unknown protein9.7e-1032.07Show/hide
Query:  IRNCDLPPPQKIFTGMARV-------------------KDR-ERDEAESGGVEEKL---------------ELLKALRLSQTRAREAERKAAKLMEERDC
        I+NCDLPPPQK+   +                      KDR ER  + +G  E K                +LL+ALR SQTRAREAER A +   E+D 
Subjt:  IRNCDLPPPQKIFTGMARV-------------------KDR-ERDEAESGGVEEKL---------------ELLKALRLSQTRAREAERKAAKLMEERDC

Query:  ISRAFEDEARLIFFYRQSVKLLQLRLSNLQ-KMHDEEESRRNGDS--DAPAAGGGGGGGEAMKWVWALAICFTVVGVGFLYGYT
        +      +A  +  Y+Q +KLL++    LQ K  +E+E +  G +       G     GE  +++ A A+ F+++G G L G+T
Subjt:  ISRAFEDEARLIFFYRQSVKLLQLRLSNLQ-KMHDEEESRRNGDS--DAPAAGGGGGGGEAMKWVWALAICFTVVGVGFLYGYT

AT1G01240.2 unknown protein9.7e-1032.07Show/hide
Query:  IRNCDLPPPQKIFTGMARV-------------------KDR-ERDEAESGGVEEKL---------------ELLKALRLSQTRAREAERKAAKLMEERDC
        I+NCDLPPPQK+   +                      KDR ER  + +G  E K                +LL+ALR SQTRAREAER A +   E+D 
Subjt:  IRNCDLPPPQKIFTGMARV-------------------KDR-ERDEAESGGVEEKL---------------ELLKALRLSQTRAREAERKAAKLMEERDC

Query:  ISRAFEDEARLIFFYRQSVKLLQLRLSNLQ-KMHDEEESRRNGDS--DAPAAGGGGGGGEAMKWVWALAICFTVVGVGFLYGYT
        +      +A  +  Y+Q +KLL++    LQ K  +E+E +  G +       G     GE  +++ A A+ F+++G G L G+T
Subjt:  ISRAFEDEARLIFFYRQSVKLLQLRLSNLQ-KMHDEEESRRNGDS--DAPAAGGGGGGGEAMKWVWALAICFTVVGVGFLYGYT

AT1G01240.3 unknown protein9.7e-1032.07Show/hide
Query:  IRNCDLPPPQKIFTGMARV-------------------KDR-ERDEAESGGVEEKL---------------ELLKALRLSQTRAREAERKAAKLMEERDC
        I+NCDLPPPQK+   +                      KDR ER  + +G  E K                +LL+ALR SQTRAREAER A +   E+D 
Subjt:  IRNCDLPPPQKIFTGMARV-------------------KDR-ERDEAESGGVEEKL---------------ELLKALRLSQTRAREAERKAAKLMEERDC

Query:  ISRAFEDEARLIFFYRQSVKLLQLRLSNLQ-KMHDEEESRRNGDS--DAPAAGGGGGGGEAMKWVWALAICFTVVGVGFLYGYT
        +      +A  +  Y+Q +KLL++    LQ K  +E+E +  G +       G     GE  +++ A A+ F+++G G L G+T
Subjt:  ISRAFEDEARLIFFYRQSVKLLQLRLSNLQ-KMHDEEESRRNGDS--DAPAAGGGGGGGEAMKWVWALAICFTVVGVGFLYGYT

AT2G46550.1 unknown protein1.3e-0931.75Show/hide
Query:  VDLIRNCDLPPPQKI---FTGMARVKD-----------------------RERDEAESGGVEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFE
        +D + NCDLP PQK+   + G  R  D                       + R EA S     K ELL+ALR SQTRAREAE  A +   E++ + +   
Subjt:  VDLIRNCDLPPPQKI---FTGMARVKD-----------------------RERDEAESGGVEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFE

Query:  DEARLIFFYRQSVKLLQLRLSNLQKMHDEEESRRNGD--------SDAPAAGGG------GGGGEAMKWVWALAICFTVVGVGFLYGYT
         +A  +F Y+Q ++LLQL    LQ  + E +++ N D        S+  A   G       G     K+   LA+  ++VG G L G+T
Subjt:  DEARLIFFYRQSVKLLQLRLSNLQKMHDEEESRRNGD--------SDAPAAGGG------GGGGEAMKWVWALAICFTVVGVGFLYGYT

