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MS012695 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012695
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionsigma intracellular receptor 2-like
Genome locationscaffold63:2705749..2706672
RNA-Seq ExpressionMS012695
SyntenyMS012695
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577250.1 Sigma intracellular receptor 2, partial [Cucurbita argyrosperma subsp. sororia]1.4e-2348.15Show/hide
Query:  WNSVLFVSFLVHALAPPLIGAQILVPRAVFPDFVIDLKRQYI---------------------------------LYAISAGKPKLCMHTTCLIYGVSLF
        ++SVLFVSF VHA+APPLI AQ+L+P A+FPD +ID K  YI                                 LYAI A K  L  HTTCLIYGVSLF
Subjt:  WNSVLFVSFLVHALAPPLIGAQILVPRAVFPDFVIDLKRQYI---------------------------------LYAISAGKPKLCMHTTCLIYGVSLF

Query:  SAMSAITAELIGSKRASDTHIS---PFLGFGTFSHPRGLLPLHSGNITTTGGITPSISRKKK
        SAM+AI AELIGS+RAS   +    PFLG G  +  RGL+P  S    T   + PSI+ KKK
Subjt:  SAMSAITAELIGSKRASDTHIS---PFLGFGTFSHPRGLLPLHSGNITTTGGITPSISRKKK

XP_004149168.1 sigma intracellular receptor 2 [Cucumis sativus]1.2e-2248.47Show/hide
Query:  WNSVLFVSFLVHALAPPLIGAQILVPRAVFPDFVIDLKRQYI---------------------------------LYAISAGKPKLCMHTTCLIYGVSLF
        ++SVLFV FLVHALAPPLI AQ+L+P+ +FP+  I LK +YI                                 LYAI   K  L  HTTCLIYGVSLF
Subjt:  WNSVLFVSFLVHALAPPLIGAQILVPRAVFPDFVIDLKRQYI---------------------------------LYAISAGKPKLCMHTTCLIYGVSLF

Query:  SAMSAITAELIGSKRASD---THISPFLGFGTFSHPRGLLPLHSGNITTTGGITPSISRKKKA
        SAM+AI AELIGS+RAS    T   PFL  G  +  RGLLP  +   TT  G  PSI+ KKKA
Subjt:  SAMSAITAELIGSKRASD---THISPFLGFGTFSHPRGLLPLHSGNITTTGGITPSISRKKKA

XP_008453730.1 PREDICTED: transmembrane protein 97-like [Cucumis melo]6.1e-2753.66Show/hide
Query:  WNSVLFVSFLVHALAPPLIGAQILVPRAVFPDFVIDLKRQYI---------------------------------LYAISAGKPKLCMHTTCLIYGVSLF
        +NSVLFV FLVHALAPPLIGAQ+L+P+ +FPD +I  K QYI                                 LYAIS  K  L  HTTCLIYGVSLF
Subjt:  WNSVLFVSFLVHALAPPLIGAQILVPRAVFPDFVIDLKRQYI---------------------------------LYAISAGKPKLCMHTTCLIYGVSLF

Query:  SAMSAITAELIGSKRASD---THISPFLGFGTFSHPRGLLPLHSGNITTTG-GITPSISRKKKA
        SAM+AI AELIGS+RAS    T  SPFL  G F+  RGLLP H    TTTG G  PSI+ KKKA
Subjt:  SAMSAITAELIGSKRASD---THISPFLGFGTFSHPRGLLPLHSGNITTTG-GITPSISRKKKA

XP_023553153.1 sigma intracellular receptor 2-like [Cucurbita pepo subsp. pepo]4.8e-2448.77Show/hide
Query:  WNSVLFVSFLVHALAPPLIGAQILVPRAVFPDFVIDLKRQYI---------------------------------LYAISAGKPKLCMHTTCLIYGVSLF
        ++SVLFVSF VHA+APPLIGAQ+L+P A+FPD +ID K  YI                                 LYAI A K  L  HTTCLIYGVSLF
Subjt:  WNSVLFVSFLVHALAPPLIGAQILVPRAVFPDFVIDLKRQYI---------------------------------LYAISAGKPKLCMHTTCLIYGVSLF

