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MS012629 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012629
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRibosomal protein
Genome locationscaffold63:2179556..2180074
RNA-Seq ExpressionMS012629
SyntenyMS012629
Gene Ontology termsGO:0010584 - pollen exine formation (biological process)
GO:0015789 - UDP-N-acetylgalactosamine transmembrane transport (biological process)
GO:0032543 - mitochondrial translation (biological process)
GO:1902183 - regulation of shoot apical meristem development (biological process)
GO:1903070 - negative regulation of ER-associated ubiquitin-dependent protein catabolic process (biological process)
GO:1903857 - negative regulation of cytokinin dehydrogenase activity (biological process)
GO:1990569 - UDP-N-acetylglucosamine transmembrane transport (biological process)
GO:0000139 - Golgi membrane (cellular component)
GO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005463 - UDP-N-acetylgalactosamine transmembrane transporter activity (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR013025 - Ribosomal protein L25/L23
IPR012678 - Ribosomal protein L23/L15e core domain superfamily
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022136442.1 uncharacterized protein LOC111008152 [Momordica charantia]6.1e-88100Show/hide
Query:  MGSRLGRRVVHFANLPIKLLMPTSFSNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
        MGSRLGRRVVHFANLPIKLLMPTSFSNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
Subjt:  MGSRLGRRVVHFANLPIKLLMPTSFSNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP

Query:  IRIIEEEKRNMNKQSKSSIVEEGEAKRHWLHGEEVEKFKAYKGSADRGRRRTDRAEAAEPSTKFPWSSMRSAR
        IRIIEEEKRNMNKQSKSSIVEEGEAKRHWLHGEEVEKFKAYKGSADRGRRRTDRAEAAEPSTKFPWSSMRSAR
Subjt:  IRIIEEEKRNMNKQSKSSIVEEGEAKRHWLHGEEVEKFKAYKGSADRGRRRTDRAEAAEPSTKFPWSSMRSAR

XP_022929525.1 uncharacterized protein LOC111436066 [Cucurbita moschata]9.7e-7889.6Show/hide
Query:  MGSRLGRRVVHFANLPIKLLMPTSFSNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
        MGSRLGRRV+HFANLPIKLLMPTSF+NITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNM+GKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
Subjt:  MGSRLGRRVVHFANLPIKLLMPTSFSNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP

Query:  IRIIEEEKRNMNKQSKSSIVEEGEAKRHWLHGEEVEKFKAYKGSADRGRRRTDRAEAAEPSTKFPWSSMRSAR
        IRIIEE+KRNMNKQSKSSIVEEGEAKRHWLH +E   FKAYKG ++R RRRT  AE  EPSTKFPWSSMRS R
Subjt:  IRIIEEEKRNMNKQSKSSIVEEGEAKRHWLHGEEVEKFKAYKGSADRGRRRTDRAEAAEPSTKFPWSSMRSAR

XP_022985025.1 uncharacterized protein LOC111483116 [Cucurbita maxima]1.3e-7790.17Show/hide
Query:  MGSRLGRRVVHFANLPIKLLMPTSFSNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
        MGSRLGRRVVHFANLPIKLLMPTSF+NITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNM+GKKKKRGGLLIAKPDYKKAYVTLRN LSISPDVYP
Subjt:  MGSRLGRRVVHFANLPIKLLMPTSFSNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP

Query:  IRIIEEEKRNMNKQSKSSIVEEGEAKRHWLHGEEVEKFKAYKGSADRGRRRTDRAEAAEPSTKFPWSSMRSAR
        IRIIEE+KRNMNKQSKSSIVEEGEAKRHWLH +E   FKAYKG +DR RRRT  AE  EPSTKFPWSSMRS R
Subjt:  IRIIEEEKRNMNKQSKSSIVEEGEAKRHWLHGEEVEKFKAYKGSADRGRRRTDRAEAAEPSTKFPWSSMRSAR

