CuGenDBv2

Gene ID	MS012686
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial
Genome location	scaffold63:2626279..2626581
RNA-Seq Expression	MS012686
Synteny	MS012686
Gene Ontology terms	GO:0006099 - tricarboxylic acid cycle (biological process) GO:0022900 - electron transport chain (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0008177 - succinate dehydrogenase (ubiquinone) activity (molecular function) GO:0050660 - flavin adenine dinucleotide binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

GAV68772.1 hypothetical protein CFOL_v3_12275 [Cephalotus follicularis]

4.7e-15

75.71

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Query:  DVMSHSFGEGYATRSDEEGFGGVYSDQNQSFRNTDGDRINQDINQ--PGYDKSQGSEVKEKEKARHQTNA
        DVMSHSFGEGYATRSDEEGFGG+Y D NQS  N   D   +DI++  P YDKSQGSEVKEKEKARHQTNA
Subjt:  DVMSHSFGEGYATRSDEEGFGGVYSDQNQSFRNTDGDRINQDINQ--PGYDKSQGSEVKEKEKARHQTNA

GAY42715.1 hypothetical protein CUMW_069010 [Citrus unshiu]

3.6e-15

73.53

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Query:  DVMSHSFGEGYATRSDEEGFGGVYSDQNQSFRNTDGDRINQDINQPGYDKSQGSEVKEKEKARHQTNA
        DVMSHSFGEGYATRSDEEGFGG+Y   NQ F N D    + + N P +DKSQGSEVKEKEKARHQTNA
Subjt:  DVMSHSFGEGYATRSDEEGFGGVYSDQNQSFRNTDGDRINQDINQPGYDKSQGSEVKEKEKARHQTNA

KAF3959985.1 hypothetical protein CMV_015254 [Castanea mollissima]

2.3e-14

70.59

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Query:  DVMSHSFGEGYATRSDEEGFGGVYSDQNQSFRNTDGDRINQDINQPGYDKSQGSEVKEKEKARHQTNA
        DVMSHSFG+GYATRSDEEGFGG+Y  +NQSF+    +    + N P YDK+QGSEVKEKEKARHQTNA
Subjt:  DVMSHSFGEGYATRSDEEGFGGVYSDQNQSFRNTDGDRINQDINQPGYDKSQGSEVKEKEKARHQTNA

XP_006425685.1 uncharacterized protein LOC18037186 [Citrus clementina]

2.7e-15

73.53

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Query:  DVMSHSFGEGYATRSDEEGFGGVYSDQNQSFRNTDGDRINQDINQPGYDKSQGSEVKEKEKARHQTNA
        DVMSHSFGEGYATRSDEEGFGG+Y   NQ F N D    + + N P +DKSQGSEVKEKEKARHQTNA
Subjt:  DVMSHSFGEGYATRSDEEGFGGVYSDQNQSFRNTDGDRINQDINQPGYDKSQGSEVKEKEKARHQTNA

XP_022136799.1 uncharacterized protein LOC111008409 [Momordica charantia]

2.5e-29

100

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Query:  DVMSHSFGEGYATRSDEEGFGGVYSDQNQSFRNTDGDRINQDINQPGYDKSQGSEVKEKEKARHQTNAG
        DVMSHSFGEGYATRSDEEGFGGVYSDQNQSFRNTDGDRINQDINQPGYDKSQGSEVKEKEKARHQTNAG
Subjt:  DVMSHSFGEGYATRSDEEGFGGVYSDQNQSFRNTDGDRINQDINQPGYDKSQGSEVKEKEKARHQTNAG

TrEMBL top hits

e value

%identity

Alignment

A0A067GIH8 Uncharacterized protein

1.3e-15

73.53

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Query:  DVMSHSFGEGYATRSDEEGFGGVYSDQNQSFRNTDGDRINQDINQPGYDKSQGSEVKEKEKARHQTNA
        DVMSHSFGEGYATRSDEEGFGG+Y   NQ F N D    + + N P +DKSQGSEVKEKEKARHQTNA
Subjt:  DVMSHSFGEGYATRSDEEGFGGVYSDQNQSFRNTDGDRINQDINQPGYDKSQGSEVKEKEKARHQTNA

