; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS012636 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012636
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMyb transcription factor
Genome locationscaffold63:2234629..2235401
RNA-Seq ExpressionMS012636
SyntenyMS012636
Gene Ontology termsNA
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5961907.1 hypothetical protein HYC85_003116 [Camellia sinensis]4.2e-6082.09Show/hide
Query:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL
        MGRSP     CD  G+K+G WTP+EDHKLV +I +HGH SWRALPKLAGLNRCGKSCRLRWTNYLRP IKRGKFSQEE+QTILNLHSILGNKWS IA+HL
Subjt:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL

Query:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITHMPTT
        PGRTDNEIKN WNTHLKKKLIQMGFDP+TH P T
Subjt:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITHMPTT

XP_021685650.1 transcription factor MYB16-like [Hevea brasiliensis]5.4e-6081.34Show/hide
Query:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL
        MGRSP     CD  G+K+G WTP+ED KLV +I +HGHRSWRALP+LAGLNRCGKSCRLRWTNYLRP IKRGKFSQEE+QTILNLHS+LGNKWS IASHL
Subjt:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL

Query:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITHMPTT
        PGRTDNEIKN WNTHLKKKLIQMGFDP+TH P T
Subjt:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITHMPTT

XP_028056542.1 transcription factor MYB93-like [Camellia sinensis]4.2e-6082.09Show/hide
Query:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL
        MGRSP     CD  G+K+G WTP+EDHKLV +I +HGH SWRALPKLAGLNRCGKSCRLRWTNYLRP IKRGKFSQEE+QTILNLHSILGNKWS IA+HL
Subjt:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL

Query:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITHMPTT
        PGRTDNEIKN WNTHLKKKLIQMGFDP+TH P T
Subjt:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITHMPTT

XP_028069886.1 transcription factor MYB93-like [Camellia sinensis]4.2e-6082.09Show/hide
Query:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL
        MGRSP     CD  G+K+G WTP+EDHKLV +I +HGH SWRALPKLAGLNRCGKSCRLRWTNYLRP IKRGKFSQEE+QTILNLHSILGNKWS IA+HL
Subjt:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL

Query:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITHMPTT
        PGRTDNEIKN WNTHLKKKLIQMGFDP+TH P T
Subjt:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITHMPTT

XP_028776582.1 transcription factor MYB53 [Prosopis alba]1.9e-6082.84Show/hide
Query:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL
        MGRSP     CD IG+K+G WTP+ED KLV FI +HGHRSWRALPKLAGLNRCGKSCRLRWTNYLRP IKRGKFSQEEQQTILNLH+ILGNKWS IAS L
Subjt:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL

Query:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITHMPTT
        PGRTDNEIKN WNTHLKKKLIQMG+DP+TH P T
Subjt:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITHMPTT

TrEMBL top hitse value%identityAlignment
A0A067LQI0 MYB family protein4.5e-6081.34Show/hide
Query:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL
        MGRSP     CD  G+K+G WTP+ED KLV FI QHGH SWRALPKLAGLNRCGKSCRLRWTNYLRP IKRGKFSQ+E+QTILNLHS+LGNKWS IASHL
Subjt:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL

Query:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITHMPTT
        PGRTDNEIKN WNTHLKKKLIQMG+DP+TH P T
Subjt:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITHMPTT

A0A4S4EDS7 Uncharacterized protein2.0e-6082.09Show/hide
Query:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL
        MGRSP     CD  G+K+G WTP+EDHKLV +I +HGH SWRALPKLAGLNRCGKSCRLRWTNYLRP IKRGKFSQEE+QTILNLHSILGNKWS IA+HL
Subjt:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL

Query:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITHMPTT
        PGRTDNEIKN WNTHLKKKLIQMGFDP+TH P T
Subjt:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITHMPTT

A0A4S4EUY9 Uncharacterized protein2.0e-6082.09Show/hide
Query:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL
        MGRSP     CD  G+K+G WTP+EDHKLV +I +HGH SWRALPKLAGLNRCGKSCRLRWTNYLRP IKRGKFSQEE+QTILNLHSILGNKWS IA+HL
Subjt:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL

