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MS012685 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012685
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionThiamine-phosphate synthase
Genome locationscaffold63:2624356..2625402
RNA-Seq ExpressionMS012685
SyntenyMS012685
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022136836.1 uncharacterized protein LOC111008437 isoform X1 [Momordica charantia]1.3e-5286.55Show/hide
Query:  GLVIRFFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRIQEVGLRGLTSKRHMKIVMRWMKERQKLRLMCKHIGPYKQFLYTTWFT
        G  IR+FATKPKPKMKPIEL TPPEQTQTITRVIFDIV+EHGPLTIAETWDR+QEVGLRGLTSKRHMKIVMRWM+ERQKLRLMC HIG +KQFLYTTWFT
Subjt:  GLVIRFFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRIQEVGLRGLTSKRHMKIVMRWMKERQKLRLMCKHIGPYKQFLYTTWFT

Query:  KPNFGQAKPQGHNSSSSQS
        K NFGQ+KPQG NSS  +S
Subjt:  KPNFGQAKPQGHNSSSSQS

XP_022136839.1 uncharacterized protein LOC111008437 isoform X2 [Momordica charantia]1.2e-5085.71Show/hide
Query:  GLVIRFFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRIQEVGLRGLTSKRHMKIVMRWMKERQKLRLMCKHIGPYKQFLYTTWFT
        G  IR+FATKPKPKMKPIEL TPPEQTQTITRVIFDIV+EHGPLTIAETWDR+Q VGLRGLTSKRHMKIVMRWM+ERQKLRLMC HIG +KQFLYTTWFT
Subjt:  GLVIRFFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRIQEVGLRGLTSKRHMKIVMRWMKERQKLRLMCKHIGPYKQFLYTTWFT

Query:  KPNFGQAKPQGHNSSSSQS
        K NFGQ+KPQG NSS  +S
Subjt:  KPNFGQAKPQGHNSSSSQS

XP_022942849.1 uncharacterized protein LOC111447756 [Cucurbita moschata]8.3e-5591.6Show/hide
Query:  IRFFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRIQEVGLRGLTSKRHMKIVMRWMKERQKLRLMCKHIGPYKQFLYTTWFTKPN
        IR+FATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDR+QEVGLRGLTSKRHMKIVMRWM+ERQKLRLMC H+GP KQFLYTTWFTKPN
Subjt:  IRFFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRIQEVGLRGLTSKRHMKIVMRWMKERQKLRLMCKHIGPYKQFLYTTWFTKPN

Query:  FGQAKPQGHNSSSSQSKSP
        FGQAKPQG N  SSQ KSP
Subjt:  FGQAKPQGHNSSSSQSKSP

XP_022983421.1 uncharacterized protein LOC111482027 [Cucurbita maxima]1.8e-5490.76Show/hide
Query:  IRFFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRIQEVGLRGLTSKRHMKIVMRWMKERQKLRLMCKHIGPYKQFLYTTWFTKPN
        IR+FATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDR+QEVGLRGLTSKRHMKIVMRWM+ERQKLRL+C H+GP KQFLYTTWFTKPN
Subjt:  IRFFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRIQEVGLRGLTSKRHMKIVMRWMKERQKLRLMCKHIGPYKQFLYTTWFTKPN

Query:  FGQAKPQGHNSSSSQSKSP
        FGQAKPQG N  SSQ KSP
Subjt:  FGQAKPQGHNSSSSQSKSP

XP_038881247.1 uncharacterized protein LOC120072805 [Benincasa hispida]1.0e-5287.39Show/hide
Query:  IRFFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRIQEVGLRGLTSKRHMKIVMRWMKERQKLRLMCKHIGPYKQFLYTTWFTKPN
        +R+FATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDR+QEVGLRGLTSKRHMKIVMRWM+ERQKLRL+C H+GP+KQFLYTTWFTKPN
Subjt:  IRFFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRIQEVGLRGLTSKRHMKIVMRWMKERQKLRLMCKHIGPYKQFLYTTWFTKPN