A0A1Q3BLS8 Uncharacterized protein

2.3e-15

75.71

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Query:  DVMSHSFGEGYATRSDEEGFGGVYSDQNQSFRNTDGDRINQDINQ--PGYDKSQGSEVKEKEKARHQTNA
        DVMSHSFGEGYATRSDEEGFGG+Y D NQS  N   D   +DI++  P YDKSQGSEVKEKEKARHQTNA
Subjt:  DVMSHSFGEGYATRSDEEGFGGVYSDQNQSFRNTDGDRINQDINQ--PGYDKSQGSEVKEKEKARHQTNA

A0A2H5NSJ8 Uncharacterized protein

1.7e-15

73.53

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Query:  DVMSHSFGEGYATRSDEEGFGGVYSDQNQSFRNTDGDRINQDINQPGYDKSQGSEVKEKEKARHQTNA
        DVMSHSFGEGYATRSDEEGFGG+Y   NQ F N D    + + N P +DKSQGSEVKEKEKARHQTNA
Subjt:  DVMSHSFGEGYATRSDEEGFGGVYSDQNQSFRNTDGDRINQDINQPGYDKSQGSEVKEKEKARHQTNA

A0A6J1C5D2 uncharacterized protein LOC111008409

1.2e-29

100

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Query:  DVMSHSFGEGYATRSDEEGFGGVYSDQNQSFRNTDGDRINQDINQPGYDKSQGSEVKEKEKARHQTNAG
        DVMSHSFGEGYATRSDEEGFGGVYSDQNQSFRNTDGDRINQDINQPGYDKSQGSEVKEKEKARHQTNAG
Subjt:  DVMSHSFGEGYATRSDEEGFGGVYSDQNQSFRNTDGDRINQDINQPGYDKSQGSEVKEKEKARHQTNAG

V4SJ98 Uncharacterized protein

1.3e-15

73.53

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Query:  DVMSHSFGEGYATRSDEEGFGGVYSDQNQSFRNTDGDRINQDINQPGYDKSQGSEVKEKEKARHQTNA
        DVMSHSFGEGYATRSDEEGFGG+Y   NQ F N D    + + N P +DKSQGSEVKEKEKARHQTNA
Subjt:  DVMSHSFGEGYATRSDEEGFGGVYSDQNQSFRNTDGDRINQDINQPGYDKSQGSEVKEKEKARHQTNA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G66780.1 unknown protein

1.9e-14

63.24

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Query:  DVMSHSFGEGYATRSDEEGFGGVYSDQNQSFRNTDGDRINQDINQPGYDKSQGSEVKEKEKARHQTNA
        DVMSHS+GEGYATRSDEEGFGG+Y   NQ+ +    + I++  N P YDK+QGSE KEKEKAR+QT +
Subjt:  DVMSHSFGEGYATRSDEEGFGGVYSDQNQSFRNTDGDRINQDINQPGYDKSQGSEVKEKEKARHQTNA

Sequences

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CDS sequence

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GACGTGATGTCGCATTCGTTTGGAGAAGGATATGCGACGCGGTCGGACGAAGAAGGATTTGGCGGAGTCTACAGTGATCAGAACCAGTCGTTTCGCAACACTGATGGCGA
TCGGATTAATCAAGATATCAATCAGCCTGGGTATGATAAGAGTCAAGGGAGTGAAGTGAAGGAGAAGGAGAAAGCCCGACATCAAACCAATGCAGGG

mRNA sequence

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Protein sequence

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DVMSHSFGEGYATRSDEEGFGGVYSDQNQSFRNTDGDRINQDINQPGYDKSQGSEVKEKEKARHQTNAG

MS012686 (gene) of Bitter gourd (TR) v1 genome