Query:  SAMSAITAELIGSKRASDTHIS---PFLGFGTFSHPRGLLPLHSGNITTTGGITPSISRKKK
        SAM+AI AELIGS+RAS   +    PFLG G  +  RGL+P  S    T   + PSI+ KKK
Subjt:  SAMSAITAELIGSKRASDTHIS---PFLGFGTFSHPRGLLPLHSGNITTTGGITPSISRKKK

XP_038876784.1 sigma intracellular receptor 2-like [Benincasa hispida]1.1e-2549.08Show/hide
Query:  WNSVLFVSFLVHALAPPLIGAQILVPRAVFPDFVIDLKRQYI---------------------------------LYAISAGKPKLCMHTTCLIYGVSLF
        ++S+LFVSFLVHALAPPLIGAQ+L+P+ +FPD +I  K  YI                                 LYAISA KP L  HTTCLIYGVSLF
Subjt:  WNSVLFVSFLVHALAPPLIGAQILVPRAVFPDFVIDLKRQYI---------------------------------LYAISAGKPKLCMHTTCLIYGVSLF

Query:  SAMSAITAELIGSKRASDTHIS---PFLGFGTFSHPRGLLPLHSGNITTTGGITPSISRKKKA
        SAM+AI AEL+GS++AS   ++   PFLG G F+  RGL+P  S       G  PSI+ KKKA
Subjt:  SAMSAITAELIGSKRASDTHIS---PFLGFGTFSHPRGLLPLHSGNITTTGGITPSISRKKKA

TrEMBL top hitse value%identityAlignment
A0A0A0KZE5 EXPERA domain-containing protein5.7e-2348.47Show/hide
Query:  WNSVLFVSFLVHALAPPLIGAQILVPRAVFPDFVIDLKRQYI---------------------------------LYAISAGKPKLCMHTTCLIYGVSLF
        ++SVLFV FLVHALAPPLI AQ+L+P+ +FP+  I LK +YI                                 LYAI   K  L  HTTCLIYGVSLF
Subjt:  WNSVLFVSFLVHALAPPLIGAQILVPRAVFPDFVIDLKRQYI---------------------------------LYAISAGKPKLCMHTTCLIYGVSLF

Query:  SAMSAITAELIGSKRASD---THISPFLGFGTFSHPRGLLPLHSGNITTTGGITPSISRKKKA
        SAM+AI AELIGS+RAS    T   PFL  G  +  RGLLP  +   TT  G  PSI+ KKKA
Subjt:  SAMSAITAELIGSKRASD---THISPFLGFGTFSHPRGLLPLHSGNITTTGGITPSISRKKKA

A0A1S3BWY8 transmembrane protein 97-like2.9e-2753.66Show/hide
Query:  WNSVLFVSFLVHALAPPLIGAQILVPRAVFPDFVIDLKRQYI---------------------------------LYAISAGKPKLCMHTTCLIYGVSLF
        +NSVLFV FLVHALAPPLIGAQ+L+P+ +FPD +I  K QYI                                 LYAIS  K  L  HTTCLIYGVSLF
Subjt:  WNSVLFVSFLVHALAPPLIGAQILVPRAVFPDFVIDLKRQYI---------------------------------LYAISAGKPKLCMHTTCLIYGVSLF

Query:  SAMSAITAELIGSKRASD---THISPFLGFGTFSHPRGLLPLHSGNITTTG-GITPSISRKKKA
        SAM+AI AELIGS+RAS    T  SPFL  G F+  RGLLP H    TTTG G  PSI+ KKKA
Subjt:  SAMSAITAELIGSKRASD---THISPFLGFGTFSHPRGLLPLHSGNITTTG-GITPSISRKKKA

A0A5D3CY30 Transmembrane protein 97-like2.9e-2753.66Show/hide
Query:  WNSVLFVSFLVHALAPPLIGAQILVPRAVFPDFVIDLKRQYI---------------------------------LYAISAGKPKLCMHTTCLIYGVSLF
        +NSVLFV FLVHALAPPLIGAQ+L+P+ +FPD +I  K QYI                                 LYAIS  K  L  HTTCLIYGVSLF
Subjt:  WNSVLFVSFLVHALAPPLIGAQILVPRAVFPDFVIDLKRQYI---------------------------------LYAISAGKPKLCMHTTCLIYGVSLF