AT2G46550.2 unknown protein1.3e-0931.75Show/hide
Query:  VDLIRNCDLPPPQKI---FTGMARVKD-----------------------RERDEAESGGVEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFE
        +D + NCDLP PQK+   + G  R  D                       + R EA S     K ELL+ALR SQTRAREAE  A +   E++ + +   
Subjt:  VDLIRNCDLPPPQKI---FTGMARVKD-----------------------RERDEAESGGVEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFE

Query:  DEARLIFFYRQSVKLLQLRLSNLQKMHDEEESRRNGD--------SDAPAAGGG------GGGGEAMKWVWALAICFTVVGVGFLYGYT
         +A  +F Y+Q ++LLQL    LQ  + E +++ N D        S+  A   G       G     K+   LA+  ++VG G L G+T
Subjt:  DEARLIFFYRQSVKLLQLRLSNLQKMHDEEESRRNGD--------SDAPAAGGG------GGGGEAMKWVWALAICFTVVGVGFLYGYT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCCAAACTACCGCCGATCATGAACCCCAAAGCCATGGATTCGGCCGACATGCTCCTCATGGGGCTCGAATTTTCCCACAAACCCGGCGTTGACCTAATTCGGAATTGCGA
TCTCCCGCCGCCGCAGAAGATATTCACGGGCATGGCCAGAGTTAAAGATCGGGAGCGGGATGAGGCGGAATCCGGCGGCGTGGAGGAGAAATTGGAGCTACTGAAGGCTC
TGAGGCTGTCGCAGACGCGGGCGAGAGAAGCGGAGAGAAAGGCCGCGAAATTGATGGAGGAGAGGGATTGTATCAGTAGGGCTTTCGAAGACGAGGCCAGATTGATTTTC
TTTTACCGCCAATCGGTGAAGTTGCTGCAGCTTCGGCTCTCCAATTTGCAGAAAATGCACGACGAGGAAGAGAGCAGGAGAAATGGGGATTCCGATGCGCCGGCGGCCGG
CGGCGGAGGCGGGGGCGGCGAAGCTATGAAATGGGTTTGGGCTTTGGCAATTTGCTTCACTGTTGTGGGAGTGGGCTTTCTCTACGGCTACACCTGTAATGTCGAT
mRNA sequenceShow/hide mRNA sequence
CCCAAACTACCGCCGATCATGAACCCCAAAGCCATGGATTCGGCCGACATGCTCCTCATGGGGCTCGAATTTTCCCACAAACCCGGCGTTGACCTAATTCGGAATTGCGA
TCTCCCGCCGCCGCAGAAGATATTCACGGGCATGGCCAGAGTTAAAGATCGGGAGCGGGATGAGGCGGAATCCGGCGGCGTGGAGGAGAAATTGGAGCTACTGAAGGCTC
TGAGGCTGTCGCAGACGCGGGCGAGAGAAGCGGAGAGAAAGGCCGCGAAATTGATGGAGGAGAGGGATTGTATCAGTAGGGCTTTCGAAGACGAGGCCAGATTGATTTTC
TTTTACCGCCAATCGGTGAAGTTGCTGCAGCTTCGGCTCTCCAATTTGCAGAAAATGCACGACGAGGAAGAGAGCAGGAGAAATGGGGATTCCGATGCGCCGGCGGCCGG
CGGCGGAGGCGGGGGCGGCGAAGCTATGAAATGGGTTTGGGCTTTGGCAATTTGCTTCACTGTTGTGGGAGTGGGCTTTCTCTACGGCTACACCTGTAATGTCGAT
Protein sequenceShow/hide protein sequence
PKLPPIMNPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFTGMARVKDRERDEAESGGVEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIF
FYRQSVKLLQLRLSNLQKMHDEEESRRNGDSDAPAAGGGGGGGEAMKWVWALAICFTVVGVGFLYGYTCNVD