Query:  FGQAKPQGHNSSSSQSKSP
        FGQAK  G N  +SQ KSP
Subjt:  FGQAKPQGHNSSSSQSKSP

TrEMBL top hitse value%identityAlignment
A0A0A0KY02 Uncharacterized protein1.1e-4981.97Show/hide
Query:  GLVIRFFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRIQEVGLRGLTSKRHMKIVMRWMKERQKLRLMCKHIGPYKQFLYTTWFT
        G  +R FATKPKPKMKPIELKTPPEQTQTITR IFDIV+EHGPLTIAETWDR+QEVGLRGLTSKRHMKIVMRWM+ERQK+RLMC H+GP+KQFLYTTWFT
Subjt:  GLVIRFFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRIQEVGLRGLTSKRHMKIVMRWMKERQKLRLMCKHIGPYKQFLYTTWFT

Query:  KPNFGQAKPQGHNSSSSQSKSP
        KPNF QAK    N   SQ K P
Subjt:  KPNFGQAKPQGHNSSSSQSKSP

A0A6J1C5G7 uncharacterized protein LOC111008437 isoform X26.0e-5185.71Show/hide
Query:  GLVIRFFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRIQEVGLRGLTSKRHMKIVMRWMKERQKLRLMCKHIGPYKQFLYTTWFT
        G  IR+FATKPKPKMKPIEL TPPEQTQTITRVIFDIV+EHGPLTIAETWDR+Q VGLRGLTSKRHMKIVMRWM+ERQKLRLMC HIG +KQFLYTTWFT
Subjt:  GLVIRFFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRIQEVGLRGLTSKRHMKIVMRWMKERQKLRLMCKHIGPYKQFLYTTWFT

Query:  KPNFGQAKPQGHNSSSSQS
        K NFGQ+KPQG NSS  +S
Subjt:  KPNFGQAKPQGHNSSSSQS

A0A6J1C6J6 uncharacterized protein LOC111008437 isoform X16.4e-5386.55Show/hide
Query:  GLVIRFFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRIQEVGLRGLTSKRHMKIVMRWMKERQKLRLMCKHIGPYKQFLYTTWFT
        G  IR+FATKPKPKMKPIEL TPPEQTQTITRVIFDIV+EHGPLTIAETWDR+QEVGLRGLTSKRHMKIVMRWM+ERQKLRLMC HIG +KQFLYTTWFT
Subjt:  GLVIRFFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRIQEVGLRGLTSKRHMKIVMRWMKERQKLRLMCKHIGPYKQFLYTTWFT

Query:  KPNFGQAKPQGHNSSSSQS
        K NFGQ+KPQG NSS  +S
Subjt:  KPNFGQAKPQGHNSSSSQS

A0A6J1FSI5 uncharacterized protein LOC1114477564.0e-5591.6Show/hide
Query:  IRFFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRIQEVGLRGLTSKRHMKIVMRWMKERQKLRLMCKHIGPYKQFLYTTWFTKPN
        IR+FATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDR+QEVGLRGLTSKRHMKIVMRWM+ERQKLRLMC H+GP KQFLYTTWFTKPN
Subjt:  IRFFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRIQEVGLRGLTSKRHMKIVMRWMKERQKLRLMCKHIGPYKQFLYTTWFTKPN

Query:  FGQAKPQGHNSSSSQSKSP
        FGQAKPQG N  SSQ KSP
Subjt:  FGQAKPQGHNSSSSQSKSP

A0A6J1J258 uncharacterized protein LOC1114820278.9e-5590.76Show/hide
Query:  IRFFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRIQEVGLRGLTSKRHMKIVMRWMKERQKLRLMCKHIGPYKQFLYTTWFTKPN
        IR+FATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDR+QEVGLRGLTSKRHMKIVMRWM+ERQKLRL+C H+GP KQFLYTTWFTKPN
Subjt:  IRFFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRIQEVGLRGLTSKRHMKIVMRWMKERQKLRLMCKHIGPYKQFLYTTWFTKPN