Query:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITHMPTT
        PGRTDNEIKN WNTHLKKKLIQMGFDP+TH P T
Subjt:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITHMPTT

A0A6A6LHW6 Uncharacterized protein2.6e-6081.34Show/hide
Query:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL
        MGRSP     CD  G+K+G WTP+ED KLV +I +HGHRSWRALP+LAGLNRCGKSCRLRWTNYLRP IKRGKFSQEE+QTILNLHS+LGNKWS IASHL
Subjt:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL

Query:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITHMPTT
        PGRTDNEIKN WNTHLKKKLIQMGFDP+TH P T
Subjt:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITHMPTT

A0A7J7IBE5 Uncharacterized protein2.0e-6082.09Show/hide
Query:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL
        MGRSP     CD  G+K+G WTP+EDHKLV +I +HGH SWRALPKLAGLNRCGKSCRLRWTNYLRP IKRGKFSQEE+QTILNLHSILGNKWS IA+HL
Subjt:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL

Query:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITHMPTT
        PGRTDNEIKN WNTHLKKKLIQMGFDP+TH P T
Subjt:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITHMPTT

SwissProt top hitse value%identityAlignment
Q9FJP2 Transcription factor MYB533.7e-5976.87Show/hide
Query:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL
        MGRSP    S D  G+K+G W P+ED KL+ +I +HGH SW ALPKLAGLNRCGKSCRLRWTNYLRP IKRGKFS EE++TILNLH++LGNKWS+IASHL
Subjt:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL

Query:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITHMPTT
        PGRTDNEIKN WNTHLKKKLIQMGFDP+TH P T
Subjt:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITHMPTT

Q9LE63 Transcription factor MYB1061.0e-5370Show/hide
Query:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL
        MGRSP     CD  G+K+G WTP+ED KL+A+I +HGH SWR+LP+ AGL RCGKSCRLRWTNYLRP IKRGKF+ +E+QTI+ LH++LGN+WS IA+HL
Subjt:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL

Query:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITH
        P RTDNEIKN WNTHLKK+LI+MG DP+TH
Subjt:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITH

Q9LXF1 Transcription factor MYB169.3e-5568.94Show/hide
Query:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL
        MGRSP     CD +G+K+G WTP+ED KL+A+I +HGH SWR+LP+ AGL+RCGKSCRLRWTNYLRP IKRGKF+ +E+QTI+ LH++LGN+WS IA+HL
Subjt:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL

Query:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITHMP
        P RTDNEIKN WNTHLKK+L++MG DP+TH P
Subjt:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITHMP

Q9S9Z2 Transcription factor MYB931.8e-5876.87Show/hide
Query:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL
        MGRSP     CD  G+K+G WTP+ED KL+ +I +HGH SWRALPKLA LNRCGKSCRLRWTNYLRP IKRGKFS EE+QTIL+LHSILGNKWS IA+HL
Subjt:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL

Query:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITHMPTT
         GRTDNEIKN WNTHLKKKLIQMG DP+TH P T
Subjt:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITHMPTT

Q9SBF3 Transcription factor MYB922.4e-5876.12Show/hide
Query:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL
        MGRSP      D  G+K+G WTP ED KLV ++ +HGH SWRALPKLAGLNRCGKSCRLRWTNYLRP IKRG+FS +E+QTILNLHS+LGNKWS IA+ L
Subjt:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL

Query:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITHMPTT
        PGRTDNEIKN WNTHLKKKLIQMGFDP+TH P T
Subjt:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITHMPTT

Arabidopsis top hitse value%identityAlignment
AT1G34670.1 myb domain protein 931.3e-5976.87Show/hide
Query:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL
        MGRSP     CD  G+K+G WTP+ED KL+ +I +HGH SWRALPKLA LNRCGKSCRLRWTNYLRP IKRGKFS EE+QTIL+LHSILGNKWS IA+HL
Subjt:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL

Query:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITHMPTT
         GRTDNEIKN WNTHLKKKLIQMG DP+TH P T
Subjt:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITHMPTT

AT3G02940.1 myb domain protein 1071.9e-5873.88Show/hide
Query:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL
        MGRSP     CD  G+K+G WTP+ED KL+  I +HGH SWRALPK AGLNRCGKSCRLRWTNYLRP IKRG F+ EE+QTI+NLHS+LGNKWS IA HL
Subjt:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL

Query:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITHMPTT
        PGRTDNEIKN WNTH++KKLIQMG DP+TH P T
Subjt:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITHMPTT

AT5G10280.1 myb domain protein 921.7e-5976.12Show/hide
Query:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL
        MGRSP      D  G+K+G WTP ED KLV ++ +HGH SWRALPKLAGLNRCGKSCRLRWTNYLRP IKRG+FS +E+QTILNLHS+LGNKWS IA+ L
Subjt:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL

Query:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITHMPTT
        PGRTDNEIKN WNTHLKKKLIQMGFDP+TH P T
Subjt:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITHMPTT

AT5G16770.1 myb domain protein 97.8e-5772.39Show/hide
Query:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL
        MGRSP     CD  G+K+G WT +ED KL+  I +HGH SWRALPK AGLNRCGKSCRLRWTNYLRP IKRG F++EE+QTI+NLHS+LGNKWS IA +L
Subjt:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL

Query:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITHMPTT
        PGRTDNEIKN WNTHL+KKL+QMG DP+TH P T
Subjt:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITHMPTT

AT5G65230.1 myb domain protein 532.6e-6076.87Show/hide
Query:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL
        MGRSP    S D  G+K+G W P+ED KL+ +I +HGH SW ALPKLAGLNRCGKSCRLRWTNYLRP IKRGKFS EE++TILNLH++LGNKWS+IASHL
Subjt:  MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHL

Query:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITHMPTT
        PGRTDNEIKN WNTHLKKKLIQMGFDP+TH P T
Subjt:  PGRTDNEIKNLWNTHLKKKLIQMGFDPITHMPTT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGATCTCCTTCTTATTCTTCTTCCTGTGATGGAATTGGGGTGAAACGAGGCGCTTGGACTCCGCAAGAAGATCACAAACTTGTTGCCTTTATTACTCAACATGG
CCATCGTAGCTGGCGAGCCCTCCCCAAGCTCGCTGGGCTTAATCGATGTGGGAAGAGTTGCAGACTGCGATGGACAAACTACCTTCGGCCAGGCATAAAGAGAGGAAAAT
TCTCTCAAGAAGAGCAACAAACCATCCTCAATCTCCATTCAATCCTTGGAAACAAATGGTCCGTGATTGCAAGCCATCTTCCCGGACGAACGGATAACGAAATAAAGAAT
TTATGGAACACCCATCTGAAGAAGAAGCTCATTCAAATGGGGTTTGATCCCATCACTCACATGCCCACCACT
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGATCTCCTTCTTATTCTTCTTCCTGTGATGGAATTGGGGTGAAACGAGGCGCTTGGACTCCGCAAGAAGATCACAAACTTGTTGCCTTTATTACTCAACATGG
CCATCGTAGCTGGCGAGCCCTCCCCAAGCTCGCTGGGCTTAATCGATGTGGGAAGAGTTGCAGACTGCGATGGACAAACTACCTTCGGCCAGGCATAAAGAGAGGAAAAT
TCTCTCAAGAAGAGCAACAAACCATCCTCAATCTCCATTCAATCCTTGGAAACAAATGGTCCGTGATTGCAAGCCATCTTCCCGGACGAACGGATAACGAAATAAAGAAT
TTATGGAACACCCATCTGAAGAAGAAGCTCATTCAAATGGGGTTTGATCCCATCACTCACATGCCCACCACT
Protein sequenceShow/hide protein sequence
MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHLPGRTDNEIKN
LWNTHLKKKLIQMGFDPITHMPTT