Query:  SAMSAITAELIGSKRASD---THISPFLGFGTFSHPRGLLPLHSGNITTTG-GITPSISRKKKA
        SAM+AI AELIGS+RAS    T  SPFL  G F+  RGLLP H    TTTG G  PSI+ KKKA
Subjt:  SAMSAITAELIGSKRASD---THISPFLGFGTFSHPRGLLPLHSGNITTTG-GITPSISRKKKA

A0A6J1EU13 sigma intracellular receptor 2-like3.7e-2246.91Show/hide
Query:  WNSVLFVSFLVHALAPPLIGAQILVPRAVFPDFVIDLKRQYI---------------------------------LYAISAGKPKLCMHTTCLIYGVSLF
        ++SVLFV   VHA+APPLIGAQ+L+P A+FPD ++D K  Y+                                 LYAI A K  L  HTTCLIYGVSLF
Subjt:  WNSVLFVSFLVHALAPPLIGAQILVPRAVFPDFVIDLKRQYI---------------------------------LYAISAGKPKLCMHTTCLIYGVSLF

Query:  SAMSAITAELIGSKRASDTHIS---PFLGFGTFSHPRGLLPLHSGNITTTGGITPSISRKKK
        SAM AI AELIGS+RAS   +    PFLG G  +  RGLLP  S    T   + PSI+ KKK
Subjt:  SAMSAITAELIGSKRASDTHIS---PFLGFGTFSHPRGLLPLHSGNITTTGGITPSISRKKK

A0A6J1JCI5 sigma intracellular receptor 2-like1.7e-2246.91Show/hide
Query:  WNSVLFVSFLVHALAPPLIGAQILVPRAVFPDFVIDLKRQYI---------------------------------LYAISAGKPKLCMHTTCLIYGVSLF
        ++SVLFVS  VHA+APPLIGAQ+L+P A+FPD ++D K  Y+                                 LYAI A K  L  HTTCLIYGVSLF
Subjt:  WNSVLFVSFLVHALAPPLIGAQILVPRAVFPDFVIDLKRQYI---------------------------------LYAISAGKPKLCMHTTCLIYGVSLF

Query:  SAMSAITAELIGSKRASDTHIS---PFLGFGTFSHPRGLLPLHSGNITTTGGITPSISRKKK
        +AM AI AELIGS+RAS   +    PFLG G  +  RGLLP  S    T   + PSI+ KKK
Subjt:  SAMSAITAELIGSKRASDTHIS---PFLGFGTFSHPRGLLPLHSGNITTTGGITPSISRKKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G05210.1 Transmembrane protein 97, predicted4.1e-1333.33Show/hide
Query:  LFVSFLVHALAPPLIGAQILVPRAVFPDFVIDLKRQYI---------------------------------LYAISAGKPKLCMHTTCLIYGVSLFSAMS
        LFV F+  A+  PLI  Q  +P  ++P F+ DLK +YI                                 +YAI AGK      TTCL+YG SL ++M+
Subjt:  LFVSFLVHALAPPLIGAQILVPRAVFPDFVIDLKRQYI---------------------------------LYAISAGKPKLCMHTTCLIYGVSLFSAMS

Query:  AITAELIGSKRASDTHIS---PFLGFGTFSHPRGLLPLHSGNITTTGGITPSISRKKKA
        AI  ++IGS +ASD  +    PF+GFG  +  RGL+   + N  ++G  +  + R+K A
Subjt:  AITAELIGSKRASDTHIS---PFLGFGTFSHPRGLLPLHSGNITTTGGITPSISRKKKA

AT1G05220.1 Transmembrane protein 97, predicted2.6e-0427.34Show/hide
Query:  NSVLFVSFLVHALAPPLIGAQILVPRAVFPDFVIDLKRQYI---------------------------------LYAISAGKPKLCMHTTCLIYGVSLFS
        N  LF  F + A+  PL+  QIL P  ++P  + DLK  Y                                  +YAI   K      TT L+YG S  +
Subjt:  NSVLFVSFLVHALAPPLIGAQILVPRAVFPDFVIDLKRQYI---------------------------------LYAISAGKPKLCMHTTCLIYGVSLFS