Query:  FGQAKPQGHNSSSSQSKSP
        FGQAKPQG N  SSQ KSP
Subjt:  FGQAKPQGHNSSSSQSKSP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73940.1 unknown protein4.7e-1634.74Show/hide
Query:  LVIRFFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRIQEVGLRGLTSKRHMKIVMRWMKERQKLRLMCKHIGPYKQFLYT
        L++R+ + +    ++ I  K P ++   I+  ++D+ + HGPL++  TW R QE G+ GL SK HMK++++WM+ ++ L+L+C  +G  K+F +T
Subjt:  LVIRFFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRIQEVGLRGLTSKRHMKIVMRWMKERQKLRLMCKHIGPYKQFLYT

AT5G49410.1 unknown protein1.0e-4772.36Show/hide
Query:  LGLVIRFFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRIQEVGLRGLTSKRHMKIVMRWMKERQKLRLMCKHIGPYKQFLYTTWF
        +G++ R FATKPKPKMKPIEL TPPEQTQTITRVIFDI+++HGPLTIAETWDR++EVGLRGLTSKRHMKI++RWM+ERQKL+L+C H+GP+KQFLYTTWF
Subjt:  LGLVIRFFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRIQEVGLRGLTSKRHMKIVMRWMKERQKLRLMCKHIGPYKQFLYTTWF

Query:  TKPNFGQAKPQGHNSSSSQSKSP
        TK          HN SS   K P
Subjt:  TKPNFGQAKPQGHNSSSSQSKSP

AT5G49410.2 unknown protein1.0e-4772.36Show/hide
Query:  LGLVIRFFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRIQEVGLRGLTSKRHMKIVMRWMKERQKLRLMCKHIGPYKQFLYTTWF
        +G++ R FATKPKPKMKPIEL TPPEQTQTITRVIFDI+++HGPLTIAETWDR++EVGLRGLTSKRHMKI++RWM+ERQKL+L+C H+GP+KQFLYTTWF
Subjt:  LGLVIRFFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRIQEVGLRGLTSKRHMKIVMRWMKERQKLRLMCKHIGPYKQFLYTTWF

Query:  TKPNFGQAKPQGHNSSSSQSKSP
        TK          HN SS   K P
Subjt:  TKPNFGQAKPQGHNSSSSQSKSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGTTTGGGACTGGTAATAAGGTTTTTCGCGACGAAGCCAAAGCCGAAGATGAAGCCAATAGAGCTAAAAACTCCACCGGAACAAACACAGACGATCACTAGAGTCATCTT
CGACATTGTTAGGGAGCATGGTCCGCTAACCATAGCCGAAACTTGGGACCGCATTCAGGAAGTTGGTTTGAGAGGATTAACAAGCAAAAGGCACATGAAAATAGTAATGA
GATGGATGAAGGAACGGCAGAAGTTAAGATTAATGTGCAAGCACATAGGACCTTATAAGCAGTTTCTATATACTACCTGGTTCACGAAACCCAACTTCGGGCAGGCAAAG
CCACAGGGGCATAATTCTTCTTCTTCCCAATCGAAAAGCCCT
mRNA sequenceShow/hide mRNA sequence
TGTTTGGGACTGGTAATAAGGTTTTTCGCGACGAAGCCAAAGCCGAAGATGAAGCCAATAGAGCTAAAAACTCCACCGGAACAAACACAGACGATCACTAGAGTCATCTT
CGACATTGTTAGGGAGCATGGTCCGCTAACCATAGCCGAAACTTGGGACCGCATTCAGGAAGTTGGTTTGAGAGGATTAACAAGCAAAAGGCACATGAAAATAGTAATGA
GATGGATGAAGGAACGGCAGAAGTTAAGATTAATGTGCAAGCACATAGGACCTTATAAGCAGTTTCTATATACTACCTGGTTCACGAAACCCAACTTCGGGCAGGCAAAG
CCACAGGGGCATAATTCTTCTTCTTCCCAATCGAAAAGCCCT
Protein sequenceShow/hide protein sequence
CLGLVIRFFATKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRIQEVGLRGLTSKRHMKIVMRWMKERQKLRLMCKHIGPYKQFLYTTWFTKPNFGQAK
PQGHNSSSSQSKSP