; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS012694 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012694
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description40S ribosomal protein SA
Genome locationscaffold63:2703072..2704398
RNA-Seq ExpressionMS012694
SyntenyMS012694
Gene Ontology termsGO:0000028 - ribosomal small subunit assembly (biological process)
GO:0002181 - cytoplasmic translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001865 - Ribosomal protein S2
IPR005707 - Ribosomal protein S2, eukaryotic/archaeal
IPR018130 - Ribosomal protein S2, conserved site
IPR023591 - Ribosomal protein S2, flavodoxin-like domain superfamily
IPR027498 - Ribosomal protein S2, eukaryotic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600605.1 40S ribosomal protein SA, partial [Cucurbita argyrosperma subsp. sororia]4.3e-14192.34Show/hide
Query:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGT QRQL+QKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTW+KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+R GHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVP----AAAAAPASNVEWAQEP
        VDLFFYREPEEAKE EEE+AVAPPDYGIADFGAAPL  D+W  DAQW A D+VP    AAAAAP SNVEWA EP
Subjt:  VDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVP----AAAAAPASNVEWAQEP

XP_008453731.1 PREDICTED: 40S ribosomal protein SA-like [Cucumis melo]2.5e-14192.96Show/hide
Query:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATG  QRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTW+KLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+R G+KWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVPAAAAAPASNVEWAQEP
        VDLFFYREPEE KE EEEEAVAPPDYGIADFG+APLAVDQW PDAQW AS+V P AAAA  SNVEWAQEP
Subjt:  VDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVPAAAAAPASNVEWAQEP

XP_022136902.1 40S ribosomal protein SA-like [Momordica charantia]1.9e-152100Show/hide
Query:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVPAAAAAPASNVEWAQEP
        VDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVPAAAAAPASNVEWAQEP
Subjt:  VDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVPAAAAAPASNVEWAQEP

XP_022942879.1 40S ribosomal protein SA-like [Cucurbita moschata]2.5e-14193.01Show/hide
Query:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGT QRQL+QKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTW+KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+R GHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVP--AAAAAPASNVEWAQEP
        VDLFFYREPEEAKE EEE+AVAPPDYGIADFGAAPL  D+W  DAQW A D+VP  AAAAAP SNVEWA EP
Subjt:  VDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVP--AAAAAPASNVEWAQEP

XP_022982113.1 40S ribosomal protein SA-like [Cucurbita maxima]2.5e-14193.01Show/hide
Query:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGT QRQL+QKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTW+KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+R GHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVP--AAAAAPASNVEWAQEP
        VDLFFYREPEEAKE EEE+AVAPPDYGIADFGAAPL  D+W  DAQW A D+VP  AAAAAP SNVEWA EP
Subjt:  VDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVP--AAAAAPASNVEWAQEP

TrEMBL top hitse value%identityAlignment
A0A1S3BXR8 40S ribosomal protein SA1.2e-14192.96Show/hide
Query:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATG  QRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTW+KLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+R G+KWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVPAAAAAPASNVEWAQEP
        VDLFFYREPEE KE EEEEAVAPPDYGIADFG+APLAVDQW PDAQW AS+V P AAAA  SNVEWAQEP
Subjt:  VDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVPAAAAAPASNVEWAQEP

A0A5A7TNP4 40S ribosomal protein SA1.2e-14192.96Show/hide
Query:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATG  QRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTW+KLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+R G+KWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVPAAAAAPASNVEWAQEP
        VDLFFYREPEE KE EEEEAVAPPDYGIADFG+APLAVDQW PDAQW AS+V P AAAA  SNVEWAQEP
Subjt:  VDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVPAAAAAPASNVEWAQEP

A0A6J1C6Q9 40S ribosomal protein SA9.0e-153100Show/hide
Query:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVPAAAAAPASNVEWAQEP
        VDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVPAAAAAPASNVEWAQEP
Subjt:  VDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVPAAAAAPASNVEWAQEP

A0A6J1FSL7 40S ribosomal protein SA1.2e-14193.01Show/hide
Query:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGT QRQL+QKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTW+KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+R GHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVP--AAAAAPASNVEWAQEP
        VDLFFYREPEEAKE EEE+AVAPPDYGIADFGAAPL  D+W  DAQW A D+VP  AAAAAP SNVEWA EP
Subjt:  VDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVP--AAAAAPASNVEWAQEP

A0A6J1J410 40S ribosomal protein SA1.2e-14193.01Show/hide
Query:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGT QRQL+QKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTW+KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+R GHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVP--AAAAAPASNVEWAQEP
        VDLFFYREPEEAKE EEE+AVAPPDYGIADFGAAPL  D+W  DAQW A D+VP  AAAAAP SNVEWA EP
Subjt:  VDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVP--AAAAAPASNVEWAQEP

