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MS012698 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS012698
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGPI-anchor transamidase isoform X1
Genome locationscaffold63:2720036..2720248
RNA-Seq ExpressionMS012698
SyntenyMS012698
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062564.1 GPI-anchor transamidase isoform X1 [Cucumis melo var. makuwa]2.2e-0440.85Show/hide
Query:  CMLCLNAGEDLQNLFSHCSYCRNILEWLLQVFGCLWVFDWKVEKNIFQLRCSQSFKKNAKIPWIYIAKSIL
        C LCL  GEDLQ LF+ C Y     E LL +FG  W FD     NI Q+    S K+  ++ W  ++K++L
Subjt:  CMLCLNAGEDLQNLFSHCSYCRNILEWLLQVFGCLWVFDWKVEKNIFQLRCSQSFKKNAKIPWIYIAKSIL
TrEMBL top hitse value%identityAlignment
A0A5A7V5N8 GPI-anchor transamidase isoform X11.1e-0440.85Show/hide
Query:  CMLCLNAGEDLQNLFSHCSYCRNILEWLLQVFGCLWVFDWKVEKNIFQLRCSQSFKKNAKIPWIYIAKSIL
        C LCL  GEDLQ LF+ C Y     E LL +FG  W FD     NI Q+    S K+  ++ W  ++K++L
Subjt:  CMLCLNAGEDLQNLFSHCSYCRNILEWLLQVFGCLWVFDWKVEKNIFQLRCSQSFKKNAKIPWIYIAKSIL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGCATGTTGTGCCTAAATGCGGGGGAGGATCTTCAGAATTTGTTTTCTCATTGCTCCTATTGTAGGAATATTTTGGAATGGTTGCTGCAAGTCTTTGGATGTTTGTGGGT
GTTCGATTGGAAGGTTGAAAAAAATATTTTCCAACTTCGTTGCAGTCAGAGCTTTAAGAAGAACGCAAAAATTCCATGGATATATATAGCCAAGTCAATTTTG
mRNA sequenceShow/hide mRNA sequence
TGCATGTTGTGCCTAAATGCGGGGGAGGATCTTCAGAATTTGTTTTCTCATTGCTCCTATTGTAGGAATATTTTGGAATGGTTGCTGCAAGTCTTTGGATGTTTGTGGGT
GTTCGATTGGAAGGTTGAAAAAAATATTTTCCAACTTCGTTGCAGTCAGAGCTTTAAGAAGAACGCAAAAATTCCATGGATATATATAGCCAAGTCAATTTTG
Protein sequenceShow/hide protein sequence
CMLCLNAGEDLQNLFSHCSYCRNILEWLLQVFGCLWVFDWKVEKNIFQLRCSQSFKKNAKIPWIYIAKSIL