XP_023531609.1 uncharacterized protein LOC111793793 [Cucurbita pepo subsp. pepo]2.6e-7890.75Show/hide
Query:  MGSRLGRRVVHFANLPIKLLMPTSFSNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
        MGSRLGRRVVHFANLPIKLLMPTSF+NITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNM+GKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
Subjt:  MGSRLGRRVVHFANLPIKLLMPTSFSNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP

Query:  IRIIEEEKRNMNKQSKSSIVEEGEAKRHWLHGEEVEKFKAYKGSADRGRRRTDRAEAAEPSTKFPWSSMRSAR
        IRIIEE+KRNMNKQSKSSIVEEGEAKRHWLH +E    K YKG ADRGRRR   AEA EPSTKFPWSSMRS R
Subjt:  IRIIEEEKRNMNKQSKSSIVEEGEAKRHWLHGEEVEKFKAYKGSADRGRRRTDRAEAAEPSTKFPWSSMRSAR

XP_023552749.1 uncharacterized protein LOC111810290 [Cucurbita pepo subsp. pepo]1.3e-7789.02Show/hide
Query:  MGSRLGRRVVHFANLPIKLLMPTSFSNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
        MGSRLGRRV+HFANLPIKLLMPTSF+NITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNM+GKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
Subjt:  MGSRLGRRVVHFANLPIKLLMPTSFSNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP

Query:  IRIIEEEKRNMNKQSKSSIVEEGEAKRHWLHGEEVEKFKAYKGSADRGRRRTDRAEAAEPSTKFPWSSMRSAR
        IRIIEE+KRNMNKQSK SIVEEGEAKRHWLH +E  +FK+YKG A+RGRR+T  AE  EPSTKFPWSSMRS R
Subjt:  IRIIEEEKRNMNKQSKSSIVEEGEAKRHWLHGEEVEKFKAYKGSADRGRRRTDRAEAAEPSTKFPWSSMRSAR

TrEMBL top hitse value%identityAlignment
A0A0A0L0J2 Uncharacterized protein9.8e-7687.93Show/hide
Query:  MGSRLGRRVVHFANLPIKLLMPTSFSNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
        MGSRLGRRVVHFANLPIKLLMPTSF+NITEIALKTIPSASKIEIKRVLESLYGFEVDKV+TLNMEGKKKKRGG+LIAKPDYKKAYVTLRNPLSISPD+YP
Subjt:  MGSRLGRRVVHFANLPIKLLMPTSFSNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP

Query:  IRIIEEEKRNMNKQSKSSIVEEGEAKRHWLHGEEVEKFKAYKGSADRGRRRT-DRAEAAEPSTKFPWSSMRSAR
        IRIIEE+KRNMNKQSKSSIVEEGEAK+HWLH +E    K YKG ADRGRRR+   AE  EPSTKFPWSSMRS R
Subjt:  IRIIEEEKRNMNKQSKSSIVEEGEAKRHWLHGEEVEKFKAYKGSADRGRRRT-DRAEAAEPSTKFPWSSMRSAR

A0A6J1C5I4 uncharacterized protein LOC1110081522.9e-88100Show/hide
Query:  MGSRLGRRVVHFANLPIKLLMPTSFSNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
        MGSRLGRRVVHFANLPIKLLMPTSFSNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
Subjt:  MGSRLGRRVVHFANLPIKLLMPTSFSNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP

Query:  IRIIEEEKRNMNKQSKSSIVEEGEAKRHWLHGEEVEKFKAYKGSADRGRRRTDRAEAAEPSTKFPWSSMRSAR
        IRIIEEEKRNMNKQSKSSIVEEGEAKRHWLHGEEVEKFKAYKGSADRGRRRTDRAEAAEPSTKFPWSSMRSAR
Subjt:  IRIIEEEKRNMNKQSKSSIVEEGEAKRHWLHGEEVEKFKAYKGSADRGRRRTDRAEAAEPSTKFPWSSMRSAR