SwissProt top hitse value%identityAlignment
A5BUU4 40S ribosomal protein SA5.7e-12084.7Show/hide
Query:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MAT T  R LSQKE DIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTW+KLQ+AARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR TI  GHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEEE-EEAVAPPDYGIADFGAAPL----AVDQWAP--DA-QWGASDVVPAAAAAPA
        VDLFFYREPEE KE+E +E VA PDYGI D+ A  L      D  AP  DA QWGA   VPA A  PA
Subjt:  VDLFFYREPEEAKEEE-EEAVAPPDYGIADFGAAPL----AVDQWAP--DA-QWGASDVVPAAAAAPA

O22518 40S ribosomal protein SA5.2e-12182.26Show/hide
Query:  ATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAI
        A     RQLSQKEADIQMMLAA+VHLGTKNC+FQMERY+FKRRNDGIYIINLGKTW+KLQ+AARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAI
Subjt:  ATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAI

Query:  AGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMV
        AGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIR G KWDVMV
Subjt:  AGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMV

Query:  DLFFYREPEEAKEEEEEAVAPPDYGIADFGAAPLAVD-QWAPDAQWGASDVVPAAAAAPASNVEW
        DLFFYREPEEAK++EEE     DY I DF A  +A D QW        SD VP    A    V W
Subjt:  DLFFYREPEEAKEEEEEAVAPPDYGIADFGAAPLAVD-QWAPDAQWGASDVVPAAAAAPASNVEW

O65751 40S ribosomal protein SA5.2e-12183.03Show/hide
Query:  MATGTA-QRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAH
        MAT TA  RQL+QKEADIQMMLAA+VHLGTKNCNFQMERY+FKRRNDGIYIINLGKTWDKL +AAR+IVAIEN QDIIVQSARPYGQRAVLKFAQYTGAH
Subjt:  MATGTA-QRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM YVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIR G KWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAPLAVD-QW--APDAQWGASDVVP-AAAAAPASNVEWA
        MVDLFFYREPEEAK+ EE+ VA PDY IADF  + +  D QW  A D  W  +D VP    A PA  V WA
Subjt:  MVDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAPLAVD-QW--APDAQWGASDVVP-AAAAAPASNVEWA

O80377 40S ribosomal protein SA6.7e-12182.89Show/hide
Query:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MA+G   R+LS  EADIQMM AAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTW+KL +AARVIV+IENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG I  GHKW+VM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAPL-AVDQW--APDAQWGASDVVPAAAAAPA
        VDLFFYREPEE K++EEE +   DY +AD+ AAP+   DQW   PDAQWG   V PA +A PA
Subjt:  VDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAPL-AVDQW--APDAQWGASDVVPAAAAAPA

Q08682 40S ribosomal protein Sa-11.1e-11577.37Show/hide
Query:  MAT--GTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA
        MAT    +  QLSQKEAD++MM AAEVHLGTKNCN+QMERYVFKRRNDGIYI NLGKTW+KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA
Subjt:  MAT--GTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA

Query:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD
        +AIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG KWD
Subjt:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD

Query:  VMVDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAP------LAVDQWA----PDAQWGASDVVPAAAAAPASN
        VMVDLFFYREPEE K E+E+   P     A++GA P      +  DQW     PDA W      P +AA  A++
Subjt:  VMVDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAP------LAVDQWA----PDAQWGASDVVPAAAAAPASN

Arabidopsis top hitse value%identityAlignment
AT1G72370.1 40s ribosomal protein SA7.9e-11777.37Show/hide
Query:  MAT--GTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA
        MAT    +  QLSQKEAD++MM AAEVHLGTKNCN+QMERYVFKRRNDGIYI NLGKTW+KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA
Subjt:  MAT--GTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA

Query:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD
        +AIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG KWD
Subjt:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD

Query:  VMVDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAP------LAVDQWA----PDAQWGASDVVPAAAAAPASN
        VMVDLFFYREPEE K E+E+   P     A++GA P      +  DQW     PDA W      P +AA  A++
Subjt:  VMVDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAP------LAVDQWA----PDAQWGASDVVPAAAAAPASN

AT1G72370.2 40s ribosomal protein SA7.9e-11777.37Show/hide
Query:  MAT--GTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA
        MAT    +  QLSQKEAD++MM AAEVHLGTKNCN+QMERYVFKRRNDGIYI NLGKTW+KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA
Subjt:  MAT--GTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA

Query:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD
        +AIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG KWD
Subjt:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD

Query:  VMVDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAP------LAVDQWA----PDAQWGASDVVPAAAAAPASN
        VMVDLFFYREPEE K E+E+   P     A++GA P      +  DQW     PDA W      P +AA  A++
Subjt:  VMVDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAP------LAVDQWA----PDAQWGASDVVPAAAAAPASN