Query:  AMSAITAELIGSKRASDTHI---SPFLGFGTFSHPRGLL
        +M+AI  ++IGS++ ++  +    PF+G    +  RGL+
Subjt:  AMSAITAELIGSKRASDTHI---SPFLGFGTFSHPRGLL

AT1G05220.2 Transmembrane protein 97, predicted2.6e-0427.34Show/hide
Query:  NSVLFVSFLVHALAPPLIGAQILVPRAVFPDFVIDLKRQYI---------------------------------LYAISAGKPKLCMHTTCLIYGVSLFS
        N  LF  F + A+  PL+  QIL P  ++P  + DLK  Y                                  +YAI   K      TT L+YG S  +
Subjt:  NSVLFVSFLVHALAPPLIGAQILVPRAVFPDFVIDLKRQYI---------------------------------LYAISAGKPKLCMHTTCLIYGVSLFS

Query:  AMSAITAELIGSKRASDTHI---SPFLGFGTFSHPRGLL
        +M+AI  ++IGS++ ++  +    PF+G    +  RGL+
Subjt:  AMSAITAELIGSKRASDTHI---SPFLGFGTFSHPRGLL

AT2G32380.1 Transmembrane protein 97, predicted2.2e-1130.86Show/hide
Query:  NSVLFVSFLVHALAPPLIGAQILVPRAVFPDFVIDLKRQYI---------------------------------LYAISAGKPKLCMHTTCLIYGVSLFS
        ++VLF+ F + A+  PLI  Q  +P  +FP F++DL R YI                                 +YAI AGK      TT ++YG S+ +
Subjt:  NSVLFVSFLVHALAPPLIGAQILVPRAVFPDFVIDLKRQYI---------------------------------LYAISAGKPKLCMHTTCLIYGVSLFS

Query:  AMSAITAELIGSKRASDTHIS---PFLGFGTFSHPRGLLPLHSGNITTTGGITPSISRKKKA
        +M+AI  E+IGS +AS+  +    PF+G G  +  RGLL   + +    G     ++R+K+A
Subjt:  AMSAITAELIGSKRASDTHIS---PFLGFGTFSHPRGLLPLHSGNITTTGGITPSISRKKKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACATCTCAAAATCACGAACCATGGAACTCAGTTTTATTTGTGTCCTTCCTCGTACACGCCTTGGCGCCGCCTCTCATTGGTGCCCAGATATTGGTCCCGCGAGCCGTATT
CCCCGATTTTGTGATTGATCTGAAGAGGCAGTACATTCTCTACGCCATCTCCGCTGGGAAGCCGAAGCTGTGTATGCACACCACTTGTTTGATCTATGGCGTCTCCCTCT
TCTCTGCTATGAGTGCTATAACAGCTGAATTGATAGGGTCAAAGCGAGCATCTGATACACATATATCTCCCTTTCTTGGGTTTGGGACTTTTAGCCACCCACGCGGGCTG
CTGCCGCTGCACTCCGGCAACATTACCACCACCGGCGGCATTACACCCTCCATAAGCAGAAAAAAGAAAGCT
mRNA sequenceShow/hide mRNA sequence
ACATCTCAAAATCACGAACCATGGAACTCAGTTTTATTTGTGTCCTTCCTCGTACACGCCTTGGCGCCGCCTCTCATTGGTGCCCAGATATTGGTCCCGCGAGCCGTATT
CCCCGATTTTGTGATTGATCTGAAGAGGCAGTACATTCTCTACGCCATCTCCGCTGGGAAGCCGAAGCTGTGTATGCACACCACTTGTTTGATCTATGGCGTCTCCCTCT
TCTCTGCTATGAGTGCTATAACAGCTGAATTGATAGGGTCAAAGCGAGCATCTGATACACATATATCTCCCTTTCTTGGGTTTGGGACTTTTAGCCACCCACGCGGGCTG
CTGCCGCTGCACTCCGGCAACATTACCACCACCGGCGGCATTACACCCTCCATAAGCAGAAAAAAGAAAGCT
Protein sequenceShow/hide protein sequence
TSQNHEPWNSVLFVSFLVHALAPPLIGAQILVPRAVFPDFVIDLKRQYILYAISAGKPKLCMHTTCLIYGVSLFSAMSAITAELIGSKRASDTHISPFLGFGTFSHPRGL
LPLHSGNITTTGGITPSISRKKKA