A0A6J1EUM4 uncharacterized protein LOC1114360664.7e-7889.6Show/hide
Query:  MGSRLGRRVVHFANLPIKLLMPTSFSNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
        MGSRLGRRV+HFANLPIKLLMPTSF+NITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNM+GKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
Subjt:  MGSRLGRRVVHFANLPIKLLMPTSFSNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP

Query:  IRIIEEEKRNMNKQSKSSIVEEGEAKRHWLHGEEVEKFKAYKGSADRGRRRTDRAEAAEPSTKFPWSSMRSAR
        IRIIEE+KRNMNKQSKSSIVEEGEAKRHWLH +E   FKAYKG ++R RRRT  AE  EPSTKFPWSSMRS R
Subjt:  IRIIEEEKRNMNKQSKSSIVEEGEAKRHWLHGEEVEKFKAYKGSADRGRRRTDRAEAAEPSTKFPWSSMRSAR

A0A6J1FSK6 uncharacterized protein LOC1114480491.4e-7790.17Show/hide
Query:  MGSRLGRRVVHFANLPIKLLMPTSFSNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
        M SRLGRRVVHFANLPIKLLMPTSF+NITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNM+GKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
Subjt:  MGSRLGRRVVHFANLPIKLLMPTSFSNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP

Query:  IRIIEEEKRNMNKQSKSSIVEEGEAKRHWLHGEEVEKFKAYKGSADRGRRRTDRAEAAEPSTKFPWSSMRSAR
        IRIIEE+KRNMNKQSKSSIVEEGEAKRHWLH +E    K YKG ADRGRRR   AEA EPSTKFPWSSMRS R
Subjt:  IRIIEEEKRNMNKQSKSSIVEEGEAKRHWLHGEEVEKFKAYKGSADRGRRRTDRAEAAEPSTKFPWSSMRSAR

A0A6J1JA70 uncharacterized protein LOC1114831166.1e-7890.17Show/hide
Query:  MGSRLGRRVVHFANLPIKLLMPTSFSNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
        MGSRLGRRVVHFANLPIKLLMPTSF+NITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNM+GKKKKRGGLLIAKPDYKKAYVTLRN LSISPDVYP
Subjt:  MGSRLGRRVVHFANLPIKLLMPTSFSNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP

Query:  IRIIEEEKRNMNKQSKSSIVEEGEAKRHWLHGEEVEKFKAYKGSADRGRRRTDRAEAAEPSTKFPWSSMRSAR
        IRIIEE+KRNMNKQSKSSIVEEGEAKRHWLH +E   FKAYKG +DR RRRT  AE  EPSTKFPWSSMRS R
Subjt:  IRIIEEEKRNMNKQSKSSIVEEGEAKRHWLHGEEVEKFKAYKGSADRGRRRTDRAEAAEPSTKFPWSSMRSAR

SwissProt top hitse value%identityAlignment
A0KF23 50S ribosomal protein L231.6e-0645.76Show/hide
Query:  IALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLR
        I  K    A+K E+K  +  L+  EV+ VRTLNM+GK K+ G  +  + D+KKAYVTL+
Subjt:  IALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLR

A4ST04 50S ribosomal protein L232.1e-0645.76Show/hide
Query:  IALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLR
        I  K    A+K E+K  +  L+  EV+ VRTLNM+GK K+ G  +  + D+KKAYVTL+
Subjt:  IALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLR

P55839 50S ribosomal protein L232.7e-0642.19Show/hide
Query:  IALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSI
        I  K    A+K+EI   +E L+  +VD VRT+ ++GK K+RG  +  + D+KKAYVTL+   S+
Subjt:  IALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSI

Q0ABH3 50S ribosomal protein L232.1e-0645.76Show/hide
Query:  EIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTL
        E+  K    A K EI++ +E L+  +V  VRT+ M+GK+K+ G L   +PD+KKAYVTL
Subjt:  EIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTL

Q605B4 50S ribosomal protein L239.3e-0741.67Show/hide
Query:  EIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLR
        +   +  P+ASK++IK  +E ++G +VD VR LN++GK K+ G  +  + D+KKAYV L+
Subjt:  EIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLR

Arabidopsis top hitse value%identityAlignment
AT4G39880.1 Ribosomal protein L23/L15e family protein7.5e-5264.57Show/hide
Query:  MGSRLGRRVVHFANLPIKLLMPTSFSNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP
        MGSRLG RVVHFANLPIKLLMP   +NI E ALKTIPSASKIEIKRVLESLYGF+V+KV TLNM+GKKKKRGGLLIAK DYKKAYVTLR+PLSIS D++P
Subjt:  MGSRLGRRVVHFANLPIKLLMPTSFSNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYP

Query:  IRIIEEEKRNMNKQSKSSIVEEGEAKRHWLHGEEVEKFKAY-KGSADRGRRR----TDRAEAAEPSTKFPWSSMR
        ++ IEE++++  K S S + EE + K HWL  +E  +   Y KG   RG  R    T    AA  + KFPWS+MR
Subjt:  IRIIEEEKRNMNKQSKSSIVEEGEAKRHWLHGEEVEKFKAY-KGSADRGRRR----TDRAEAAEPSTKFPWSSMR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGCAGACTCGGAAGAAGAGTTGTTCACTTCGCAAATCTTCCAATCAAGCTTCTTATGCCGACCTCCTTCTCCAACATCACAGAAATTGCCCTCAAAACTATTCC
CTCTGCTTCCAAAATCGAAATCAAGCGCGTCCTTGAGAGCCTCTACGGCTTTGAGGTCGATAAAGTTCGAACTCTCAATATGGAGGGGAAGAAGAAGAAGCGAGGAGGGC
TTTTGATCGCAAAGCCCGATTACAAGAAAGCCTATGTTACTCTCAGGAATCCCTTGTCAATCTCTCCGGACGTCTATCCAATCCGGATTATAGAGGAGGAGAAGAGGAAT
ATGAATAAACAGTCTAAGTCCAGCATTGTGGAGGAGGGAGAGGCTAAGAGGCATTGGCTGCATGGGGAGGAGGTGGAGAAATTCAAAGCTTATAAGGGTTCTGCTGATAG
AGGCCGCCGACGAACTGACCGCGCTGAAGCTGCCGAACCATCGACTAAGTTTCCTTGGAGTAGCATGAGATCTGCTAGG
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGCAGACTCGGAAGAAGAGTTGTTCACTTCGCAAATCTTCCAATCAAGCTTCTTATGCCGACCTCCTTCTCCAACATCACAGAAATTGCCCTCAAAACTATTCC
CTCTGCTTCCAAAATCGAAATCAAGCGCGTCCTTGAGAGCCTCTACGGCTTTGAGGTCGATAAAGTTCGAACTCTCAATATGGAGGGGAAGAAGAAGAAGCGAGGAGGGC
TTTTGATCGCAAAGCCCGATTACAAGAAAGCCTATGTTACTCTCAGGAATCCCTTGTCAATCTCTCCGGACGTCTATCCAATCCGGATTATAGAGGAGGAGAAGAGGAAT
ATGAATAAACAGTCTAAGTCCAGCATTGTGGAGGAGGGAGAGGCTAAGAGGCATTGGCTGCATGGGGAGGAGGTGGAGAAATTCAAAGCTTATAAGGGTTCTGCTGATAG
AGGCCGCCGACGAACTGACCGCGCTGAAGCTGCCGAACCATCGACTAAGTTTCCTTGGAGTAGCATGAGATCTGCTAGG
Protein sequenceShow/hide protein sequence
MGSRLGRRVVHFANLPIKLLMPTSFSNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDVYPIRIIEEEKRN
MNKQSKSSIVEEGEAKRHWLHGEEVEKFKAYKGSADRGRRRTDRAEAAEPSTKFPWSSMRSAR