AT3G04770.1 40s ribosomal protein SA B1.2e-10490.91Show/hide
Query:  TAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGR
        TA RQ+S+KEADIQMML+A+VHLGTKNCN+QMERYVFKRR+DGIYIINLGKTWDKLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTG +AIAGR
Subjt:  TAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGR

Query:  HTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVD
        HTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI A  KWDVMV+
Subjt:  HTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVD

AT3G04770.2 40s ribosomal protein SA B6.7e-11679.92Show/hide
Query:  TAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGR
        TA RQ+S+KEADIQMML+A+VHLGTKNCN+QMERYVFKRR+DGIYIINLGKTWDKLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTG +AIAGR
Subjt:  TAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGR

Query:  HTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDLF
        HTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI A  KWDVMVDLF
Subjt:  HTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDLF

Query:  FYREPEEAKEE-EEEAVAPPDYGIADFGAAPLAVDQWA----PDAQWGASDVVPAAAAAPASNV
        FYREPEEAK+E +EEA    DYG+       +  DQW      DA W + +V    +AAPA  V
Subjt:  FYREPEEAKEE-EEEAVAPPDYGIADFGAAPLAVDQWA----PDAQWGASDVVPAAAAAPASNV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTGGAACAGCGCAGCGTCAACTCTCGCAGAAGGAGGCTGACATTCAGATGATGTTAGCCGCCGAGGTTCATCTAGGAACCAAAAATTGCAATTTCCAAATGGA
ACGATACGTTTTCAAGCGCCGGAACGATGGAATATACATTATTAACCTTGGTAAAACATGGGATAAACTTCAGATGGCTGCCAGAGTTATTGTGGCAATTGAGAATCCTC
AGGACATTATTGTTCAGTCTGCCAGGCCTTATGGTCAGAGAGCTGTTTTGAAGTTTGCACAATACACTGGTGCTCATGCTATAGCTGGGAGGCACACCCCTGGAACGTTC
ACCAACCAGCTTCAGACCTCATTCAATGAGCCACGTCTTTTGATACTTACTGATCCTAGAACTGACCATCAGCCCATCAAGGAAGGTGCTCTTGGAAACATTCCTACAAT
TGCTTTTTGCGACACTGATTCGCCAATGCGGTATGTTGATATTGGGATTCCCGCTAATAACAAAGGGAAACATAGCATAGGATGTCTATTCTGGCTTTTGGCGAGGATGG
TTTTGCAGATGCGTGGAACAATCCGTGCTGGGCACAAATGGGATGTGATGGTTGATTTGTTTTTCTATCGGGAGCCTGAGGAGGCTAAGGAGGAAGAAGAAGAGGCTGTT
GCACCCCCTGATTATGGTATTGCAGATTTTGGTGCTGCTCCGCTTGCTGTAGATCAATGGGCTCCTGATGCTCAATGGGGTGCCTCTGATGTGGTTCCAGCTGCTGCTGC
TGCTCCAGCTTCTAATGTTGAATGGGCCCAAGAGCCA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACTGGAACAGCGCAGCGTCAACTCTCGCAGAAGGAGGCTGACATTCAGATGATGTTAGCCGCCGAGGTTCATCTAGGAACCAAAAATTGCAATTTCCAAATGGA
ACGATACGTTTTCAAGCGCCGGAACGATGGAATATACATTATTAACCTTGGTAAAACATGGGATAAACTTCAGATGGCTGCCAGAGTTATTGTGGCAATTGAGAATCCTC
AGGACATTATTGTTCAGTCTGCCAGGCCTTATGGTCAGAGAGCTGTTTTGAAGTTTGCACAATACACTGGTGCTCATGCTATAGCTGGGAGGCACACCCCTGGAACGTTC
ACCAACCAGCTTCAGACCTCATTCAATGAGCCACGTCTTTTGATACTTACTGATCCTAGAACTGACCATCAGCCCATCAAGGAAGGTGCTCTTGGAAACATTCCTACAAT
TGCTTTTTGCGACACTGATTCGCCAATGCGGTATGTTGATATTGGGATTCCCGCTAATAACAAAGGGAAACATAGCATAGGATGTCTATTCTGGCTTTTGGCGAGGATGG
TTTTGCAGATGCGTGGAACAATCCGTGCTGGGCACAAATGGGATGTGATGGTTGATTTGTTTTTCTATCGGGAGCCTGAGGAGGCTAAGGAGGAAGAAGAAGAGGCTGTT
GCACCCCCTGATTATGGTATTGCAGATTTTGGTGCTGCTCCGCTTGCTGTAGATCAATGGGCTCCTGATGCTCAATGGGGTGCCTCTGATGTGGTTCCAGCTGCTGCTGC
TGCTCCAGCTTCTAATGTTGAATGGGCCCAAGAGCCA
Protein sequenceShow/hide protein sequence
MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTF
TNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEEEEEAV
APPDYGIADFGAAPLAVDQWAPDAQWGASDVVPAAAAAPASNVEWAQEP